RNA–Protein interactions for RNA: ENST00000400772.6

ATG4B-203, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-203ENST00000400772 FPGT-TNNI3KV9GXZ4 949 aa19.56■□□□□ 0.72
ATG4B-203ENST00000400772 GAKO14976 1311 aa19.55■□□□□ 0.72
ATG4B-203ENST00000400772 ZBTB48P10074 688 aaPredicted RBP19.55■□□□□ 0.72
ATG4B-203ENST00000400772 GORABQ5T7V8 394 aa19.55■□□□□ 0.72
ATG4B-203ENST00000400772 SPATA5Q8NB90 893 aa19.55■□□□□ 0.72
ATG4B-203ENST00000400772 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.55■□□□□ 0.72
ATG4B-203ENST00000400772 ZNF384Q8TF68 577 aa19.55■□□□□ 0.72
ATG4B-203ENST00000400772 USP40Q9NVE5 1235 aa19.55■□□□□ 0.72
ATG4B-203ENST00000400772 TBC1D8O95759 1140 aa19.54■□□□□ 0.72
ATG4B-203ENST00000400772 MS4A1P11836 297 aa19.54■□□□□ 0.72
ATG4B-203ENST00000400772 MCAMP43121 646 aa19.54■□□□□ 0.72
ATG4B-203ENST00000400772 MAP3K9P80192 1104 aa19.54■□□□□ 0.72
ATG4B-203ENST00000400772 SREBF2Q12772 1141 aa19.54■□□□□ 0.72
ATG4B-203ENST00000400772 OS9Q13438 667 aaPredicted RBP19.54■□□□□ 0.72
ATG4B-203ENST00000400772 TBC1D9Q6ZT07 1266 aa19.54■□□□□ 0.72
ATG4B-203ENST00000400772 FAM151AQ8WW52 585 aa19.54■□□□□ 0.72
ATG4B-203ENST00000400772 FAM163AQ96GL9 167 aaPredicted RBP19.54■□□□□ 0.72
ATG4B-203ENST00000400772 ABHD8Q96I13 439 aa19.54■□□□□ 0.72
ATG4B-203ENST00000400772 DBNDD2Q9BQY9 259 aa19.54■□□□□ 0.72
ATG4B-203ENST00000400772 ELP3Q9H9T3 547 aa19.54■□□□□ 0.72
ATG4B-203ENST00000400772 FAM198AQ9UFP1 575 aa19.54■□□□□ 0.72
ATG4B-203ENST00000400772 OTOFQ9HC10 1997 aa19.53■□□□□ 0.72
ATG4B-203ENST00000400772 MANSC4A6NHS7 340 aaPredicted RBP19.53■□□□□ 0.72
ATG4B-203ENST00000400772 MECOMQ03112 1051 aa19.53■□□□□ 0.72
ATG4B-203ENST00000400772 TCP10Q12799 353 aa19.53■□□□□ 0.72
ATG4B-203ENST00000400772 VGLL4Q14135 290 aa19.53■□□□□ 0.72
ATG4B-203ENST00000400772 SPTY2D1Q68D10 685 aaPredicted RBP19.53■□□□□ 0.72
ATG4B-203ENST00000400772 ZFPM1Q8IX07 1006 aa19.53■□□□□ 0.72
ATG4B-203ENST00000400772 R3HDMLQ9H3Y0 253 aa19.53■□□□□ 0.72
ATG4B-203ENST00000400772 COG6Q9Y2V7 657 aa19.53■□□□□ 0.72
ATG4B-203ENST00000400772 RPAP1Q9BWH6 1393 aaPredicted RBP19.53■□□□□ 0.72
ATG4B-203ENST00000400772 INHBEP58166 350 aa19.52■□□□□ 0.72
ATG4B-203ENST00000400772 ERICH6Q7L0X2 663 aa19.52■□□□□ 0.72
ATG4B-203ENST00000400772 DZIP1Q86YF9 867 aaKnown RBP19.52■□□□□ 0.72
ATG4B-203ENST00000400772 CNKSR2Q8WXI2 1034 aa19.52■□□□□ 0.72
ATG4B-203ENST00000400772 OPTNQ96CV9 577 aa19.52■□□□□ 0.72
ATG4B-203ENST00000400772 MCOLN1Q9GZU1 580 aa19.52■□□□□ 0.72
ATG4B-203ENST00000400772 MYH2Q9UKX2 1941 aa19.52■□□□□ 0.72
ATG4B-203ENST00000400772 UQCRFS1P1P0C7P4 283 aa19.51■□□□□ 0.71
ATG4B-203ENST00000400772 MIGA2Q7L4E1 593 aa19.51■□□□□ 0.71
ATG4B-203ENST00000400772 IFNL1Q8IU54 200 aa19.51■□□□□ 0.71
ATG4B-203ENST00000400772 NSUN4Q96CB9 384 aaKnown RBP19.51■□□□□ 0.71
ATG4B-203ENST00000400772 EAF2Q96CJ1 260 aaPredicted RBP19.51■□□□□ 0.71
ATG4B-203ENST00000400772 CFHR5Q9BXR6 569 aa19.51■□□□□ 0.71
ATG4B-203ENST00000400772 IDI2Q9BXS1 227 aa19.51■□□□□ 0.71
ATG4B-203ENST00000400772 ZBTB40Q9NUA8 1239 aa19.51■□□□□ 0.71
ATG4B-203ENST00000400772 GPR75-ASB3A0A0A6YYF3 556 aa19.5■□□□□ 0.71
ATG4B-203ENST00000400772 TESPA1A2RU30 521 aaPredicted RBP19.5■□□□□ 0.71
ATG4B-203ENST00000400772 IGF2BP3O00425 579 aaKnown RBP eCLIP19.5■□□□□ 0.71
ATG4B-203ENST00000400772 DGKZQ13574 1117 aa19.5■□□□□ 0.71
ATG4B-203ENST00000400772 MS4A4AQ96JQ5 239 aa19.5■□□□□ 0.71
ATG4B-203ENST00000400772 PTPN18Q99952 460 aa19.5■□□□□ 0.71
ATG4B-203ENST00000400772 SNRKQ9NRH2 765 aa19.5■□□□□ 0.71
ATG4B-203ENST00000400772 TLR7Q9NYK1 1049 aaKnown RBP19.5■□□□□ 0.71
ATG4B-203ENST00000400772 DBNLQ9UJU6 430 aaKnown RBP19.5■□□□□ 0.71
ATG4B-203ENST00000400772 DDX19BQ9UMR2 479 aa19.5■□□□□ 0.71
ATG4B-203ENST00000400772 EXOC6BQ9Y2D4 811 aa19.5■□□□□ 0.71
ATG4B-203ENST00000400772 SNCAIPQ9Y6H5 919 aa19.5■□□□□ 0.71
ATG4B-203ENST00000400772 MROH7-TTC4A0A0A0MT08 1334 aa19.5■□□□□ 0.71
ATG4B-203ENST00000400772 RFX7Q2KHR2 1363 aa19.49■□□□□ 0.71
ATG4B-203ENST00000400772 WDHD1O75717 1129 aaPredicted RBP19.49■□□□□ 0.71
ATG4B-203ENST00000400772 BTDP43251 543 aa19.49■□□□□ 0.71
ATG4B-203ENST00000400772 CCDC158Q5M9N0 1113 aa19.49■□□□□ 0.71
ATG4B-203ENST00000400772 TTC39AQ5SRH9 613 aa19.49■□□□□ 0.71
ATG4B-203ENST00000400772 C20orf194Q5TEA3 1177 aa19.49■□□□□ 0.71
ATG4B-203ENST00000400772 SLF2Q8IX21 1173 aa19.49■□□□□ 0.71
ATG4B-203ENST00000400772 SIRT2Q8IXJ6 389 aa19.49■□□□□ 0.71
ATG4B-203ENST00000400772 ZKSCAN4Q969J2 545 aaPredicted RBP19.49■□□□□ 0.71
ATG4B-203ENST00000400772 HOOK2Q96ED9 719 aa19.49■□□□□ 0.71
ATG4B-203ENST00000400772 ZNF512BQ96KM6 892 aaPredicted RBP19.49■□□□□ 0.71
ATG4B-203ENST00000400772 WRNIP1Q96S55 665 aa19.49■□□□□ 0.71
ATG4B-203ENST00000400772 CCDC8Q9H0W5 538 aaPredicted RBP19.49■□□□□ 0.71
ATG4B-203ENST00000400772 LAMB1P07942 1786 aa19.49■□□□□ 0.71
ATG4B-203ENST00000400772 GPR25O00155 361 aa19.48■□□□□ 0.71
ATG4B-203ENST00000400772 RGS3P49796 1198 aa19.48■□□□□ 0.71
ATG4B-203ENST00000400772 RHBDL3P58872 404 aa19.48■□□□□ 0.71
ATG4B-203ENST00000400772 NOM1Q5C9Z4 860 aaKnown RBP19.48■□□□□ 0.71
ATG4B-203ENST00000400772 DCAF15Q66K64 600 aa19.48■□□□□ 0.71
ATG4B-203ENST00000400772 SH3BP5LQ7L8J4 393 aa19.48■□□□□ 0.71
ATG4B-203ENST00000400772 RPAP2Q8IXW5 612 aaPredicted RBP19.48■□□□□ 0.71
ATG4B-203ENST00000400772 ZNF296Q8WUU4 475 aaPredicted RBP19.48■□□□□ 0.71
ATG4B-203ENST00000400772 ZNF341Q9BYN7 854 aa19.48■□□□□ 0.71
ATG4B-203ENST00000400772 DDX4Q9NQI0 724 aaKnown RBP19.48■□□□□ 0.71
ATG4B-203ENST00000400772 ZNF112Q9UJU3 913 aa19.48■□□□□ 0.71
ATG4B-203ENST00000400772 CSADQ9Y600 493 aa19.48■□□□□ 0.71
ATG4B-203ENST00000400772 ENTPD3O75355 529 aa19.47■□□□□ 0.71
ATG4B-203ENST00000400772 ALDH1A1P00352 501 aa19.47■□□□□ 0.71
ATG4B-203ENST00000400772 RAI14Q9P0K7 980 aa19.47■□□□□ 0.71
ATG4B-203ENST00000400772 ATRNL1Q5VV63 1379 aa19.46■□□□□ 0.71
ATG4B-203ENST00000400772 SPDYE5A6NIY4 337 aa19.46■□□□□ 0.71
ATG4B-203ENST00000400772 CYP2E1P05181 493 aaPredicted RBP19.46■□□□□ 0.71
ATG4B-203ENST00000400772 INPP5BP32019 993 aa19.46■□□□□ 0.71
ATG4B-203ENST00000400772 OTUD5Q96G74 571 aa19.46■□□□□ 0.71
ATG4B-203ENST00000400772 LRP2BPQ9P2M1 347 aa19.46■□□□□ 0.71
ATG4B-203ENST00000400772 DDTLA6NHG4 134 aaPredicted RBP19.45■□□□□ 0.7
ATG4B-203ENST00000400772 LDHCP07864 332 aa19.45■□□□□ 0.7
ATG4B-203ENST00000400772 ZAP70P43403 619 aa19.45■□□□□ 0.7
ATG4B-203ENST00000400772 GSTO1P78417 241 aa19.45■□□□□ 0.7
ATG4B-203ENST00000400772 PDE3AQ14432 1141 aa19.45■□□□□ 0.7
ATG4B-203ENST00000400772 ERO1BQ86YB8 467 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms