RNA–Protein interactions for RNA: ENST00000403441.1

PRAME-204, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 3

Gene PRAME, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-204ENST00000403441 FGFR2P21802 821 aa15.42■□□□□ 0.06
PRAME-204ENST00000403441 CAP1Q01518 475 aa15.42■□□□□ 0.06
PRAME-204ENST00000403441 PPIL2Q13356 520 aa15.42■□□□□ 0.06
PRAME-204ENST00000403441 APOBEC3HQ6NTF7 200 aaKnown RBP15.42■□□□□ 0.06
PRAME-204ENST00000403441 WDR66Q8TBY9 1149 aa15.42■□□□□ 0.06
PRAME-204ENST00000403441 ZKSCAN4Q969J2 545 aaPredicted RBP15.42■□□□□ 0.06
PRAME-204ENST00000403441 ZNF341Q9BYN7 854 aa15.42■□□□□ 0.06
PRAME-204ENST00000403441 MYH13Q9UKX3 1938 aa15.41■□□□□ 0.06
PRAME-204ENST00000403441 BTBD19C9JJ37 291 aa15.41■□□□□ 0.06
PRAME-204ENST00000403441 EYA2O00167 538 aa15.41■□□□□ 0.06
PRAME-204ENST00000403441 IRF6O14896 467 aa15.41■□□□□ 0.06
PRAME-204ENST00000403441 SLC4A8Q2Y0W8 1093 aa15.41■□□□□ 0.06
PRAME-204ENST00000403441 SSH1Q8WYL5 1049 aa15.41■□□□□ 0.06
PRAME-204ENST00000403441 LPIN2Q92539 896 aa15.41■□□□□ 0.06
PRAME-204ENST00000403441 USP44Q9H0E7 712 aa15.41■□□□□ 0.06
PRAME-204ENST00000403441 GNRH1P01148 92 aa15.4■□□□□ 0.06
PRAME-204ENST00000403441 LACTBP83111 547 aaPredicted RBP15.4■□□□□ 0.06
PRAME-204ENST00000403441 PPATQ06203 517 aa15.4■□□□□ 0.06
PRAME-204ENST00000403441 HABP4Q5JVS0 413 aaKnown RBP15.39■□□□□ 0.05
PRAME-204ENST00000403441 MIGA2Q7L4E1 593 aa15.39■□□□□ 0.05
PRAME-204ENST00000403441 FAM151AQ8WW52 585 aa15.39■□□□□ 0.05
PRAME-204ENST00000403441 GNL3LQ9NVN8 582 aaKnown RBP15.39■□□□□ 0.05
PRAME-204ENST00000403441 PRMT2P55345 433 aa15.38■□□□□ 0.05
PRAME-204ENST00000403441 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.38■□□□□ 0.05
PRAME-204ENST00000403441 ARHGAP39Q9C0H5 1083 aa15.38■□□□□ 0.05
PRAME-204ENST00000403441 DAGLAQ9Y4D2 1042 aa15.38■□□□□ 0.05
PRAME-204ENST00000403441 ZBED9Q6R2W3 1325 aa15.38■□□□□ 0.05
PRAME-204ENST00000403441 MYCP01106 439 aaPredicted RBP15.37■□□□□ 0.05
PRAME-204ENST00000403441 LDHBP07195 334 aaKnown RBP15.37■□□□□ 0.05
PRAME-204ENST00000403441 UBTFL1P0CB47 393 aaPredicted RBP15.37■□□□□ 0.05
PRAME-204ENST00000403441 INPP5BP32019 993 aa15.37■□□□□ 0.05
PRAME-204ENST00000403441 RFX5P48382 616 aaPredicted RBP15.37■□□□□ 0.05
PRAME-204ENST00000403441 TCP10Q12799 353 aa15.37■□□□□ 0.05
PRAME-204ENST00000403441 DIXDC1Q155Q3 683 aa15.37■□□□□ 0.05
PRAME-204ENST00000403441 ATP2B3Q16720 1220 aa15.37■□□□□ 0.05
PRAME-204ENST00000403441 CDC42EP5Q6NZY7 148 aa15.37■□□□□ 0.05
PRAME-204ENST00000403441 ANKRD23Q86SG2 305 aa15.37■□□□□ 0.05
PRAME-204ENST00000403441 SH3TC2Q8TF17 1288 aa15.37■□□□□ 0.05
PRAME-204ENST00000403441 SMC4Q9NTJ3 1288 aa15.37■□□□□ 0.05
PRAME-204ENST00000403441 FBXO3Q9UK99 471 aa15.37■□□□□ 0.05
PRAME-204ENST00000403441 PDHXO00330 501 aa15.36■□□□□ 0.05
PRAME-204ENST00000403441 CIAO1O76071 339 aa15.36■□□□□ 0.05
PRAME-204ENST00000403441 HNRNPUQ00839 825 aaKnown RBP eCLIP15.36■□□□□ 0.05
PRAME-204ENST00000403441 ATG9AQ7Z3C6 839 aa15.36■□□□□ 0.05
PRAME-204ENST00000403441 SIL1Q9H173 461 aa15.36■□□□□ 0.05
PRAME-204ENST00000403441 CEP126Q9P2H0 1117 aa15.36■□□□□ 0.05
PRAME-204ENST00000403441 HDAC5Q9UQL6 1122 aa15.36■□□□□ 0.05
PRAME-204ENST00000403441 ZSWIM8A7E2V4 1837 aa15.36■□□□□ 0.05
PRAME-204ENST00000403441 SEMA3EO15041 775 aa15.35■□□□□ 0.05
PRAME-204ENST00000403441 HOXD10P28358 340 aa15.35■□□□□ 0.05
PRAME-204ENST00000403441 PRDX5P30044 214 aa15.35■□□□□ 0.05
PRAME-204ENST00000403441 NOL9Q5SY16 702 aaKnown RBP15.35■□□□□ 0.05
PRAME-204ENST00000403441 USP40Q9NVE5 1235 aa15.35■□□□□ 0.05
PRAME-204ENST00000403441 CPA4Q9UI42 421 aa15.35■□□□□ 0.05
PRAME-204ENST00000403441 ZNF112Q9UJU3 913 aa15.35■□□□□ 0.05
PRAME-204ENST00000403441 KCNH4Q9UQ05 1017 aa15.35■□□□□ 0.05
PRAME-204ENST00000403441 SALL1Q9NSC2 1324 aa15.35■□□□□ 0.05
PRAME-204ENST00000403441 AK9Q5TCS8 1911 aa15.35■□□□□ 0.05
PRAME-204ENST00000403441 PSMC4P43686 418 aa15.34■□□□□ 0.05
PRAME-204ENST00000403441 RARSP54136 660 aaKnown RBP15.34■□□□□ 0.05
PRAME-204ENST00000403441 NFIAQ12857 509 aa15.34■□□□□ 0.05
PRAME-204ENST00000403441 C17orf99Q6UX52 265 aa15.34■□□□□ 0.05
PRAME-204ENST00000403441 ZGPATQ8N5A5 531 aaKnown RBP15.34■□□□□ 0.05
PRAME-204ENST00000403441 PARK7Q99497 189 aaKnown RBP15.34■□□□□ 0.05
PRAME-204ENST00000403441 DENND2AQ9ULE3 1009 aa15.34■□□□□ 0.05
PRAME-204ENST00000403441 ECM2O94769 699 aaPredicted RBP15.33■□□□□ 0.04
PRAME-204ENST00000403441 FMNL1O95466 1100 aaPredicted RBP15.33■□□□□ 0.04
PRAME-204ENST00000403441 IL15P40933 162 aaPredicted RBP15.33■□□□□ 0.04
PRAME-204ENST00000403441 RAET1EQ8TD07 263 aa15.33■□□□□ 0.04
PRAME-204ENST00000403441 TRIM47Q96LD4 638 aa15.33■□□□□ 0.04
PRAME-204ENST00000403441 PICK1Q9NRD5 415 aa15.33■□□□□ 0.04
PRAME-204ENST00000403441 FAM198AQ9UFP1 575 aa15.33■□□□□ 0.04
PRAME-204ENST00000403441 SRRDQ9UH36 339 aa15.33■□□□□ 0.04
PRAME-204ENST00000403441 CEP290O15078 2479 aa15.33■□□□□ 0.04
PRAME-204ENST00000403441 DOCK2Q92608 1830 aa15.32■□□□□ 0.04
PRAME-204ENST00000403441 DZIP1Q86YF9 867 aaKnown RBP15.32■□□□□ 0.04
PRAME-204ENST00000403441 ADGRA2Q96PE1 1338 aa15.32■□□□□ 0.04
PRAME-204ENST00000403441 CXCL11O14625 94 aa15.31■□□□□ 0.04
PRAME-204ENST00000403441 OSBPP22059 807 aa15.31■□□□□ 0.04
PRAME-204ENST00000403441 GRK4P32298 578 aa15.31■□□□□ 0.04
PRAME-204ENST00000403441 PHKA1P46020 1223 aa15.31■□□□□ 0.04
PRAME-204ENST00000403441 ZSCAN29Q8IWY8 852 aaPredicted RBP15.31■□□□□ 0.04
PRAME-204ENST00000403441 SLF2Q8IX21 1173 aa15.31■□□□□ 0.04
PRAME-204ENST00000403441 NKX2-3Q8TAU0 364 aa15.31■□□□□ 0.04
PRAME-204ENST00000403441 MYPNQ86TC9 1320 aa15.31■□□□□ 0.04
PRAME-204ENST00000403441 ENTPD3O75355 529 aa15.3■□□□□ 0.04
PRAME-204ENST00000403441 RGS3P49796 1198 aa15.3■□□□□ 0.04
PRAME-204ENST00000403441 FCGRTP55899 365 aa15.3■□□□□ 0.04
PRAME-204ENST00000403441 MOGSQ13724 837 aa15.3■□□□□ 0.04
PRAME-204ENST00000403441 CCDC102BQ68D86 513 aa15.3■□□□□ 0.04
PRAME-204ENST00000403441 FASTKD5Q7L8L6 764 aaKnown RBP15.3■□□□□ 0.04
PRAME-204ENST00000403441 SCYL3Q8IZE3 742 aa15.3■□□□□ 0.04
PRAME-204ENST00000403441 ARHGAP45Q92619 1136 aa15.3■□□□□ 0.04
PRAME-204ENST00000403441 IDI2Q9BXS1 227 aa15.3■□□□□ 0.04
PRAME-204ENST00000403441 API5Q9BZZ5 524 aaKnown RBP15.3■□□□□ 0.04
PRAME-204ENST00000403441 BIN2Q9UBW5 565 aaPredicted RBP15.3■□□□□ 0.04
PRAME-204ENST00000403441 LRRFIP2Q9Y608 721 aaKnown RBP15.3■□□□□ 0.04
PRAME-204ENST00000403441 ATRNL1Q5VV63 1379 aa15.29■□□□□ 0.04
PRAME-204ENST00000403441 GAKO14976 1311 aa15.29■□□□□ 0.04
PRAME-204ENST00000403441 PDS5AQ29RF7 1337 aaKnown RBP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms