RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 CLIP2Q9UDT6 1046 aa13.24□□□□□ -0.29
SNX13-202ENST00000409604 ITSN1Q15811 1721 aa13.23□□□□□ -0.29
SNX13-202ENST00000409604 H7C1D1 291 aa13.23□□□□□ -0.29
SNX13-202ENST00000409604 CYP2E1P05181 493 aaPredicted RBP13.23□□□□□ -0.29
SNX13-202ENST00000409604 KLHL10Q6JEL2 608 aa13.23□□□□□ -0.29
SNX13-202ENST00000409604 MASTLQ96GX5 879 aa13.23□□□□□ -0.29
SNX13-202ENST00000409604 KAZALD1Q96I82 304 aa13.23□□□□□ -0.29
SNX13-202ENST00000409604 BSDC1Q9NW68 430 aaPredicted RBP13.23□□□□□ -0.29
SNX13-202ENST00000409604 V9GY48 417 aaPredicted RBP13.23□□□□□ -0.29
SNX13-202ENST00000409604 SYCE3A1L190 88 aa13.23□□□□□ -0.29
SNX13-202ENST00000409604 PTPDC1A2A3K4 754 aa13.23□□□□□ -0.29
SNX13-202ENST00000409604 NRDCO43847 1150 aa13.23□□□□□ -0.29
SNX13-202ENST00000409604 GYS1P13807 737 aa13.23□□□□□ -0.29
SNX13-202ENST00000409604 NPR1P16066 1061 aa13.23□□□□□ -0.29
SNX13-202ENST00000409604 FCHSD1Q86WN1 690 aa13.23□□□□□ -0.29
SNX13-202ENST00000409604 PIM2Q9P1W9 311 aa13.23□□□□□ -0.29
SNX13-202ENST00000409604 LIG1P18858 919 aa13.23□□□□□ -0.29
SNX13-202ENST00000409604 ADD1P35611 737 aaKnown RBP13.23□□□□□ -0.29
SNX13-202ENST00000409604 DNM1Q05193 864 aaKnown RBP13.23□□□□□ -0.29
SNX13-202ENST00000409604 PRAMEF18Q5VWM3 479 aa13.23□□□□□ -0.29
SNX13-202ENST00000409604 ZNF34Q8IZ26 560 aa13.23□□□□□ -0.29
SNX13-202ENST00000409604 CNPY2Q9Y2B0 182 aa13.23□□□□□ -0.29
SNX13-202ENST00000409604 MAST3O60307 1309 aa13.22□□□□□ -0.29
SNX13-202ENST00000409604 GDF11O95390 407 aa13.22□□□□□ -0.29
SNX13-202ENST00000409604 CD2BP2O95400 341 aaKnown RBP13.22□□□□□ -0.29
SNX13-202ENST00000409604 PLCG2P16885 1265 aa13.22□□□□□ -0.29
SNX13-202ENST00000409604 SKOR2Q2VWA4 1001 aaPredicted RBP13.22□□□□□ -0.29
SNX13-202ENST00000409604 PI4K2BQ8TCG2 481 aa13.22□□□□□ -0.29
SNX13-202ENST00000409604 NOL7Q9UMY1 257 aaKnown RBP13.22□□□□□ -0.29
SNX13-202ENST00000409604 CYP2D6P10635 497 aa13.22□□□□□ -0.29
SNX13-202ENST00000409604 HSP90AA4PQ58FG1 418 aa13.22□□□□□ -0.29
SNX13-202ENST00000409604 RAD50Q92878 1312 aa13.22□□□□□ -0.29
SNX13-202ENST00000409604 CYP21A2P08686 494 aa13.22□□□□□ -0.29
SNX13-202ENST00000409604 PTMSP20962 102 aa13.22□□□□□ -0.29
SNX13-202ENST00000409604 MECOMQ03112 1051 aa13.22□□□□□ -0.29
SNX13-202ENST00000409604 ATG9AQ7Z3C6 839 aa13.22□□□□□ -0.29
SNX13-202ENST00000409604 TNMDQ9H2S6 317 aa13.22□□□□□ -0.29
SNX13-202ENST00000409604 TDRD3Q9H7E2 651 aaKnown RBP13.22□□□□□ -0.29
SNX13-202ENST00000409604 GNAT2P19087 354 aa13.21□□□□□ -0.29
SNX13-202ENST00000409604 KIF5BP33176 963 aa13.21□□□□□ -0.29
SNX13-202ENST00000409604 USH1GQ495M9 461 aa13.21□□□□□ -0.29
SNX13-202ENST00000409604 SPC24Q8NBT2 197 aa13.21□□□□□ -0.29
SNX13-202ENST00000409604 SLC44A5Q8NCS7 719 aa13.21□□□□□ -0.29
SNX13-202ENST00000409604 CNNM2Q9H8M5 875 aa13.21□□□□□ -0.29
SNX13-202ENST00000409604 TNNI2P48788 182 aa13.21□□□□□ -0.29
SNX13-202ENST00000409604 NAPAP54920 295 aa13.21□□□□□ -0.29
SNX13-202ENST00000409604 NTSR2O95665 410 aa13.21□□□□□ -0.3
SNX13-202ENST00000409604 FBXO41Q8TF61 875 aa13.21□□□□□ -0.3
SNX13-202ENST00000409604 UBA5Q9GZZ9 404 aa13.21□□□□□ -0.3
SNX13-202ENST00000409604 SAMM50Q9Y512 469 aa13.21□□□□□ -0.3
SNX13-202ENST00000409604 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.21□□□□□ -0.3
SNX13-202ENST00000409604 CARMIL3Q8ND23 1372 aa13.21□□□□□ -0.3
SNX13-202ENST00000409604 FRMPD2Q68DX3 1309 aaPredicted RBP13.21□□□□□ -0.3
SNX13-202ENST00000409604 PPARAQ07869 468 aa13.2□□□□□ -0.3
SNX13-202ENST00000409604 TXNRD3Q86VQ6 643 aa13.2□□□□□ -0.3
SNX13-202ENST00000409604 NAP1L5Q96NT1 182 aaPredicted RBP13.2□□□□□ -0.3
SNX13-202ENST00000409604 CD209Q9NNX6 404 aa13.2□□□□□ -0.3
SNX13-202ENST00000409604 RPS6KB1P23443 525 aa13.2□□□□□ -0.3
SNX13-202ENST00000409604 TXLNAP40222 546 aa13.2□□□□□ -0.3
SNX13-202ENST00000409604 PDGFDQ9GZP0 370 aaPredicted RBP13.2□□□□□ -0.3
SNX13-202ENST00000409604 KCNJ14Q9UNX9 436 aa13.2□□□□□ -0.3
SNX13-202ENST00000409604 DPEP1P16444 411 aa13.2□□□□□ -0.3
SNX13-202ENST00000409604 FAM84BQ96KN1 310 aaPredicted RBP13.2□□□□□ -0.3
SNX13-202ENST00000409604 LEMD3Q9Y2U8 911 aa13.2□□□□□ -0.3
SNX13-202ENST00000409604 USP42Q9H9J4 1324 aaKnown RBP13.2□□□□□ -0.3
SNX13-202ENST00000409604 PATL2C9JE40 543 aaKnown RBP13.2□□□□□ -0.3
SNX13-202ENST00000409604 CIAO1O76071 339 aa13.2□□□□□ -0.3
SNX13-202ENST00000409604 CCDC93Q567U6 631 aa13.2□□□□□ -0.3
SNX13-202ENST00000409604 TANGO6Q9C0B7 1094 aa13.2□□□□□ -0.3
SNX13-202ENST00000409604 HMGN5P82970 282 aaKnown RBP13.19□□□□□ -0.3
SNX13-202ENST00000409604 PKP1Q13835 747 aa13.19□□□□□ -0.3
SNX13-202ENST00000409604 DPY19L2Q6NUT2 758 aa13.19□□□□□ -0.3
SNX13-202ENST00000409604 TBC1D22AQ8WUA7 517 aa13.19□□□□□ -0.3
SNX13-202ENST00000409604 WASF1Q92558 559 aa13.19□□□□□ -0.3
SNX13-202ENST00000409604 CPVLQ9H3G5 476 aa13.19□□□□□ -0.3
SNX13-202ENST00000409604 CFAP45Q9UL16 551 aa13.19□□□□□ -0.3
SNX13-202ENST00000409604 JMYQ8N9B5 988 aa13.19□□□□□ -0.3
SNX13-202ENST00000409604 TAOK3Q9H2K8 898 aa13.19□□□□□ -0.3
SNX13-202ENST00000409604 RIPOR2Q9Y4F9 1068 aa13.19□□□□□ -0.3
SNX13-202ENST00000409604 ZNF827Q17R98 1081 aa13.19□□□□□ -0.3
SNX13-202ENST00000409604 AKNAD1Q5T1N1 836 aa13.19□□□□□ -0.3
SNX13-202ENST00000409604 SUPT20HQ8NEM7 779 aa13.19□□□□□ -0.3
SNX13-202ENST00000409604 CSRNP1Q96S65 589 aa13.19□□□□□ -0.3
SNX13-202ENST00000409604 ZBTB21Q9ULJ3 1066 aa13.19□□□□□ -0.3
SNX13-202ENST00000409604 NF2P35240 595 aa13.18□□□□□ -0.3
SNX13-202ENST00000409604 SPECC1Q5M775 1068 aa13.18□□□□□ -0.3
SNX13-202ENST00000409604 BRIP1Q9BX63 1249 aa13.18□□□□□ -0.3
SNX13-202ENST00000409604 ANGEL1Q9UNK9 670 aaKnown RBP13.18□□□□□ -0.3
SNX13-202ENST00000409604 RGPD8O14715 1765 aaPredicted RBP13.18□□□□□ -0.3
SNX13-202ENST00000409604 SORBS3O60504 671 aa13.18□□□□□ -0.3
SNX13-202ENST00000409604 IDEP14735 1019 aa13.18□□□□□ -0.3
SNX13-202ENST00000409604 ADRA2BP18089 450 aa13.18□□□□□ -0.3
SNX13-202ENST00000409604 SYT1P21579 422 aa13.18□□□□□ -0.3
SNX13-202ENST00000409604 KIAA2012Q0VF49 1180 aa13.18□□□□□ -0.3
SNX13-202ENST00000409604 CCDC47Q96A33 483 aaKnown RBP13.18□□□□□ -0.3
SNX13-202ENST00000409604 RNF181Q9P0P0 153 aa13.18□□□□□ -0.3
SNX13-202ENST00000409604 BAG4O95429 457 aaKnown RBP13.18□□□□□ -0.3
SNX13-202ENST00000409604 HSPA4P34932 840 aa13.18□□□□□ -0.3
SNX13-202ENST00000409604 SLC1A4P43007 532 aa13.18□□□□□ -0.3
SNX13-202ENST00000409604 ME3Q16798 604 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms