RNA–Protein interactions for RNA: ENST00000401605.5

CLIP4-202, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2 BASIC

Gene CLIP4, Length 2,322 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-202ENST00000401605 ERBB4Q15303 1308 aa7.28□□□□□ -1.24
CLIP4-202ENST00000401605 NRXN2Q9P2S2 1712 aa7.28□□□□□ -1.24
CLIP4-202ENST00000401605 CEP350Q5VT06 3117 aa7.28□□□□□ -1.24
CLIP4-202ENST00000401605 PPP1R3GB7ZBB8 358 aa7.28□□□□□ -1.24
CLIP4-202ENST00000401605 PES1O00541 588 aaKnown RBP7.28□□□□□ -1.24
CLIP4-202ENST00000401605 MAP3K7O43318 606 aa7.28□□□□□ -1.24
CLIP4-202ENST00000401605 MRPL58Q14197 206 aaKnown RBP7.28□□□□□ -1.24
CLIP4-202ENST00000401605 C11orf91Q3C1V1 193 aa7.28□□□□□ -1.24
CLIP4-202ENST00000401605 ERFEQ4G0M1 354 aa7.28□□□□□ -1.24
CLIP4-202ENST00000401605 SMC1BQ8NDV3 1235 aa7.28□□□□□ -1.24
CLIP4-202ENST00000401605 NYXQ9GZU5 481 aa7.28□□□□□ -1.24
CLIP4-202ENST00000401605 MAP3K15Q6ZN16 1313 aa7.28□□□□□ -1.24
CLIP4-202ENST00000401605 SCAMP3O14828 347 aaKnown RBP7.27□□□□□ -1.25
CLIP4-202ENST00000401605 MYL6BP14649 208 aa7.27□□□□□ -1.25
CLIP4-202ENST00000401605 ABCD1P33897 745 aa7.27□□□□□ -1.25
CLIP4-202ENST00000401605 TMPOP42166 694 aaKnown RBP7.27□□□□□ -1.25
CLIP4-202ENST00000401605 ZNF211Q13398 564 aaPredicted RBP7.27□□□□□ -1.25
CLIP4-202ENST00000401605 ICE2Q659A1 982 aa7.27□□□□□ -1.25
CLIP4-202ENST00000401605 ZBED9Q6R2W3 1325 aa7.27□□□□□ -1.25
CLIP4-202ENST00000401605 MORC4Q8TE76 937 aa7.27□□□□□ -1.25
CLIP4-202ENST00000401605 LRRN4Q8WUT4 740 aa7.27□□□□□ -1.25
CLIP4-202ENST00000401605 METTL14Q9HCE5 456 aaKnown RBP7.27□□□□□ -1.25
CLIP4-202ENST00000401605 ABCF2Q9UG63 623 aa7.27□□□□□ -1.25
CLIP4-202ENST00000401605 SYNRGQ9UMZ2 1314 aa7.27□□□□□ -1.25
CLIP4-202ENST00000401605 FAM177BA6PVY3 158 aa7.27□□□□□ -1.25
CLIP4-202ENST00000401605 SMAPO00193 183 aa7.27□□□□□ -1.25
CLIP4-202ENST00000401605 SH3BP5O60239 455 aa7.27□□□□□ -1.25
CLIP4-202ENST00000401605 EVI5O60447 810 aa7.27□□□□□ -1.25
CLIP4-202ENST00000401605 ATP2B4P23634 1241 aa7.27□□□□□ -1.25
CLIP4-202ENST00000401605 ALDH1B1P30837 517 aa7.27□□□□□ -1.25
CLIP4-202ENST00000401605 HMGN5P82970 282 aaKnown RBP7.27□□□□□ -1.25
CLIP4-202ENST00000401605 CCDC93Q567U6 631 aa7.27□□□□□ -1.25
CLIP4-202ENST00000401605 TTLL7Q6ZT98 887 aa7.27□□□□□ -1.25
CLIP4-202ENST00000401605 METTL16Q86W50 562 aaKnown RBP7.27□□□□□ -1.25
CLIP4-202ENST00000401605 C7orf43Q8WVR3 580 aa7.27□□□□□ -1.25
CLIP4-202ENST00000401605 CCDC85AQ96PX6 553 aaPredicted RBP7.27□□□□□ -1.25
CLIP4-202ENST00000401605 SCN7AQ01118 1682 aa7.26□□□□□ -1.25
CLIP4-202ENST00000401605 CCDC189A1A4V9 331 aa7.26□□□□□ -1.25
CLIP4-202ENST00000401605 H0YHG0 523 aa7.26□□□□□ -1.25
CLIP4-202ENST00000401605 H3BRB1 525 aa7.26□□□□□ -1.25
CLIP4-202ENST00000401605 SETSIPP0DME0 302 aa7.26□□□□□ -1.25
CLIP4-202ENST00000401605 GUCY2CP25092 1073 aa7.26□□□□□ -1.25
CLIP4-202ENST00000401605 MAPK1P28482 360 aa7.26□□□□□ -1.25
CLIP4-202ENST00000401605 SARNPP82979 210 aaKnown RBP7.26□□□□□ -1.25
CLIP4-202ENST00000401605 GABPB1Q06547 395 aaPredicted RBP7.26□□□□□ -1.25
CLIP4-202ENST00000401605 WDR43Q15061 677 aaKnown RBP eCLIP7.26□□□□□ -1.25
CLIP4-202ENST00000401605 CRY2Q49AN0 593 aa7.26□□□□□ -1.25
CLIP4-202ENST00000401605 MICALL2Q8IY33 904 aa7.26□□□□□ -1.25
CLIP4-202ENST00000401605 DEPDC4Q8N2C3 294 aa7.26□□□□□ -1.25
CLIP4-202ENST00000401605 ZBTB3Q9H5J0 574 aa7.26□□□□□ -1.25
CLIP4-202ENST00000401605 TUT1Q9H6E5 874 aaKnown RBP7.26□□□□□ -1.25
CLIP4-202ENST00000401605 ADGRG1Q9Y653 693 aa7.26□□□□□ -1.25
CLIP4-202ENST00000401605 DDX49Q9Y6V7 483 aaKnown RBP7.26□□□□□ -1.25
CLIP4-202ENST00000401605 SIPA1L3O60292 1781 aaPredicted RBP7.26□□□□□ -1.25
CLIP4-202ENST00000401605 IBTKQ9P2D0 1353 aaPredicted RBP7.26□□□□□ -1.25
CLIP4-202ENST00000401605 RAD50Q92878 1312 aa7.26□□□□□ -1.25
CLIP4-202ENST00000401605 ABL1P00519 1130 aa7.26□□□□□ -1.25
CLIP4-202ENST00000401605 OATP04181 439 aa7.26□□□□□ -1.25
CLIP4-202ENST00000401605 FAM200BP0CF97 657 aa7.26□□□□□ -1.25
CLIP4-202ENST00000401605 RTKN2Q8IZC4 609 aa7.26□□□□□ -1.25
CLIP4-202ENST00000401605 RUNDC1Q96C34 613 aa7.26□□□□□ -1.25
CLIP4-202ENST00000401605 ZSWIM4Q9H7M6 989 aa7.26□□□□□ -1.25
CLIP4-202ENST00000401605 ARHGEF10LQ9HCE6 1279 aa7.26□□□□□ -1.25
CLIP4-202ENST00000401605 CCDC196A0A1B0GTZ2 297 aa7.25□□□□□ -1.25
CLIP4-202ENST00000401605 CCP110O43303 1012 aa7.25□□□□□ -1.25
CLIP4-202ENST00000401605 EIF2S2P20042 333 aaKnown RBP7.25□□□□□ -1.25
CLIP4-202ENST00000401605 PEX19P40855 299 aa7.25□□□□□ -1.25
CLIP4-202ENST00000401605 TNNI2P48788 182 aa7.25□□□□□ -1.25
CLIP4-202ENST00000401605 FKBP4Q02790 459 aaKnown RBP eCLIP7.25□□□□□ -1.25
CLIP4-202ENST00000401605 PARP10Q53GL7 1025 aa7.25□□□□□ -1.25
CLIP4-202ENST00000401605 JAZF1Q86VZ6 243 aa7.25□□□□□ -1.25
CLIP4-202ENST00000401605 NUTM1Q86Y26 1132 aa7.25□□□□□ -1.25
CLIP4-202ENST00000401605 REM2Q8IYK8 340 aaPredicted RBP7.25□□□□□ -1.25
CLIP4-202ENST00000401605 DNAJC5GQ8N7S2 189 aa7.25□□□□□ -1.25
CLIP4-202ENST00000401605 FAM161BQ96MY7 647 aa7.25□□□□□ -1.25
CLIP4-202ENST00000401605 NOL10Q9BSC4 688 aaKnown RBP7.25□□□□□ -1.25
CLIP4-202ENST00000401605 GABBR1Q9UBS5 961 aa7.25□□□□□ -1.25
CLIP4-202ENST00000401605 ISY1Q9ULR0 285 aaKnown RBP7.25□□□□□ -1.25
CLIP4-202ENST00000401605 SUFUQ9UMX1 484 aa7.25□□□□□ -1.25
CLIP4-202ENST00000401605 BRCA1P38398 1863 aaKnown RBP7.25□□□□□ -1.25
CLIP4-202ENST00000401605 UBN2Q6ZU65 1347 aa7.25□□□□□ -1.25
CLIP4-202ENST00000401605 ARFGEF1Q9Y6D6 1849 aa7.24□□□□□ -1.25
CLIP4-202ENST00000401605 UQCRHLA0A096LP55 91 aa7.24□□□□□ -1.25
CLIP4-202ENST00000401605 USP17L3A6NCW0 530 aa7.24□□□□□ -1.25
CLIP4-202ENST00000401605 USP17L4A6NCW7 530 aa7.24□□□□□ -1.25
CLIP4-202ENST00000401605 UQCRHP07919 91 aa7.24□□□□□ -1.25
CLIP4-202ENST00000401605 ATP2B1P20020 1258 aa7.24□□□□□ -1.25
CLIP4-202ENST00000401605 GPTP24298 496 aa7.24□□□□□ -1.25
CLIP4-202ENST00000401605 NOP2P46087 812 aaKnown RBP7.24□□□□□ -1.25
CLIP4-202ENST00000401605 HSP90B2PQ58FF3 399 aa7.24□□□□□ -1.25
CLIP4-202ENST00000401605 USP17L2Q6R6M4 530 aa7.24□□□□□ -1.25
CLIP4-202ENST00000401605 MAMSTRQ6ZN01 415 aa7.24□□□□□ -1.25
CLIP4-202ENST00000401605 USP17L1Q7RTZ2 530 aa7.24□□□□□ -1.25
CLIP4-202ENST00000401605 LRP10Q7Z4F1 713 aa7.24□□□□□ -1.25
CLIP4-202ENST00000401605 PPP1R42Q7Z4L9 355 aa7.24□□□□□ -1.25
CLIP4-202ENST00000401605 CCDC146Q8IYE0 955 aa7.24□□□□□ -1.25
CLIP4-202ENST00000401605 ZNF34Q8IZ26 560 aa7.24□□□□□ -1.25
CLIP4-202ENST00000401605 CLP1Q92989 425 aaKnown RBP7.24□□□□□ -1.25
CLIP4-202ENST00000401605 DMGDHQ9UI17 866 aaKnown RBP7.24□□□□□ -1.25
CLIP4-202ENST00000401605 FAN1Q9Y2M0 1017 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms