RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 TMEM247A6NEH6 219 aa9.55□□□□□ -0.88
CACNA1C-220ENST00000399655 NAP1L4Q99733 375 aaKnown RBP9.55□□□□□ -0.88
CACNA1C-220ENST00000399655 AGTPBP1Q9UPW5 1226 aa9.55□□□□□ -0.88
CACNA1C-220ENST00000399655 TRIM71Q2Q1W2 868 aaKnown RBP9.55□□□□□ -0.88
CACNA1C-220ENST00000399655 TPCN1Q9ULQ1 816 aa9.55□□□□□ -0.88
CACNA1C-220ENST00000399655 ATAD3BQ5T9A4 648 aa9.55□□□□□ -0.88
CACNA1C-220ENST00000399655 PARP2Q9UGN5 583 aa9.55□□□□□ -0.88
CACNA1C-220ENST00000399655 KLHL14Q9P2G3 628 aa9.55□□□□□ -0.88
CACNA1C-220ENST00000399655 ATP8A1Q9Y2Q0 1164 aa9.55□□□□□ -0.88
CACNA1C-220ENST00000399655 ST13P4Q8IZP2 240 aaPredicted RBP9.55□□□□□ -0.88
CACNA1C-220ENST00000399655 TRIM15Q9C019 465 aa9.55□□□□□ -0.88
CACNA1C-220ENST00000399655 RWDD3Q9Y3V2 267 aa9.55□□□□□ -0.88
CACNA1C-220ENST00000399655 S100A9P06702 114 aaKnown RBP9.55□□□□□ -0.88
CACNA1C-220ENST00000399655 SERPINB6P35237 376 aa9.55□□□□□ -0.88
CACNA1C-220ENST00000399655 FLCNQ8NFG4 579 aa9.55□□□□□ -0.88
CACNA1C-220ENST00000399655 MPHOSPH8Q99549 860 aa9.55□□□□□ -0.88
CACNA1C-220ENST00000399655 MIS12Q9H081 205 aa9.55□□□□□ -0.88
CACNA1C-220ENST00000399655 KRR1Q13601 381 aaKnown RBP9.55□□□□□ -0.88
CACNA1C-220ENST00000399655 ZSCAN29Q8IWY8 852 aaPredicted RBP9.54□□□□□ -0.88
CACNA1C-220ENST00000399655 RRP36Q96EU6 259 aaKnown RBP9.54□□□□□ -0.88
CACNA1C-220ENST00000399655 VEZTQ9HBM0 779 aa9.54□□□□□ -0.88
CACNA1C-220ENST00000399655 SSFA2P28290 1259 aa9.54□□□□□ -0.88
CACNA1C-220ENST00000399655 SNCBQ16143 134 aa9.54□□□□□ -0.88
CACNA1C-220ENST00000399655 PHF21AQ96BD5 680 aa9.54□□□□□ -0.88
CACNA1C-220ENST00000399655 CRBNQ96SW2 442 aa9.54□□□□□ -0.88
CACNA1C-220ENST00000399655 MCF2P10911 925 aa9.54□□□□□ -0.88
CACNA1C-220ENST00000399655 MMEL1Q495T6 779 aa9.54□□□□□ -0.88
CACNA1C-220ENST00000399655 EVC2Q86UK5 1308 aa9.54□□□□□ -0.88
CACNA1C-220ENST00000399655 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.54□□□□□ -0.882e-6■■■■■ 45.2
CACNA1C-220ENST00000399655 TSC1Q92574 1164 aa9.54□□□□□ -0.88
CACNA1C-220ENST00000399655 ZNF277Q9NRM2 450 aaPredicted RBP9.54□□□□□ -0.88
CACNA1C-220ENST00000399655 LZICQ8WZA0 190 aa9.54□□□□□ -0.88
CACNA1C-220ENST00000399655 PDRG1Q9NUG6 133 aa9.54□□□□□ -0.88
CACNA1C-220ENST00000399655 INTS13Q9NVM9 706 aa9.54□□□□□ -0.88
CACNA1C-220ENST00000399655 TUBGCP3Q96CW5 907 aa9.54□□□□□ -0.88
CACNA1C-220ENST00000399655 MRFAP1Q9Y605 127 aa9.54□□□□□ -0.88
CACNA1C-220ENST00000399655 EEF1B2P24534 225 aaKnown RBP9.54□□□□□ -0.88
CACNA1C-220ENST00000399655 NUP62P37198 522 aaPredicted RBP9.54□□□□□ -0.88
CACNA1C-220ENST00000399655 UAP1Q16222 522 aaPredicted RBP9.54□□□□□ -0.88
CACNA1C-220ENST00000399655 KRT74Q7RTS7 529 aa9.54□□□□□ -0.88
CACNA1C-220ENST00000399655 ITM2BQ9Y287 266 aa9.54□□□□□ -0.88
CACNA1C-220ENST00000399655 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.54□□□□□ -0.88
CACNA1C-220ENST00000399655 PPP2R5EQ16537 467 aa9.54□□□□□ -0.88
CACNA1C-220ENST00000399655 ACBD5Q5T8D3 534 aaPredicted RBP9.54□□□□□ -0.88
CACNA1C-220ENST00000399655 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.54□□□□□ -0.88
CACNA1C-220ENST00000399655 COG6Q9Y2V7 657 aa9.54□□□□□ -0.88
CACNA1C-220ENST00000399655 SNTNA6NMZ2 147 aa9.54□□□□□ -0.88
CACNA1C-220ENST00000399655 KDM1AO60341 852 aa9.54□□□□□ -0.88
CACNA1C-220ENST00000399655 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.54□□□□□ -0.88
CACNA1C-220ENST00000399655 AMOTL2Q9Y2J4 779 aa9.54□□□□□ -0.88
CACNA1C-220ENST00000399655 GNGT2O14610 69 aa9.53□□□□□ -0.88
CACNA1C-220ENST00000399655 MYSM1Q5VVJ2 828 aa9.53□□□□□ -0.88
CACNA1C-220ENST00000399655 VPS37BQ9H9H4 285 aa9.53□□□□□ -0.88
CACNA1C-220ENST00000399655 VPS37AQ8NEZ2 397 aa9.53□□□□□ -0.88
CACNA1C-220ENST00000399655 STAC3Q96MF2 364 aa9.53□□□□□ -0.88
CACNA1C-220ENST00000399655 RAB3GAP1Q15042 981 aa9.53□□□□□ -0.88
CACNA1C-220ENST00000399655 USH1GQ495M9 461 aa9.53□□□□□ -0.88
CACNA1C-220ENST00000399655 NME8Q8N427 588 aa9.53□□□□□ -0.88
CACNA1C-220ENST00000399655 CABS1Q96KC9 395 aa9.53□□□□□ -0.88
CACNA1C-220ENST00000399655 DHX29Q7Z478 1369 aaKnown RBP9.53□□□□□ -0.88
CACNA1C-220ENST00000399655 F8W8V4 182 aa9.53□□□□□ -0.88
CACNA1C-220ENST00000399655 GABPB1Q06547 395 aaPredicted RBP9.53□□□□□ -0.88
CACNA1C-220ENST00000399655 SIRT1Q96EB6 747 aa9.53□□□□□ -0.88
CACNA1C-220ENST00000399655 CCDC144AA2RUR9 1427 aa9.53□□□□□ -0.88
CACNA1C-220ENST00000399655 RASSF10A6NK89 507 aa9.53□□□□□ -0.88
CACNA1C-220ENST00000399655 BBOF1Q8ND07 529 aa9.53□□□□□ -0.88
CACNA1C-220ENST00000399655 RNF41Q9H4P4 317 aaPredicted RBP9.53□□□□□ -0.88
CACNA1C-220ENST00000399655 TMOD4Q9NZQ9 345 aa9.53□□□□□ -0.88
CACNA1C-220ENST00000399655 N4BP3O15049 544 aa9.53□□□□□ -0.88
CACNA1C-220ENST00000399655 KRT6AP02538 564 aa9.53□□□□□ -0.88
CACNA1C-220ENST00000399655 KRT6BP04259 564 aa9.53□□□□□ -0.88
CACNA1C-220ENST00000399655 KRT6CP48668 564 aa9.53□□□□□ -0.88
CACNA1C-220ENST00000399655 AIPL1Q9NZN9 384 aa9.53□□□□□ -0.88
CACNA1C-220ENST00000399655 RAD50Q92878 1312 aa9.53□□□□□ -0.88
CACNA1C-220ENST00000399655 SMCO2A6NFE2 343 aa9.53□□□□□ -0.88
CACNA1C-220ENST00000399655 PLIN1O60240 522 aa9.53□□□□□ -0.88
CACNA1C-220ENST00000399655 C8orf76Q96K31 380 aa9.53□□□□□ -0.88
CACNA1C-220ENST00000399655 CCDC15Q0P6D6 951 aa9.52□□□□□ -0.88
CACNA1C-220ENST00000399655 CYP26C1Q6V0L0 522 aa9.52□□□□□ -0.88
CACNA1C-220ENST00000399655 TRMT1Q9NXH9 659 aaKnown RBP9.52□□□□□ -0.88
CACNA1C-220ENST00000399655 SFMBT1Q9UHJ3 866 aa9.52□□□□□ -0.88
CACNA1C-220ENST00000399655 GSTA1P08263 222 aa9.52□□□□□ -0.88
CACNA1C-220ENST00000399655 GSTA2P09210 222 aa9.52□□□□□ -0.88
CACNA1C-220ENST00000399655 KIF2CQ99661 725 aa9.52□□□□□ -0.88
CACNA1C-220ENST00000399655 BAZ1AQ9NRL2 1556 aaPredicted RBP9.52□□□□□ -0.88
CACNA1C-220ENST00000399655 S100BP04271 92 aaPredicted RBP9.52□□□□□ -0.88
CACNA1C-220ENST00000399655 GNAI2P04899 355 aa9.52□□□□□ -0.88
CACNA1C-220ENST00000399655 MED21Q13503 144 aa9.52□□□□□ -0.88
CACNA1C-220ENST00000399655 CEP78Q5JTW2 689 aa9.52□□□□□ -0.88
CACNA1C-220ENST00000399655 RCSD1Q6JBY9 416 aa9.52□□□□□ -0.88
CACNA1C-220ENST00000399655 CFAP36Q96G28 342 aa9.52□□□□□ -0.88
CACNA1C-220ENST00000399655 SLC9A1P19634 815 aa9.52□□□□□ -0.89
CACNA1C-220ENST00000399655 TRPC1P48995 793 aa9.52□□□□□ -0.89
CACNA1C-220ENST00000399655 PPWD1Q96BP3 646 aaKnown RBP9.52□□□□□ -0.89
CACNA1C-220ENST00000399655 SYCE1LA8MT33 242 aa9.52□□□□□ -0.89
CACNA1C-220ENST00000399655 STX10O60499 249 aa9.52□□□□□ -0.89
CACNA1C-220ENST00000399655 HARSP12081 509 aaKnown RBP9.52□□□□□ -0.89
CACNA1C-220ENST00000399655 EFCAB13Q8IY85 973 aa9.52□□□□□ -0.89
CACNA1C-220ENST00000399655 RPGRQ92834 1020 aaKnown RBP9.52□□□□□ -0.89
CACNA1C-220ENST00000399655 CCDC90BQ9GZT6 254 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms