RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 PA2G4Q9UQ80 394 aaKnown RBP15.4■□□□□ 0.06
SMARCB1-203ENST00000407082 POTEFA5A3E0 1075 aa15.39■□□□□ 0.05
SMARCB1-203ENST00000407082 BAG4O95429 457 aaKnown RBP15.39■□□□□ 0.05
SMARCB1-203ENST00000407082 ZNF280AP59817 542 aaPredicted RBP15.39■□□□□ 0.05
SMARCB1-203ENST00000407082 LRRC24Q50LG9 513 aa15.39■□□□□ 0.05
SMARCB1-203ENST00000407082 AGBL3Q8NEM8 1001 aa15.39■□□□□ 0.05
SMARCB1-203ENST00000407082 GGA1Q9UJY5 639 aa15.39■□□□□ 0.05
SMARCB1-203ENST00000407082 RIPOR2Q9Y4F9 1068 aa15.39■□□□□ 0.05
SMARCB1-203ENST00000407082 TRIM17Q9Y577 477 aa15.39■□□□□ 0.05
SMARCB1-203ENST00000407082 EYA2O00167 538 aa15.38■□□□□ 0.05
SMARCB1-203ENST00000407082 ZKSCAN1P17029 563 aaPredicted RBP15.38■□□□□ 0.05
SMARCB1-203ENST00000407082 CHRNDQ07001 517 aa15.38■□□□□ 0.05
SMARCB1-203ENST00000407082 RNF20Q5VTR2 975 aa15.38■□□□□ 0.05
SMARCB1-203ENST00000407082 FBXW7Q969H0 707 aa15.38■□□□□ 0.05
SMARCB1-203ENST00000407082 TMX3Q96JJ7 454 aa15.38■□□□□ 0.05
SMARCB1-203ENST00000407082 ZSCAN31Q96LW9 406 aaPredicted RBP15.38■□□□□ 0.05
SMARCB1-203ENST00000407082 TM6SF1Q9BZW5 370 aa15.38■□□□□ 0.05
SMARCB1-203ENST00000407082 ANKRD2Q9GZV1 360 aa15.38■□□□□ 0.05
SMARCB1-203ENST00000407082 FBXO3Q9UK99 471 aa15.38■□□□□ 0.05
SMARCB1-203ENST00000407082 RFX7Q2KHR2 1363 aa15.37■□□□□ 0.05
SMARCB1-203ENST00000407082 PAPPA2Q9BXP8 1791 aa15.37■□□□□ 0.05
SMARCB1-203ENST00000407082 CIAO1O76071 339 aa15.37■□□□□ 0.05
SMARCB1-203ENST00000407082 CYP2E1P05181 493 aaPredicted RBP15.37■□□□□ 0.05
SMARCB1-203ENST00000407082 NBPF9Q3BBW0 867 aa15.37■□□□□ 0.05
SMARCB1-203ENST00000407082 HELBQ8NG08 1087 aaPredicted RBP15.37■□□□□ 0.05
SMARCB1-203ENST00000407082 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.37■□□□□ 0.05
SMARCB1-203ENST00000407082 SPEF2Q9C093 1822 aa15.37■□□□□ 0.05
SMARCB1-203ENST00000407082 TAF5LO75529 589 aa15.36■□□□□ 0.05
SMARCB1-203ENST00000407082 PSMA5P28066 241 aa15.36■□□□□ 0.05
SMARCB1-203ENST00000407082 IL15P40933 162 aaPredicted RBP15.36■□□□□ 0.05
SMARCB1-203ENST00000407082 FXR1P51114 621 aaKnown RBP eCLIP15.36■□□□□ 0.05
SMARCB1-203ENST00000407082 KLHL40Q2TBA0 621 aa15.36■□□□□ 0.05
SMARCB1-203ENST00000407082 NOM1Q5C9Z4 860 aaKnown RBP15.36■□□□□ 0.05
SMARCB1-203ENST00000407082 METTL24Q5JXM2 366 aa15.36■□□□□ 0.05
SMARCB1-203ENST00000407082 ATG9AQ7Z3C6 839 aa15.36■□□□□ 0.05
SMARCB1-203ENST00000407082 LSG1Q9H089 658 aaKnown RBP15.36■□□□□ 0.05
SMARCB1-203ENST00000407082 PODXL2Q9NZ53 605 aa15.36■□□□□ 0.05
SMARCB1-203ENST00000407082 XDHP47989 1333 aa15.36■□□□□ 0.05
SMARCB1-203ENST00000407082 MROH5Q6ZUA9 1318 aa15.36■□□□□ 0.05
SMARCB1-203ENST00000407082 PITPNM2Q9BZ72 1349 aa15.36■□□□□ 0.05
SMARCB1-203ENST00000407082 LRRC37AA6NMS7 1700 aa15.35■□□□□ 0.05
SMARCB1-203ENST00000407082 SCN9AQ15858 1988 aa15.35■□□□□ 0.05
SMARCB1-203ENST00000407082 FSD2A1L4K1 749 aa15.35■□□□□ 0.05
SMARCB1-203ENST00000407082 USP17L3A6NCW0 530 aa15.35■□□□□ 0.05
SMARCB1-203ENST00000407082 USP17L4A6NCW7 530 aa15.35■□□□□ 0.05
SMARCB1-203ENST00000407082 SASH1O94885 1247 aa15.35■□□□□ 0.05
SMARCB1-203ENST00000407082 EN2P19622 333 aaPredicted RBP15.35■□□□□ 0.05
SMARCB1-203ENST00000407082 CWC27Q6UX04 472 aaKnown RBP15.35■□□□□ 0.05
SMARCB1-203ENST00000407082 USP17L1Q7RTZ2 530 aa15.35■□□□□ 0.05
SMARCB1-203ENST00000407082 ARMC9Q7Z3E5 817 aa15.35■□□□□ 0.05
SMARCB1-203ENST00000407082 GPR108Q9NPR9 543 aa15.35■□□□□ 0.05
SMARCB1-203ENST00000407082 MAP4K4O95819 1239 aaPredicted RBP15.34■□□□□ 0.05
SMARCB1-203ENST00000407082 ATP5JP18859 108 aa15.34■□□□□ 0.05
SMARCB1-203ENST00000407082 ATP2B4P23634 1241 aa15.34■□□□□ 0.05
SMARCB1-203ENST00000407082 KCNJ4P48050 445 aa15.34■□□□□ 0.05
SMARCB1-203ENST00000407082 OTOP1Q7RTM1 612 aa15.34■□□□□ 0.05
SMARCB1-203ENST00000407082 OGFOD1Q8N543 542 aa15.34■□□□□ 0.05
SMARCB1-203ENST00000407082 KCNB2Q92953 911 aa15.34■□□□□ 0.05
SMARCB1-203ENST00000407082 SH2B1Q9NRF2 756 aaPredicted RBP15.34■□□□□ 0.05
SMARCB1-203ENST00000407082 SNRKQ9NRH2 765 aa15.34■□□□□ 0.05
SMARCB1-203ENST00000407082 CEP126Q9P2H0 1117 aa15.34■□□□□ 0.05
SMARCB1-203ENST00000407082 LIMCH1Q9UPQ0 1083 aa15.34■□□□□ 0.05
SMARCB1-203ENST00000407082 LEMD3Q9Y2U8 911 aa15.34■□□□□ 0.05
SMARCB1-203ENST00000407082 DDX49Q9Y6V7 483 aaKnown RBP15.34■□□□□ 0.05
SMARCB1-203ENST00000407082 WTIPA6NIX2 430 aaPredicted RBP15.33■□□□□ 0.04
SMARCB1-203ENST00000407082 PDE8BO95263 885 aa15.33■□□□□ 0.04
SMARCB1-203ENST00000407082 ALDH1A1P00352 501 aa15.33■□□□□ 0.04
SMARCB1-203ENST00000407082 NCLP19338 710 aaKnown RBP15.33■□□□□ 0.04
SMARCB1-203ENST00000407082 ANKRD1Q15327 319 aa15.33■□□□□ 0.04
SMARCB1-203ENST00000407082 LRRFIP1Q32MZ4 808 aaKnown RBP15.33■□□□□ 0.04
SMARCB1-203ENST00000407082 EAF2Q96CJ1 260 aaPredicted RBP15.33■□□□□ 0.04
SMARCB1-203ENST00000407082 SLC10A4Q96EP9 437 aa15.33■□□□□ 0.04
SMARCB1-203ENST00000407082 GMLQ99445 158 aa15.33■□□□□ 0.04
SMARCB1-203ENST00000407082 MXD3Q9BW11 206 aa15.33■□□□□ 0.04
SMARCB1-203ENST00000407082 HMG20BQ9P0W2 317 aa15.33■□□□□ 0.04
SMARCB1-203ENST00000407082 ANGEL1Q9UNK9 670 aaKnown RBP15.33■□□□□ 0.04
SMARCB1-203ENST00000407082 COLQQ9Y215 455 aaPredicted RBP15.33■□□□□ 0.04
SMARCB1-203ENST00000407082 SNX14Q9Y5W7 946 aa15.33■□□□□ 0.04
SMARCB1-203ENST00000407082 SNAP23O00161 211 aa15.32■□□□□ 0.04
SMARCB1-203ENST00000407082 MBD3O95983 291 aa15.32■□□□□ 0.04
SMARCB1-203ENST00000407082 TFCP2Q12800 502 aa15.32■□□□□ 0.04
SMARCB1-203ENST00000407082 VPS53Q5VIR6 699 aa15.32■□□□□ 0.04
SMARCB1-203ENST00000407082 SPRYD7Q5W111 196 aa15.32■□□□□ 0.04
SMARCB1-203ENST00000407082 VGLL2Q8N8G2 317 aa15.32■□□□□ 0.04
SMARCB1-203ENST00000407082 ANP32BQ92688 251 aaKnown RBP15.32■□□□□ 0.04
SMARCB1-203ENST00000407082 FSD1Q9BTV5 496 aa15.32■□□□□ 0.04
SMARCB1-203ENST00000407082 PALD1Q9ULE6 856 aa15.32■□□□□ 0.04
SMARCB1-203ENST00000407082 FZD1Q9UP38 647 aa15.32■□□□□ 0.04
SMARCB1-203ENST00000407082 ATP6V1DQ9Y5K8 247 aa15.32■□□□□ 0.04
SMARCB1-203ENST00000407082 CYP46A1Q9Y6A2 500 aa15.32■□□□□ 0.04
SMARCB1-203ENST00000407082 ZNF804BA4D1E1 1349 aa15.32■□□□□ 0.04
SMARCB1-203ENST00000407082 KIAA0100Q14667 2235 aaKnown RBP15.31■□□□□ 0.04
SMARCB1-203ENST00000407082 UBE4AQ14139 1066 aa15.31■□□□□ 0.04
SMARCB1-203ENST00000407082 KRT32Q14532 448 aa15.31■□□□□ 0.04
SMARCB1-203ENST00000407082 TNNI3KQ59H18 835 aa15.31■□□□□ 0.04
SMARCB1-203ENST00000407082 MCTP1Q6DN14 999 aa15.31■□□□□ 0.04
SMARCB1-203ENST00000407082 TMEM106CQ9BVX2 250 aa15.31■□□□□ 0.04
SMARCB1-203ENST00000407082 CFHR5Q9BXR6 569 aa15.31■□□□□ 0.04
SMARCB1-203ENST00000407082 CCDC8Q9H0W5 538 aaPredicted RBP15.31■□□□□ 0.04
SMARCB1-203ENST00000407082 GZF1Q9H116 711 aaPredicted RBP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms