RNA–Protein interactions for RNA: ENST00000409006.3

KDELR3-202, Transcript of KDEL endoplasmic reticulum protein retention receptor 3, humanhuman

TSL 1 (best) BASIC

Gene KDELR3, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3-202ENST00000409006 ZBTB22O15209 634 aa27.88■■■□□ 2.05
KDELR3-202ENST00000409006 ALDH1A1P00352 501 aa27.88■■■□□ 2.05
KDELR3-202ENST00000409006 RGS19P49795 217 aa27.87■■■□□ 2.05
KDELR3-202ENST00000409006 NFIAQ12857 509 aa27.87■■■□□ 2.05
KDELR3-202ENST00000409006 MS4A4AQ96JQ5 239 aa27.87■■■□□ 2.05
KDELR3-202ENST00000409006 TESPA1A2RU30 521 aaPredicted RBP27.86■■■□□ 2.05
KDELR3-202ENST00000409006 FKTNO75072 461 aa27.86■■■□□ 2.05
KDELR3-202ENST00000409006 TCP10Q12799 353 aa27.86■■■□□ 2.05
KDELR3-202ENST00000409006 AKAP2Q9Y2D5 859 aa27.86■■■□□ 2.05
KDELR3-202ENST00000409006 RPAP1Q9BWH6 1393 aaPredicted RBP27.86■■■□□ 2.05
KDELR3-202ENST00000409006 RLBP1P12271 317 aa27.85■■■□□ 2.05
KDELR3-202ENST00000409006 MIGA2Q7L4E1 593 aa27.85■■■□□ 2.05
KDELR3-202ENST00000409006 NEUROD6Q96NK8 337 aa27.85■■■□□ 2.05
KDELR3-202ENST00000409006 SNCAIPQ9Y6H5 919 aa27.85■■■□□ 2.05
KDELR3-202ENST00000409006 FAM151AQ8WW52 585 aa27.84■■■□□ 2.05
KDELR3-202ENST00000409006 ZKSCAN4Q969J2 545 aaPredicted RBP27.84■■■□□ 2.05
KDELR3-202ENST00000409006 WRNIP1Q96S55 665 aa27.84■■■□□ 2.05
KDELR3-202ENST00000409006 C1orf115Q9H7X2 142 aa27.84■■■□□ 2.05
KDELR3-202ENST00000409006 USP40Q9NVE5 1235 aa27.84■■■□□ 2.05
KDELR3-202ENST00000409006 FAM198AQ9UFP1 575 aa27.84■■■□□ 2.05
KDELR3-202ENST00000409006 CSADQ9Y600 493 aa27.84■■■□□ 2.05
KDELR3-202ENST00000409006 CRHR2Q13324 411 aa27.83■■■□□ 2.05
KDELR3-202ENST00000409006 ZFPM1Q8IX07 1006 aa27.83■■■□□ 2.05
KDELR3-202ENST00000409006 OTUD5Q96G74 571 aa27.83■■■□□ 2.05
KDELR3-202ENST00000409006 ABCF2Q9UG63 623 aa27.83■■■□□ 2.05
KDELR3-202ENST00000409006 HPS5Q9UPZ3 1129 aa27.83■■■□□ 2.05
KDELR3-202ENST00000409006 ZBED9Q6R2W3 1325 aa27.83■■■□□ 2.05
KDELR3-202ENST00000409006 DOCK2Q92608 1830 aa27.83■■■□□ 2.05
KDELR3-202ENST00000409006 G3BP1Q13283 466 aaKnown RBP eCLIP27.82■■■□□ 2.04
KDELR3-202ENST00000409006 POLA2Q14181 598 aa27.82■■■□□ 2.04
KDELR3-202ENST00000409006 MVPQ14764 893 aaKnown RBP27.82■■■□□ 2.04
KDELR3-202ENST00000409006 ZGPATQ8N5A5 531 aaKnown RBP27.82■■■□□ 2.04
KDELR3-202ENST00000409006 BRI3BPQ8WY22 251 aa27.82■■■□□ 2.04
KDELR3-202ENST00000409006 PDS5AQ29RF7 1337 aaKnown RBP27.82■■■□□ 2.04
KDELR3-202ENST00000409006 SPDYE5A6NIY4 337 aa27.81■■■□□ 2.04
KDELR3-202ENST00000409006 PI16Q6UXB8 463 aa27.81■■■□□ 2.04
KDELR3-202ENST00000409006 GAKO14976 1311 aa27.81■■■□□ 2.04
KDELR3-202ENST00000409006 INPP5BP32019 993 aa27.8■■■□□ 2.04
KDELR3-202ENST00000409006 SOX10P56693 466 aa27.8■■■□□ 2.04
KDELR3-202ENST00000409006 PKN2Q16513 984 aaKnown RBP27.8■■■□□ 2.04
KDELR3-202ENST00000409006 HMG20BQ9P0W2 317 aa27.8■■■□□ 2.04
KDELR3-202ENST00000409006 MYO5AQ9Y4I1 1855 aaKnown RBP27.79■■■□□ 2.04
KDELR3-202ENST00000409006 CCL15-CCL14A0A0B4J2E2 113 aa27.79■■■□□ 2.04
KDELR3-202ENST00000409006 ATP8B2P98198 1209 aa27.79■■■□□ 2.04
KDELR3-202ENST00000409006 MLLT1Q03111 559 aaPredicted RBP27.79■■■□□ 2.04
KDELR3-202ENST00000409006 CCL15Q16663 113 aa27.79■■■□□ 2.04
KDELR3-202ENST00000409006 DCAF15Q66K64 600 aa27.79■■■□□ 2.04
KDELR3-202ENST00000409006 OTUD7BQ6GQQ9 843 aa27.79■■■□□ 2.04
KDELR3-202ENST00000409006 DZIP1Q86YF9 867 aaKnown RBP27.79■■■□□ 2.04
KDELR3-202ENST00000409006 FTSJ3Q8IY81 847 aaKnown RBP27.79■■■□□ 2.04
KDELR3-202ENST00000409006 ZNF384Q8TF68 577 aa27.79■■■□□ 2.04
KDELR3-202ENST00000409006 HOOK2Q96ED9 719 aa27.79■■■□□ 2.04
KDELR3-202ENST00000409006 ZNF341Q9BYN7 854 aa27.79■■■□□ 2.04
KDELR3-202ENST00000409006 ZBTB7BO15156 539 aaPredicted RBP27.78■■■□□ 2.04
KDELR3-202ENST00000409006 GTF2A2P52657 109 aa27.78■■■□□ 2.04
KDELR3-202ENST00000409006 ERO1BQ86YB8 467 aa27.78■■■□□ 2.04
KDELR3-202ENST00000409006 ITPRIPQ8IWB1 547 aa27.78■■■□□ 2.04
KDELR3-202ENST00000409006 SSH3Q8TE77 659 aa27.78■■■□□ 2.04
KDELR3-202ENST00000409006 CAP1Q01518 475 aa27.77■■■□□ 2.04
KDELR3-202ENST00000409006 TBC1D9Q6ZT07 1266 aa27.77■■■□□ 2.04
KDELR3-202ENST00000409006 FAM43AQ8N2R8 423 aa27.77■■■□□ 2.04
KDELR3-202ENST00000409006 RFX7Q2KHR2 1363 aa27.76■■■□□ 2.03
KDELR3-202ENST00000409006 IRF6O14896 467 aa27.76■■■□□ 2.03
KDELR3-202ENST00000409006 ARID4AP29374 1257 aaPredicted RBP27.76■■■□□ 2.03
KDELR3-202ENST00000409006 RGS3P49796 1198 aa27.76■■■□□ 2.03
KDELR3-202ENST00000409006 MECOMQ03112 1051 aa27.76■■■□□ 2.03
KDELR3-202ENST00000409006 GORABQ5T7V8 394 aa27.76■■■□□ 2.03
KDELR3-202ENST00000409006 FBXO46Q6PJ61 603 aaPredicted RBP27.76■■■□□ 2.03
KDELR3-202ENST00000409006 SPATA5Q8NB90 893 aa27.76■■■□□ 2.03
KDELR3-202ENST00000409006 FAM163AQ96GL9 167 aaPredicted RBP27.76■■■□□ 2.03
KDELR3-202ENST00000409006 ZNF112Q9UJU3 913 aa27.76■■■□□ 2.03
KDELR3-202ENST00000409006 MCAMP43121 646 aa27.75■■■□□ 2.03
KDELR3-202ENST00000409006 SPTY2D1Q68D10 685 aaPredicted RBP27.75■■■□□ 2.03
KDELR3-202ENST00000409006 ERICH6Q7L0X2 663 aa27.75■■■□□ 2.03
KDELR3-202ENST00000409006 IDI2Q9BXS1 227 aa27.75■■■□□ 2.03
KDELR3-202ENST00000409006 ATRNL1Q5VV63 1379 aa27.74■■■□□ 2.03
KDELR3-202ENST00000409006 MROH7-TTC4A0A0A0MT08 1334 aa27.74■■■□□ 2.03
KDELR3-202ENST00000409006 BTDP43251 543 aa27.74■■■□□ 2.03
KDELR3-202ENST00000409006 SH3BP5LQ7L8J4 393 aa27.74■■■□□ 2.03
KDELR3-202ENST00000409006 OTOP1Q7RTM1 612 aa27.74■■■□□ 2.03
KDELR3-202ENST00000409006 CD99L2Q8TCZ2 262 aa27.74■■■□□ 2.03
KDELR3-202ENST00000409006 DDX4Q9NQI0 724 aaKnown RBP27.74■■■□□ 2.03
KDELR3-202ENST00000409006 TRIM17Q9Y577 477 aa27.74■■■□□ 2.03
KDELR3-202ENST00000409006 SURF6O75683 361 aaKnown RBP27.73■■■□□ 2.03
KDELR3-202ENST00000409006 WDHD1O75717 1129 aaPredicted RBP27.73■■■□□ 2.03
KDELR3-202ENST00000409006 SLURP2P0DP57 97 aa27.73■■■□□ 2.03
KDELR3-202ENST00000409006 PPIL2Q13356 520 aa27.73■■■□□ 2.03
KDELR3-202ENST00000409006 PANK1Q8TE04 598 aa27.73■■■□□ 2.03
KDELR3-202ENST00000409006 ZSWIM8A7E2V4 1837 aa27.73■■■□□ 2.03
KDELR3-202ENST00000409006 ENTPD3O75355 529 aa27.72■■■□□ 2.03
KDELR3-202ENST00000409006 TAF1CQ15572 869 aaPredicted RBP27.72■■■□□ 2.03
KDELR3-202ENST00000409006 TNNI3KQ59H18 835 aa27.72■■■□□ 2.03
KDELR3-202ENST00000409006 SLF2Q8IX21 1173 aa27.72■■■□□ 2.03
KDELR3-202ENST00000409006 DBNDD2Q9BQY9 259 aa27.72■■■□□ 2.03
KDELR3-202ENST00000409006 FPGT-TNNI3KV9GXZ4 949 aa27.72■■■□□ 2.03
KDELR3-202ENST00000409006 GPR75-ASB3A0A0A6YYF3 556 aa27.71■■■□□ 2.03
KDELR3-202ENST00000409006 RHBDL3P58872 404 aa27.71■■■□□ 2.03
KDELR3-202ENST00000409006 SP3Q02447 781 aa27.71■■■□□ 2.03
KDELR3-202ENST00000409006 PPATQ06203 517 aa27.71■■■□□ 2.03
KDELR3-202ENST00000409006 NSUN4Q96CB9 384 aaKnown RBP27.71■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms