RNA–Protein interactions for RNA: ENST00000409292.5

LSM5-202, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-202ENST00000409292 FRAT2O75474 233 aaPredicted RBP9.8□□□□□ -0.84
LSM5-202ENST00000409292 GTF2A2P52657 109 aa9.8□□□□□ -0.84
LSM5-202ENST00000409292 MAP3K9P80192 1104 aa9.8□□□□□ -0.84
LSM5-202ENST00000409292 CRHR2Q13324 411 aa9.8□□□□□ -0.84
LSM5-202ENST00000409292 RASA3Q14644 834 aa9.8□□□□□ -0.84
LSM5-202ENST00000409292 SLC9C1Q4G0N8 1177 aa9.8□□□□□ -0.84
LSM5-202ENST00000409292 HABP4Q5JVS0 413 aaKnown RBP9.8□□□□□ -0.84
LSM5-202ENST00000409292 ADGRD1Q6QNK2 874 aa9.8□□□□□ -0.84
LSM5-202ENST00000409292 LDHAL6AQ6ZMR3 332 aa9.8□□□□□ -0.84
LSM5-202ENST00000409292 VPS37DQ86XT2 251 aa9.8□□□□□ -0.84
LSM5-202ENST00000409292 ZNF454Q8N9F8 522 aa9.8□□□□□ -0.84
LSM5-202ENST00000409292 CD99L2Q8TCZ2 262 aa9.8□□□□□ -0.84
LSM5-202ENST00000409292 WTIPA6NIX2 430 aaPredicted RBP9.79□□□□□ -0.84
LSM5-202ENST00000409292 IGF2BP3O00425 579 aaKnown RBP eCLIP9.79□□□□□ -0.84
LSM5-202ENST00000409292 PLIN1O60240 522 aa9.79□□□□□ -0.84
LSM5-202ENST00000409292 TAF5LO75529 589 aa9.79□□□□□ -0.84
LSM5-202ENST00000409292 IL1R1P14778 569 aa9.79□□□□□ -0.84
LSM5-202ENST00000409292 TAF1CQ15572 869 aaPredicted RBP9.79□□□□□ -0.84
LSM5-202ENST00000409292 CCDC27Q2M243 656 aa9.79□□□□□ -0.84
LSM5-202ENST00000409292 NBPF12Q5TAG4 269 aaPredicted RBP9.79□□□□□ -0.84
LSM5-202ENST00000409292 TSPYL6Q8N831 410 aa9.79□□□□□ -0.84
LSM5-202ENST00000409292 SPRYD3Q8NCJ5 442 aa9.79□□□□□ -0.84
LSM5-202ENST00000409292 TSR2Q969E8 191 aaKnown RBP9.79□□□□□ -0.84
LSM5-202ENST00000409292 ARMC5Q96C12 935 aa9.79□□□□□ -0.84
LSM5-202ENST00000409292 OPTNQ96CV9 577 aa9.79□□□□□ -0.84
LSM5-202ENST00000409292 CLMNQ96JQ2 1002 aa9.79□□□□□ -0.84
LSM5-202ENST00000409292 C9orf78Q9NZ63 289 aaPredicted RBP9.79□□□□□ -0.84
LSM5-202ENST00000409292 SERPINA10Q9UK55 444 aa9.79□□□□□ -0.84
LSM5-202ENST00000409292 TTF2Q9UNY4 1162 aaKnown RBP9.79□□□□□ -0.84
LSM5-202ENST00000409292 IL16Q14005 1332 aa9.79□□□□□ -0.84
LSM5-202ENST00000409292 SPEF2Q9C093 1822 aa9.78□□□□□ -0.84
LSM5-202ENST00000409292 CCL15-CCL14A0A0B4J2E2 113 aa9.78□□□□□ -0.84
LSM5-202ENST00000409292 USP2O75604 605 aaPredicted RBP9.78□□□□□ -0.84
LSM5-202ENST00000409292 GNRH1P01148 92 aa9.78□□□□□ -0.84
LSM5-202ENST00000409292 KLRK1P26718 216 aa9.78□□□□□ -0.84
LSM5-202ENST00000409292 HIBADHP31937 336 aaKnown RBP9.78□□□□□ -0.84
LSM5-202ENST00000409292 PRMT2P55345 433 aa9.78□□□□□ -0.84
LSM5-202ENST00000409292 CCL15Q16663 113 aa9.78□□□□□ -0.84
LSM5-202ENST00000409292 MFSD14BQ5SR56 506 aa9.78□□□□□ -0.84
LSM5-202ENST00000409292 HELBQ8NG08 1087 aaPredicted RBP9.78□□□□□ -0.84
LSM5-202ENST00000409292 TBC1D22AQ8WUA7 517 aa9.78□□□□□ -0.84
LSM5-202ENST00000409292 PRMT6Q96LA8 375 aaPredicted RBP9.78□□□□□ -0.84
LSM5-202ENST00000409292 R3HDMLQ9H3Y0 253 aa9.78□□□□□ -0.84
LSM5-202ENST00000409292 ELP3Q9H9T3 547 aa9.78□□□□□ -0.84
LSM5-202ENST00000409292 TESPA1A2RU30 521 aaPredicted RBP9.77□□□□□ -0.85
LSM5-202ENST00000409292 CETPP11597 493 aa9.77□□□□□ -0.85
LSM5-202ENST00000409292 HOXD10P28358 340 aa9.77□□□□□ -0.85
LSM5-202ENST00000409292 PSEN2P49810 448 aa9.77□□□□□ -0.85
LSM5-202ENST00000409292 FOSBP53539 338 aa9.77□□□□□ -0.85
LSM5-202ENST00000409292 UBE4AQ14139 1066 aa9.77□□□□□ -0.85
LSM5-202ENST00000409292 CAVIN4Q5BKX8 364 aa9.77□□□□□ -0.85
LSM5-202ENST00000409292 LMBR1LQ6UX01 489 aa9.77□□□□□ -0.85
LSM5-202ENST00000409292 G2E3Q7L622 706 aa9.77□□□□□ -0.85
LSM5-202ENST00000409292 CERS5Q8N5B7 392 aa9.77□□□□□ -0.85
LSM5-202ENST00000409292 ZCCHC17Q9NP64 241 aaKnown RBP9.77□□□□□ -0.85
LSM5-202ENST00000409292 ZNF70Q9UC06 446 aaPredicted RBP9.77□□□□□ -0.85
LSM5-202ENST00000409292 FZD1Q9UP38 647 aa9.77□□□□□ -0.85
LSM5-202ENST00000409292 MAST3O60307 1309 aa9.77□□□□□ -0.85
LSM5-202ENST00000409292 FAM205AQ6ZU69 1335 aa9.77□□□□□ -0.85
LSM5-202ENST00000409292 KIAA0100Q14667 2235 aaKnown RBP9.76□□□□□ -0.85
LSM5-202ENST00000409292 DCAF15Q66K64 600 aa9.76□□□□□ -0.85
LSM5-202ENST00000409292 WWC1Q8IX03 1113 aa9.76□□□□□ -0.85
LSM5-202ENST00000409292 KCNK17Q96T54 332 aa9.76□□□□□ -0.85
LSM5-202ENST00000409292 TDRD3Q9H7E2 651 aaKnown RBP9.76□□□□□ -0.85
LSM5-202ENST00000409292 JAG2Q9Y219 1238 aa9.76□□□□□ -0.85
LSM5-202ENST00000409292 TCP10L2B9ZVM9 353 aa9.75□□□□□ -0.85
LSM5-202ENST00000409292 GRM8O00222 908 aa9.75□□□□□ -0.85
LSM5-202ENST00000409292 EN2P19622 333 aaPredicted RBP9.75□□□□□ -0.85
LSM5-202ENST00000409292 ZEB1P37275 1124 aaPredicted RBP9.75□□□□□ -0.85
LSM5-202ENST00000409292 CASP7P55210 303 aa9.75□□□□□ -0.85
LSM5-202ENST00000409292 HDLBPQ00341 1268 aaKnown RBP9.75□□□□□ -0.85
LSM5-202ENST00000409292 SNAPC2Q13487 334 aa9.75□□□□□ -0.85
LSM5-202ENST00000409292 DMRTA1Q5VZB9 504 aa9.75□□□□□ -0.85
LSM5-202ENST00000409292 ERO1BQ86YB8 467 aa9.75□□□□□ -0.85
LSM5-202ENST00000409292 DZIP1LQ8IYY4 767 aaKnown RBP9.75□□□□□ -0.85
LSM5-202ENST00000409292 NKX2-3Q8TAU0 364 aa9.75□□□□□ -0.85
LSM5-202ENST00000409292 TEKT1Q969V4 418 aa9.75□□□□□ -0.85
LSM5-202ENST00000409292 ZNF333Q96JL9 665 aa9.75□□□□□ -0.85
LSM5-202ENST00000409292 EMILIN3Q9NT22 766 aa9.75□□□□□ -0.85
LSM5-202ENST00000409292 MROH5Q6ZUA9 1318 aa9.75□□□□□ -0.85
LSM5-202ENST00000409292 ALDH1L1O75891 902 aa9.74□□□□□ -0.85
LSM5-202ENST00000409292 CRKP46108 304 aa9.74□□□□□ -0.85
LSM5-202ENST00000409292 FOXO4P98177 505 aa9.74□□□□□ -0.85
LSM5-202ENST00000409292 VGLL4Q14135 290 aa9.74□□□□□ -0.85
LSM5-202ENST00000409292 WDR63Q8IWG1 891 aa9.74□□□□□ -0.85
LSM5-202ENST00000409292 TDRD7Q8NHU6 1098 aaKnown RBP9.74□□□□□ -0.85
LSM5-202ENST00000409292 HTATIP2Q9BUP3 242 aa9.74□□□□□ -0.85
LSM5-202ENST00000409292 SRCIN1Q9C0H9 1055 aa9.74□□□□□ -0.85
LSM5-202ENST00000409292 ECM29Q5VYK3 1845 aa9.74□□□□□ -0.85
LSM5-202ENST00000409292 CACNA1FO60840 1977 aa9.74□□□□□ -0.85
LSM5-202ENST00000409292 SSC5DA1L4H1 1573 aa9.73□□□□□ -0.85
LSM5-202ENST00000409292 SPDYE5A6NIY4 337 aa9.73□□□□□ -0.85
LSM5-202ENST00000409292 SNAP23O00161 211 aa9.73□□□□□ -0.85
LSM5-202ENST00000409292 TLR2O60603 784 aa9.73□□□□□ -0.85
LSM5-202ENST00000409292 PTPREP23469 700 aa9.73□□□□□ -0.85
LSM5-202ENST00000409292 GYG1P46976 350 aa9.73□□□□□ -0.85
LSM5-202ENST00000409292 CHAF1AQ13111 956 aaPredicted RBP9.73□□□□□ -0.85
LSM5-202ENST00000409292 CAMK2BQ13554 666 aa9.73□□□□□ -0.85
LSM5-202ENST00000409292 BEND3Q5T5X7 828 aa9.73□□□□□ -0.85
LSM5-202ENST00000409292 SLC4A10Q6U841 1118 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms