RNA–Protein interactions for RNA: ENST00000406397.1

VSNL1-203, Transcript of visinin like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene VSNL1, Length 2,725 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSNL1-203ENST00000406397 ZNF496Q96IT1 587 aaPredicted RBP6.32□□□□□ -1.4
VSNL1-203ENST00000406397 PSMD1Q99460 953 aa6.32□□□□□ -1.4
VSNL1-203ENST00000406397 PARD6BQ9BYG5 372 aa6.32□□□□□ -1.4
VSNL1-203ENST00000406397 A1CFQ9NQ94 594 aaKnown RBP6.32□□□□□ -1.4
VSNL1-203ENST00000406397 DNAI1Q9UI46 699 aa6.32□□□□□ -1.4
VSNL1-203ENST00000406397 ITGB4P16144 1822 aa6.32□□□□□ -1.4
VSNL1-203ENST00000406397 SRGAP3O43295 1099 aa6.32□□□□□ -1.4
VSNL1-203ENST00000406397 SKAP2O75563 359 aaPredicted RBP6.32□□□□□ -1.4
VSNL1-203ENST00000406397 GNAI3P08754 354 aa6.32□□□□□ -1.4
VSNL1-203ENST00000406397 ZSCAN22P10073 491 aaPredicted RBP6.32□□□□□ -1.4
VSNL1-203ENST00000406397 SDSP20132 328 aa6.32□□□□□ -1.4
VSNL1-203ENST00000406397 IBSPP21815 317 aaPredicted RBP6.32□□□□□ -1.4
VSNL1-203ENST00000406397 PIP4K2AP48426 406 aaPredicted RBP6.32□□□□□ -1.4
VSNL1-203ENST00000406397 ZNF165P49910 485 aa6.32□□□□□ -1.4
VSNL1-203ENST00000406397 ATP2B2Q01814 1243 aa6.32□□□□□ -1.4
VSNL1-203ENST00000406397 DNM1Q05193 864 aaKnown RBP6.32□□□□□ -1.4
VSNL1-203ENST00000406397 TWISTNBQ3B726 338 aaPredicted RBP6.32□□□□□ -1.4
VSNL1-203ENST00000406397 CNNM3Q8NE01 707 aa6.32□□□□□ -1.4
VSNL1-203ENST00000406397 OTUD7AQ8TE49 926 aaPredicted RBP6.32□□□□□ -1.4
VSNL1-203ENST00000406397 ZKSCAN4Q969J2 545 aaPredicted RBP6.32□□□□□ -1.4
VSNL1-203ENST00000406397 DNAJC25Q9H1X3 360 aa6.32□□□□□ -1.4
VSNL1-203ENST00000406397 TRPC6Q9Y210 931 aa6.32□□□□□ -1.4
VSNL1-203ENST00000406397 SOS1Q07889 1333 aaPredicted RBP6.31□□□□□ -1.4
VSNL1-203ENST00000406397 FRMD3A2A2Y4 597 aa6.31□□□□□ -1.4
VSNL1-203ENST00000406397 DTNBO60941 627 aa6.31□□□□□ -1.4
VSNL1-203ENST00000406397 PHACTR2O75167 634 aa6.31□□□□□ -1.4
VSNL1-203ENST00000406397 COQ9O75208 318 aa6.31□□□□□ -1.4
VSNL1-203ENST00000406397 RTN2O75298 545 aa6.31□□□□□ -1.4
VSNL1-203ENST00000406397 URI1O94763 535 aaPredicted RBP6.31□□□□□ -1.4
VSNL1-203ENST00000406397 NF2P35240 595 aa6.31□□□□□ -1.4
VSNL1-203ENST00000406397 MCM2P49736 904 aa6.31□□□□□ -1.4
VSNL1-203ENST00000406397 EIF4A1P60842 406 aaKnown RBP6.31□□□□□ -1.4
VSNL1-203ENST00000406397 PSMD2Q13200 908 aa6.31□□□□□ -1.4
VSNL1-203ENST00000406397 SNX1Q13596 522 aa6.31□□□□□ -1.4
VSNL1-203ENST00000406397 GNL2Q13823 731 aaKnown RBP6.31□□□□□ -1.4
VSNL1-203ENST00000406397 DNAJC14Q6Y2X3 702 aaPredicted RBP6.31□□□□□ -1.4
VSNL1-203ENST00000406397 NUP62CLQ9H1M0 184 aa6.31□□□□□ -1.4
VSNL1-203ENST00000406397 CPSF2Q9P2I0 782 aaKnown RBP6.31□□□□□ -1.4
VSNL1-203ENST00000406397 PALD1Q9ULE6 856 aa6.31□□□□□ -1.4
VSNL1-203ENST00000406397 SIPA1L3O60292 1781 aaPredicted RBP6.31□□□□□ -1.4
VSNL1-203ENST00000406397 ADAMTS7Q9UKP4 1686 aa6.31□□□□□ -1.4
VSNL1-203ENST00000406397 ANXA1P04083 346 aa6.31□□□□□ -1.4
VSNL1-203ENST00000406397 PDE6BP35913 854 aa6.31□□□□□ -1.4
VSNL1-203ENST00000406397 HOMER1Q86YM7 354 aa6.31□□□□□ -1.4
VSNL1-203ENST00000406397 IFNL1Q8IU54 200 aa6.31□□□□□ -1.4
VSNL1-203ENST00000406397 KIRREL3Q8IZU9 778 aa6.31□□□□□ -1.4
VSNL1-203ENST00000406397 GPR161Q8N6U8 529 aaKnown RBP6.31□□□□□ -1.4
VSNL1-203ENST00000406397 SH3GL3Q99963 347 aa6.31□□□□□ -1.4
VSNL1-203ENST00000406397 BCL9O00512 1426 aa6.3□□□□□ -1.4
VSNL1-203ENST00000406397 ERC2O15083 957 aa6.3□□□□□ -1.4
VSNL1-203ENST00000406397 ZBTB7BO15156 539 aaPredicted RBP6.3□□□□□ -1.4
VSNL1-203ENST00000406397 KINO60870 393 aaKnown RBP6.3□□□□□ -1.4
VSNL1-203ENST00000406397 VAMP4O75379 141 aa6.3□□□□□ -1.4
VSNL1-203ENST00000406397 F13A1P00488 732 aa6.3□□□□□ -1.4
VSNL1-203ENST00000406397 MTA1Q13330 715 aa6.3□□□□□ -1.4
VSNL1-203ENST00000406397 CRYMQ14894 314 aa6.3□□□□□ -1.4
VSNL1-203ENST00000406397 PARD3BQ8TEW8 1205 aa6.3□□□□□ -1.4
VSNL1-203ENST00000406397 BAG1Q99933 345 aaPredicted RBP6.3□□□□□ -1.4
VSNL1-203ENST00000406397 PAIP2Q9BPZ3 127 aaKnown RBP6.3□□□□□ -1.4
VSNL1-203ENST00000406397 UPF3BQ9BZI7 483 aaKnown RBP6.3□□□□□ -1.4
VSNL1-203ENST00000406397 TNMDQ9H2S6 317 aa6.3□□□□□ -1.4
VSNL1-203ENST00000406397 ODF2LQ9ULJ1 636 aa6.3□□□□□ -1.4
VSNL1-203ENST00000406397 MRC1P22897 1456 aa6.3□□□□□ -1.4
VSNL1-203ENST00000406397 STX6O43752 255 aa6.3□□□□□ -1.4
VSNL1-203ENST00000406397 FAM163BP0C2L3 166 aa6.3□□□□□ -1.4
VSNL1-203ENST00000406397 SYT1P21579 422 aa6.3□□□□□ -1.4
VSNL1-203ENST00000406397 ETF1P62495 437 aaKnown RBP6.3□□□□□ -1.4
VSNL1-203ENST00000406397 DDR1Q08345 913 aa6.3□□□□□ -1.4
VSNL1-203ENST00000406397 LRRFIP1Q32MZ4 808 aaKnown RBP6.3□□□□□ -1.4
VSNL1-203ENST00000406397 WWC2Q6AWC2 1192 aa6.3□□□□□ -1.4
VSNL1-203ENST00000406397 CASC1Q6TDU7 716 aa6.3□□□□□ -1.4
VSNL1-203ENST00000406397 FAM196AQ6ZSG2 479 aa6.3□□□□□ -1.4
VSNL1-203ENST00000406397 MICAL1Q8TDZ2 1067 aa6.3□□□□□ -1.4
VSNL1-203ENST00000406397 MRFAP1L1Q96HT8 127 aa6.3□□□□□ -1.4
VSNL1-203ENST00000406397 KIF9Q9HAQ2 790 aa6.3□□□□□ -1.4
VSNL1-203ENST00000406397 FAM169AQ9Y6X4 670 aa6.3□□□□□ -1.4
VSNL1-203ENST00000406397 MYO1FO00160 1098 aa6.29□□□□□ -1.4
VSNL1-203ENST00000406397 GIGYF1O75420 1035 aaPredicted RBP6.29□□□□□ -1.4
VSNL1-203ENST00000406397 IFIT2P09913 472 aaKnown RBP6.29□□□□□ -1.4
VSNL1-203ENST00000406397 FXR2P51116 673 aaKnown RBP eCLIP6.29□□□□□ -1.4
VSNL1-203ENST00000406397 TBC1D25Q3MII6 688 aa6.29□□□□□ -1.4
VSNL1-203ENST00000406397 PREPLQ4J6C6 727 aaPredicted RBP6.29□□□□□ -1.4
VSNL1-203ENST00000406397 KLHL23Q8NBE8 558 aa6.29□□□□□ -1.4
VSNL1-203ENST00000406397 ARMC2Q8NEN0 867 aa6.29□□□□□ -1.4
VSNL1-203ENST00000406397 ERCC4Q92889 916 aaPredicted RBP6.29□□□□□ -1.4
VSNL1-203ENST00000406397 CABS1Q96KC9 395 aa6.29□□□□□ -1.4
VSNL1-203ENST00000406397 FMNL2Q96PY5 1086 aa6.29□□□□□ -1.4
VSNL1-203ENST00000406397 SLC4A9Q96Q91 983 aa6.29□□□□□ -1.4
VSNL1-203ENST00000406397 FAM107BQ9H098 131 aa6.29□□□□□ -1.4
VSNL1-203ENST00000406397 SUGCTQ9HAC7 445 aa6.29□□□□□ -1.4
VSNL1-203ENST00000406397 SPATS2LQ9NUQ6 558 aaKnown RBP6.29□□□□□ -1.4
VSNL1-203ENST00000406397 PARP3Q9Y6F1 533 aa6.29□□□□□ -1.4
VSNL1-203ENST00000406397 KDM3BQ7LBC6 1761 aa6.29□□□□□ -1.4
VSNL1-203ENST00000406397 RDXP35241 583 aaKnown RBP6.29□□□□□ -1.4
VSNL1-203ENST00000406397 RPS6KA3P51812 740 aa6.29□□□□□ -1.4
VSNL1-203ENST00000406397 RWDD2BP57060 319 aa6.29□□□□□ -1.4
VSNL1-203ENST00000406397 EVX2Q03828 476 aa6.29□□□□□ -1.4
VSNL1-203ENST00000406397 HDGFL1Q5TGJ6 251 aa6.29□□□□□ -1.4
VSNL1-203ENST00000406397 VPS53Q5VIR6 699 aa6.29□□□□□ -1.4
VSNL1-203ENST00000406397 TRIM65Q6PJ69 517 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 125.7 ms