RNA–Protein interactions for RNA: ENST00000406434.5

FAM49A-202, Transcript of family with sequence similarity 49 member A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene FAM49A, Length 1,386 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49A-202ENST00000406434 TMOD2Q9NZR1 351 aa12.72□□□□□ -0.37
FAM49A-202ENST00000406434 PPP2R3BQ9Y5P8 575 aa12.72□□□□□ -0.37
FAM49A-202ENST00000406434 FPGT-TNNI3KV9GXZ4 949 aa12.72□□□□□ -0.37
FAM49A-202ENST00000406434 PRKAR2AP13861 404 aaKnown RBP12.71□□□□□ -0.37
FAM49A-202ENST00000406434 NOGQ13253 232 aa12.71□□□□□ -0.37
FAM49A-202ENST00000406434 DIXDC1Q155Q3 683 aa12.71□□□□□ -0.37
FAM49A-202ENST00000406434 CCDC158Q5M9N0 1113 aa12.71□□□□□ -0.37
FAM49A-202ENST00000406434 TTC39AQ5SRH9 613 aa12.71□□□□□ -0.37
FAM49A-202ENST00000406434 SPTY2D1Q68D10 685 aaPredicted RBP12.71□□□□□ -0.37
FAM49A-202ENST00000406434 HHIPL2Q6UWX4 724 aa12.71□□□□□ -0.37
FAM49A-202ENST00000406434 RPAP2Q8IXW5 612 aaPredicted RBP12.71□□□□□ -0.37
FAM49A-202ENST00000406434 HS6ST3Q8IZP7 471 aa12.71□□□□□ -0.37
FAM49A-202ENST00000406434 DBNDD2Q9BQY9 259 aa12.71□□□□□ -0.37
FAM49A-202ENST00000406434 GPR108Q9NPR9 543 aa12.71□□□□□ -0.37
FAM49A-202ENST00000406434 COL1A1P02452 1464 aaPredicted RBP12.71□□□□□ -0.37
FAM49A-202ENST00000406434 ECM29Q5VYK3 1845 aa12.71□□□□□ -0.37
FAM49A-202ENST00000406434 RIOK3O14730 519 aaKnown RBP12.7□□□□□ -0.38
FAM49A-202ENST00000406434 PPP1R12BO60237 982 aaPredicted RBP12.7□□□□□ -0.38
FAM49A-202ENST00000406434 UQCRFS1P1P0C7P4 283 aa12.7□□□□□ -0.38
FAM49A-202ENST00000406434 CTCFP49711 727 aaPredicted RBP12.7□□□□□ -0.38
FAM49A-202ENST00000406434 KIF23Q02241 960 aaPredicted RBP12.7□□□□□ -0.38
FAM49A-202ENST00000406434 MKRN3Q13064 507 aaKnown RBP12.7□□□□□ -0.38
FAM49A-202ENST00000406434 COL13A1Q5TAT6 717 aaPredicted RBP12.7□□□□□ -0.38
FAM49A-202ENST00000406434 PI16Q6UXB8 463 aa12.7□□□□□ -0.38
FAM49A-202ENST00000406434 TBC1D9Q6ZT07 1266 aa12.7□□□□□ -0.38
FAM49A-202ENST00000406434 ERICH6Q7L0X2 663 aa12.7□□□□□ -0.38
FAM49A-202ENST00000406434 DZIP1Q86YF9 867 aaKnown RBP12.7□□□□□ -0.38
FAM49A-202ENST00000406434 SPATA5Q8NB90 893 aa12.7□□□□□ -0.38
FAM49A-202ENST00000406434 TMEM39BQ9GZU3 492 aa12.7□□□□□ -0.38
FAM49A-202ENST00000406434 SNRKQ9NRH2 765 aa12.7□□□□□ -0.38
FAM49A-202ENST00000406434 USP40Q9NVE5 1235 aa12.7□□□□□ -0.38
FAM49A-202ENST00000406434 HMG20BQ9P0W2 317 aa12.7□□□□□ -0.38
FAM49A-202ENST00000406434 DAGLAQ9Y4D2 1042 aa12.7□□□□□ -0.38
FAM49A-202ENST00000406434 SALL1Q9NSC2 1324 aa12.7□□□□□ -0.38
FAM49A-202ENST00000406434 FAM155AB1AL88 458 aaPredicted RBP12.69□□□□□ -0.38
FAM49A-202ENST00000406434 HMMRO75330 724 aa12.69□□□□□ -0.38
FAM49A-202ENST00000406434 SLC10A3P09131 477 aa12.69□□□□□ -0.38
FAM49A-202ENST00000406434 LBX1P52954 281 aa12.69□□□□□ -0.38
FAM49A-202ENST00000406434 HSP90AB4PQ58FF6 505 aa12.69□□□□□ -0.38
FAM49A-202ENST00000406434 RASAL3Q86YV0 1011 aa12.69□□□□□ -0.38
FAM49A-202ENST00000406434 ERC1Q8IUD2 1116 aa12.69□□□□□ -0.38
FAM49A-202ENST00000406434 EAF2Q96CJ1 260 aaPredicted RBP12.69□□□□□ -0.38
FAM49A-202ENST00000406434 SLC10A4Q96EP9 437 aa12.69□□□□□ -0.38
FAM49A-202ENST00000406434 RAI14Q9P0K7 980 aa12.69□□□□□ -0.38
FAM49A-202ENST00000406434 TSKSQ9UJT2 592 aa12.69□□□□□ -0.38
FAM49A-202ENST00000406434 ARAP2Q8WZ64 1704 aa12.69□□□□□ -0.38
FAM49A-202ENST00000406434 PAPPA2Q9BXP8 1791 aa12.69□□□□□ -0.38
FAM49A-202ENST00000406434 ARID4AP29374 1257 aaPredicted RBP12.69□□□□□ -0.38
FAM49A-202ENST00000406434 MCAMP43121 646 aa12.69□□□□□ -0.38
FAM49A-202ENST00000406434 CDC42EP5Q6NZY7 148 aa12.69□□□□□ -0.38
FAM49A-202ENST00000406434 CDAN1Q8IWY9 1227 aa12.69□□□□□ -0.38
FAM49A-202ENST00000406434 SLF2Q8IX21 1173 aa12.69□□□□□ -0.38
FAM49A-202ENST00000406434 SIRT2Q8IXJ6 389 aa12.69□□□□□ -0.38
FAM49A-202ENST00000406434 IL1RAPL2Q9NP60 686 aa12.69□□□□□ -0.38
FAM49A-202ENST00000406434 LRP2BPQ9P2M1 347 aa12.69□□□□□ -0.38
FAM49A-202ENST00000406434 AK9Q5TCS8 1911 aa12.68□□□□□ -0.38
FAM49A-202ENST00000406434 MYH2Q9UKX2 1941 aa12.68□□□□□ -0.38
FAM49A-202ENST00000406434 USP2O75604 605 aaPredicted RBP12.68□□□□□ -0.38
FAM49A-202ENST00000406434 IREB2P48200 963 aaKnown RBP12.68□□□□□ -0.38
FAM49A-202ENST00000406434 TCP10Q12799 353 aa12.68□□□□□ -0.38
FAM49A-202ENST00000406434 CHRDL2Q6WN34 429 aa12.68□□□□□ -0.38
FAM49A-202ENST00000406434 AACSQ86V21 672 aa12.68□□□□□ -0.38
FAM49A-202ENST00000406434 RHPN1Q8TCX5 695 aa12.68□□□□□ -0.38
FAM49A-202ENST00000406434 TEPSINQ96N21 525 aa12.68□□□□□ -0.38
FAM49A-202ENST00000406434 TLR7Q9NYK1 1049 aaKnown RBP12.68□□□□□ -0.38
FAM49A-202ENST00000406434 PDS5AQ29RF7 1337 aaKnown RBP12.67□□□□□ -0.38
FAM49A-202ENST00000406434 HSPA8P11142 646 aaKnown RBP12.67□□□□□ -0.38
FAM49A-202ENST00000406434 MECOMQ03112 1051 aa12.67□□□□□ -0.38
FAM49A-202ENST00000406434 LDLRAD1Q5T700 205 aa12.67□□□□□ -0.38
FAM49A-202ENST00000406434 FAM83AQ86UY5 434 aa12.67□□□□□ -0.38
FAM49A-202ENST00000406434 CLMNQ96JQ2 1002 aa12.67□□□□□ -0.38
FAM49A-202ENST00000406434 CSRNP1Q96S65 589 aa12.67□□□□□ -0.38
FAM49A-202ENST00000406434 DBNLQ9UJU6 430 aaKnown RBP12.67□□□□□ -0.38
FAM49A-202ENST00000406434 TRPA1O75762 1119 aa12.66□□□□□ -0.38
FAM49A-202ENST00000406434 LDHCP07864 332 aa12.66□□□□□ -0.38
FAM49A-202ENST00000406434 PYGBP11216 843 aa12.66□□□□□ -0.38
FAM49A-202ENST00000406434 ZAP70P43403 619 aa12.66□□□□□ -0.38
FAM49A-202ENST00000406434 GSTO1P78417 241 aa12.66□□□□□ -0.38
FAM49A-202ENST00000406434 NFIAQ12857 509 aa12.66□□□□□ -0.38
FAM49A-202ENST00000406434 FKBP1CQ5VVH2 108 aa12.66□□□□□ -0.38
FAM49A-202ENST00000406434 CLASRPQ8N2M8 674 aaKnown RBP12.66□□□□□ -0.38
FAM49A-202ENST00000406434 FAM151AQ8WW52 585 aa12.66□□□□□ -0.38
FAM49A-202ENST00000406434 KIF1BPQ96EK5 621 aa12.66□□□□□ -0.38
FAM49A-202ENST00000406434 CA12O43570 354 aa12.65□□□□□ -0.38
FAM49A-202ENST00000406434 RAB11FIP3O75154 756 aa12.65□□□□□ -0.38
FAM49A-202ENST00000406434 CYP2E1P05181 493 aaPredicted RBP12.65□□□□□ -0.38
FAM49A-202ENST00000406434 IFIT2P09913 472 aaKnown RBP12.65□□□□□ -0.38
FAM49A-202ENST00000406434 BTDP43251 543 aa12.65□□□□□ -0.38
FAM49A-202ENST00000406434 RRP1P56182 461 aaKnown RBP12.65□□□□□ -0.38
FAM49A-202ENST00000406434 MAP3K11Q16584 847 aa12.65□□□□□ -0.38
FAM49A-202ENST00000406434 MIGA2Q7L4E1 593 aa12.65□□□□□ -0.38
FAM49A-202ENST00000406434 ZFPM1Q8IX07 1006 aa12.65□□□□□ -0.38
FAM49A-202ENST00000406434 ANKRD13AQ8IZ07 590 aa12.65□□□□□ -0.38
FAM49A-202ENST00000406434 FAM163AQ96GL9 167 aaPredicted RBP12.65□□□□□ -0.38
FAM49A-202ENST00000406434 PRDM10Q9NQV6 1147 aa12.65□□□□□ -0.38
FAM49A-202ENST00000406434 SSC5DA1L4H1 1573 aa12.64□□□□□ -0.39
FAM49A-202ENST00000406434 MAP3K9P80192 1104 aa12.64□□□□□ -0.39
FAM49A-202ENST00000406434 PICALMQ13492 652 aa12.64□□□□□ -0.39
FAM49A-202ENST00000406434 SPRYD7Q5W111 196 aa12.64□□□□□ -0.39
FAM49A-202ENST00000406434 NAA16Q6N069 864 aaPredicted RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms