RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 LRP2BPQ9P2M1 347 aa17.26■□□□□ 0.35
HLA-DQB1-202ENST00000399079 GAKO14976 1311 aa17.25■□□□□ 0.35
HLA-DQB1-202ENST00000399079 FAM155AB1AL88 458 aaPredicted RBP17.25■□□□□ 0.35
HLA-DQB1-202ENST00000399079 SMARCA5O60264 1052 aaPredicted RBP17.25■□□□□ 0.35
HLA-DQB1-202ENST00000399079 TNNI2P48788 182 aa17.25■□□□□ 0.35
HLA-DQB1-202ENST00000399079 SUPT20HL1Q3ZLR7 823 aa17.25■□□□□ 0.35
HLA-DQB1-202ENST00000399079 NSUN4Q96CB9 384 aaKnown RBP17.25■□□□□ 0.35
HLA-DQB1-202ENST00000399079 USP40Q9NVE5 1235 aa17.25■□□□□ 0.35
HLA-DQB1-202ENST00000399079 ANGEL1Q9UNK9 670 aaKnown RBP17.25■□□□□ 0.35
HLA-DQB1-202ENST00000399079 SUPT16HQ9Y5B9 1047 aaKnown RBP17.25■□□□□ 0.35
HLA-DQB1-202ENST00000399079 AKAP11Q9UKA4 1901 aa17.24■□□□□ 0.35
HLA-DQB1-202ENST00000399079 IFIT2P09913 472 aaKnown RBP17.24■□□□□ 0.35
HLA-DQB1-202ENST00000399079 NFIAQ12857 509 aa17.24■□□□□ 0.35
HLA-DQB1-202ENST00000399079 LRRCC1Q9C099 1032 aa17.24■□□□□ 0.35
HLA-DQB1-202ENST00000399079 MYH2Q9UKX2 1941 aa17.23■□□□□ 0.35
HLA-DQB1-202ENST00000399079 MROH7-TTC4A0A0A0MT08 1334 aa17.23■□□□□ 0.35
HLA-DQB1-202ENST00000399079 TCP10Q12799 353 aa17.23■□□□□ 0.35
HLA-DQB1-202ENST00000399079 ARMC9Q7Z3E5 817 aa17.23■□□□□ 0.35
HLA-DQB1-202ENST00000399079 FAM163AQ96GL9 167 aaPredicted RBP17.23■□□□□ 0.35
HLA-DQB1-202ENST00000399079 DCTPP1Q9H773 170 aa17.23■□□□□ 0.35
HLA-DQB1-202ENST00000399079 PIH1D3Q9NQM4 214 aaKnown RBP17.23■□□□□ 0.35
HLA-DQB1-202ENST00000399079 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.23■□□□□ 0.35
HLA-DQB1-202ENST00000399079 PPP1R12BO60237 982 aaPredicted RBP17.22■□□□□ 0.35
HLA-DQB1-202ENST00000399079 USP2O75604 605 aaPredicted RBP17.22■□□□□ 0.35
HLA-DQB1-202ENST00000399079 MAP2K2P36507 400 aa17.22■□□□□ 0.35
HLA-DQB1-202ENST00000399079 BTDP43251 543 aa17.22■□□□□ 0.35
HLA-DQB1-202ENST00000399079 NOGQ13253 232 aa17.22■□□□□ 0.35
HLA-DQB1-202ENST00000399079 FKBP1CQ5VVH2 108 aa17.22■□□□□ 0.35
HLA-DQB1-202ENST00000399079 FAM83AQ86UY5 434 aa17.22■□□□□ 0.35
HLA-DQB1-202ENST00000399079 SLF2Q8IX21 1173 aa17.22■□□□□ 0.35
HLA-DQB1-202ENST00000399079 CCDC102AQ96A19 550 aa17.22■□□□□ 0.35
HLA-DQB1-202ENST00000399079 ANTXR1Q9H6X2 564 aa17.22■□□□□ 0.35
HLA-DQB1-202ENST00000399079 WBP1LQ9NX94 342 aa17.22■□□□□ 0.35
HLA-DQB1-202ENST00000399079 SLC10A3P09131 477 aa17.21■□□□□ 0.35
HLA-DQB1-202ENST00000399079 LDLRAD1Q5T700 205 aa17.21■□□□□ 0.35
HLA-DQB1-202ENST00000399079 RASAL3Q86YV0 1011 aa17.21■□□□□ 0.35
HLA-DQB1-202ENST00000399079 FAM198AQ9UFP1 575 aa17.21■□□□□ 0.35
HLA-DQB1-202ENST00000399079 GPR75-ASB3A0A0A6YYF3 556 aa17.21■□□□□ 0.34
HLA-DQB1-202ENST00000399079 MAP2K1Q02750 393 aaPredicted RBP17.21■□□□□ 0.34
HLA-DQB1-202ENST00000399079 MAP3K11Q16584 847 aa17.21■□□□□ 0.34
HLA-DQB1-202ENST00000399079 ZFPM1Q8IX07 1006 aa17.21■□□□□ 0.34
HLA-DQB1-202ENST00000399079 CLMNQ96JQ2 1002 aa17.21■□□□□ 0.34
HLA-DQB1-202ENST00000399079 THSD7BQ9C0I4 1608 aa17.2■□□□□ 0.34
HLA-DQB1-202ENST00000399079 FOXN1O15353 648 aa17.2■□□□□ 0.34
HLA-DQB1-202ENST00000399079 IDH1O75874 414 aaKnown RBP17.2■□□□□ 0.34
HLA-DQB1-202ENST00000399079 GSTO1P78417 241 aa17.2■□□□□ 0.34
HLA-DQB1-202ENST00000399079 KIF23Q02241 960 aaPredicted RBP17.2■□□□□ 0.34
HLA-DQB1-202ENST00000399079 NAA16Q6N069 864 aaPredicted RBP17.2■□□□□ 0.34
HLA-DQB1-202ENST00000399079 ADGRA1Q86SQ6 560 aa17.2■□□□□ 0.34
HLA-DQB1-202ENST00000399079 FAM151AQ8WW52 585 aa17.2■□□□□ 0.34
HLA-DQB1-202ENST00000399079 WDHD1O75717 1129 aaPredicted RBP17.19■□□□□ 0.34
HLA-DQB1-202ENST00000399079 LDHCP07864 332 aa17.19■□□□□ 0.34
HLA-DQB1-202ENST00000399079 RGS3P49796 1198 aa17.19■□□□□ 0.34
HLA-DQB1-202ENST00000399079 RHBDL3P58872 404 aa17.19■□□□□ 0.34
HLA-DQB1-202ENST00000399079 MKRN3Q13064 507 aaKnown RBP17.19■□□□□ 0.34
HLA-DQB1-202ENST00000399079 EXOC6Q8TAG9 804 aa17.19■□□□□ 0.34
HLA-DQB1-202ENST00000399079 DDX4Q9NQI0 724 aaKnown RBP17.19■□□□□ 0.34
HLA-DQB1-202ENST00000399079 MYO5AQ9Y4I1 1855 aaKnown RBP17.19■□□□□ 0.34
HLA-DQB1-202ENST00000399079 IREB2P48200 963 aaKnown RBP17.18■□□□□ 0.34
HLA-DQB1-202ENST00000399079 PICALMQ13492 652 aa17.18■□□□□ 0.34
HLA-DQB1-202ENST00000399079 MIGA2Q7L4E1 593 aa17.18■□□□□ 0.34
HLA-DQB1-202ENST00000399079 EDC3Q96F86 508 aaKnown RBP17.18■□□□□ 0.34
HLA-DQB1-202ENST00000399079 DNAJC2Q99543 621 aaKnown RBP17.18■□□□□ 0.34
HLA-DQB1-202ENST00000399079 IDI2Q9BXS1 227 aa17.18■□□□□ 0.34
HLA-DQB1-202ENST00000399079 AIDAQ96BJ3 306 aa17.17■□□□□ 0.34
HLA-DQB1-202ENST00000399079 SLC10A4Q96EP9 437 aa17.17■□□□□ 0.34
HLA-DQB1-202ENST00000399079 BOLA2Q9H3K6 86 aa17.17■□□□□ 0.34
HLA-DQB1-202ENST00000399079 AATFQ9NY61 560 aaKnown RBP eCLIP17.17■□□□□ 0.34
HLA-DQB1-202ENST00000399079 GOLIM4O00461 696 aa17.16■□□□□ 0.34
HLA-DQB1-202ENST00000399079 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.16■□□□□ 0.34
HLA-DQB1-202ENST00000399079 CSRNP1Q96S65 589 aa17.16■□□□□ 0.34
HLA-DQB1-202ENST00000399079 RFX7Q2KHR2 1363 aa17.16■□□□□ 0.34
HLA-DQB1-202ENST00000399079 RPAP1Q9BWH6 1393 aaPredicted RBP17.16■□□□□ 0.34
HLA-DQB1-202ENST00000399079 ATP5JP18859 108 aa17.16■□□□□ 0.34
HLA-DQB1-202ENST00000399079 CYP7A1P22680 504 aa17.16■□□□□ 0.34
HLA-DQB1-202ENST00000399079 IRX6P78412 446 aaPredicted RBP17.16■□□□□ 0.34
HLA-DQB1-202ENST00000399079 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.16■□□□□ 0.34
HLA-DQB1-202ENST00000399079 SH3BP5LQ7L8J4 393 aa17.16■□□□□ 0.34
HLA-DQB1-202ENST00000399079 ANKRD13AQ8IZ07 590 aa17.16■□□□□ 0.34
HLA-DQB1-202ENST00000399079 MAGEB6Q8N7X4 407 aa17.16■□□□□ 0.34
HLA-DQB1-202ENST00000399079 SH3RF3Q8TEJ3 882 aaPredicted RBP17.16■□□□□ 0.34
HLA-DQB1-202ENST00000399079 BEGAINQ9BUH8 593 aa17.16■□□□□ 0.34
HLA-DQB1-202ENST00000399079 TSKSQ9UJT2 592 aa17.16■□□□□ 0.34
HLA-DQB1-202ENST00000399079 DDTLA6NHG4 134 aaPredicted RBP17.15■□□□□ 0.34
HLA-DQB1-202ENST00000399079 ENTPD3O75355 529 aa17.15■□□□□ 0.34
HLA-DQB1-202ENST00000399079 TSHZ3Q63HK5 1081 aa17.15■□□□□ 0.34
HLA-DQB1-202ENST00000399079 ZSCAN29Q8IWY8 852 aaPredicted RBP17.15■□□□□ 0.34
HLA-DQB1-202ENST00000399079 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.15■□□□□ 0.34
HLA-DQB1-202ENST00000399079 ELP3Q9H9T3 547 aa17.15■□□□□ 0.34
HLA-DQB1-202ENST00000399079 BAG3O95817 575 aa17.14■□□□□ 0.33
HLA-DQB1-202ENST00000399079 SLURP2P0DP57 97 aa17.14■□□□□ 0.33
HLA-DQB1-202ENST00000399079 DYNLL1P63167 89 aaKnown RBP17.14■□□□□ 0.33
HLA-DQB1-202ENST00000399079 MAP3K12Q12852 859 aa17.14■□□□□ 0.33
HLA-DQB1-202ENST00000399079 VGLL4Q14135 290 aa17.14■□□□□ 0.33
HLA-DQB1-202ENST00000399079 SPRYD7Q5W111 196 aa17.14■□□□□ 0.33
HLA-DQB1-202ENST00000399079 TEX11Q8IYF3 940 aa17.14■□□□□ 0.33
HLA-DQB1-202ENST00000399079 MIGA1Q8NAN2 632 aa17.14■□□□□ 0.33
HLA-DQB1-202ENST00000399079 WRNIP1Q96S55 665 aa17.14■□□□□ 0.33
HLA-DQB1-202ENST00000399079 NOL10Q9BSC4 688 aaKnown RBP17.14■□□□□ 0.33
HLA-DQB1-202ENST00000399079 MAST2Q6P0Q8 1798 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms