RNA–Protein interactions for RNA: ENST00000398989.2

TUBA4A-203, Transcript of tubulin alpha 4a, humanhuman

TSL 3

Gene TUBA4A, Length 615 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA4A-203ENST00000398989 CDAN1Q8IWY9 1227 aa17.11■□□□□ 0.33
TUBA4A-203ENST00000398989 KIF1BPQ96EK5 621 aa17.11■□□□□ 0.33
TUBA4A-203ENST00000398989 TEPSINQ96N21 525 aa17.11■□□□□ 0.33
TUBA4A-203ENST00000398989 ZIC5Q96T25 663 aa17.11■□□□□ 0.33
TUBA4A-203ENST00000398989 BCL11AQ9H165 835 aa17.11■□□□□ 0.33
TUBA4A-203ENST00000398989 OTOFQ9HC10 1997 aa17.11■□□□□ 0.33
TUBA4A-203ENST00000398989 FOXN1O15353 648 aa17.1■□□□□ 0.33
TUBA4A-203ENST00000398989 PPP1R12BO60237 982 aaPredicted RBP17.1■□□□□ 0.33
TUBA4A-203ENST00000398989 MECOMQ03112 1051 aa17.1■□□□□ 0.33
TUBA4A-203ENST00000398989 FKBP1CQ5VVH2 108 aa17.1■□□□□ 0.33
TUBA4A-203ENST00000398989 CDC42EP5Q6NZY7 148 aa17.1■□□□□ 0.33
TUBA4A-203ENST00000398989 SLF2Q8IX21 1173 aa17.1■□□□□ 0.33
TUBA4A-203ENST00000398989 ZNF512BQ96KM6 892 aaPredicted RBP17.1■□□□□ 0.33
TUBA4A-203ENST00000398989 BEGAINQ9BUH8 593 aa17.1■□□□□ 0.33
TUBA4A-203ENST00000398989 RAI14Q9P0K7 980 aa17.1■□□□□ 0.33
TUBA4A-203ENST00000398989 RAB11FIP3O75154 756 aa17.09■□□□□ 0.33
TUBA4A-203ENST00000398989 FAM83AQ86UY5 434 aa17.09■□□□□ 0.33
TUBA4A-203ENST00000398989 CLASRPQ8N2M8 674 aaKnown RBP17.09■□□□□ 0.33
TUBA4A-203ENST00000398989 USP40Q9NVE5 1235 aa17.09■□□□□ 0.33
TUBA4A-203ENST00000398989 LRP2BPQ9P2M1 347 aa17.09■□□□□ 0.33
TUBA4A-203ENST00000398989 GAKO14976 1311 aa17.09■□□□□ 0.33
TUBA4A-203ENST00000398989 MROH7-TTC4A0A0A0MT08 1334 aa17.08■□□□□ 0.32
TUBA4A-203ENST00000398989 MAP3K11Q16584 847 aa17.08■□□□□ 0.32
TUBA4A-203ENST00000398989 LDLRAD1Q5T700 205 aa17.08■□□□□ 0.32
TUBA4A-203ENST00000398989 ZNF384Q8TF68 577 aa17.08■□□□□ 0.32
TUBA4A-203ENST00000398989 NSUN4Q96CB9 384 aaKnown RBP17.08■□□□□ 0.32
TUBA4A-203ENST00000398989 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.08■□□□□ 0.32
TUBA4A-203ENST00000398989 CYP2E1P05181 493 aaPredicted RBP17.07■□□□□ 0.32
TUBA4A-203ENST00000398989 IFIT2P09913 472 aaKnown RBP17.07■□□□□ 0.32
TUBA4A-203ENST00000398989 BTDP43251 543 aa17.07■□□□□ 0.32
TUBA4A-203ENST00000398989 ZAP70P43403 619 aa17.07■□□□□ 0.32
TUBA4A-203ENST00000398989 IREB2P48200 963 aaKnown RBP17.07■□□□□ 0.32
TUBA4A-203ENST00000398989 GSTO1P78417 241 aa17.07■□□□□ 0.32
TUBA4A-203ENST00000398989 KIF23Q02241 960 aaPredicted RBP17.07■□□□□ 0.32
TUBA4A-203ENST00000398989 TCP10Q12799 353 aa17.07■□□□□ 0.32
TUBA4A-203ENST00000398989 NFIAQ12857 509 aa17.07■□□□□ 0.32
TUBA4A-203ENST00000398989 FAM163AQ96GL9 167 aaPredicted RBP17.07■□□□□ 0.32
TUBA4A-203ENST00000398989 CRBNQ96SW2 442 aa17.07■□□□□ 0.32
TUBA4A-203ENST00000398989 RPAP1Q9BWH6 1393 aaPredicted RBP17.06■□□□□ 0.32
TUBA4A-203ENST00000398989 DOCK2Q92608 1830 aa17.06■□□□□ 0.32
TUBA4A-203ENST00000398989 USP2O75604 605 aaPredicted RBP17.06■□□□□ 0.32
TUBA4A-203ENST00000398989 CTCFP49711 727 aaPredicted RBP17.06■□□□□ 0.32
TUBA4A-203ENST00000398989 FAM151AQ8WW52 585 aa17.06■□□□□ 0.32
TUBA4A-203ENST00000398989 CLMNQ96JQ2 1002 aa17.06■□□□□ 0.32
TUBA4A-203ENST00000398989 NDUFB9Q9Y6M9 179 aa17.06■□□□□ 0.32
TUBA4A-203ENST00000398989 GPR75-ASB3A0A0A6YYF3 556 aa17.05■□□□□ 0.32
TUBA4A-203ENST00000398989 LDHCP07864 332 aa17.05■□□□□ 0.32
TUBA4A-203ENST00000398989 MKRN3Q13064 507 aaKnown RBP17.05■□□□□ 0.32
TUBA4A-203ENST00000398989 SLC10A4Q96EP9 437 aa17.05■□□□□ 0.32
TUBA4A-203ENST00000398989 LRRCC1Q9C099 1032 aa17.05■□□□□ 0.32
TUBA4A-203ENST00000398989 PIH1D3Q9NQM4 214 aaKnown RBP17.05■□□□□ 0.32
TUBA4A-203ENST00000398989 FAM198AQ9UFP1 575 aa17.05■□□□□ 0.32
TUBA4A-203ENST00000398989 PCDHB15Q9Y5E8 787 aa17.05■□□□□ 0.32
TUBA4A-203ENST00000398989 RGS3P49796 1198 aa17.04■□□□□ 0.32
TUBA4A-203ENST00000398989 NAA16Q6N069 864 aaPredicted RBP17.04■□□□□ 0.32
TUBA4A-203ENST00000398989 ANKRD13AQ8IZ07 590 aa17.04■□□□□ 0.32
TUBA4A-203ENST00000398989 HOOK2Q96ED9 719 aa17.04■□□□□ 0.32
TUBA4A-203ENST00000398989 TSKSQ9UJT2 592 aa17.04■□□□□ 0.32
TUBA4A-203ENST00000398989 RFX7Q2KHR2 1363 aa17.03■□□□□ 0.32
TUBA4A-203ENST00000398989 UNCXA6NJT0 531 aa17.03■□□□□ 0.32
TUBA4A-203ENST00000398989 CA12O43570 354 aa17.03■□□□□ 0.32
TUBA4A-203ENST00000398989 SMARCA5O60264 1052 aaPredicted RBP17.03■□□□□ 0.32
TUBA4A-203ENST00000398989 HSPA8P11142 646 aaKnown RBP17.03■□□□□ 0.32
TUBA4A-203ENST00000398989 LBX1P52954 281 aa17.03■□□□□ 0.32
TUBA4A-203ENST00000398989 COL13A1Q5TAT6 717 aaPredicted RBP17.03■□□□□ 0.32
TUBA4A-203ENST00000398989 CSRNP1Q96S65 589 aa17.03■□□□□ 0.32
TUBA4A-203ENST00000398989 IDI2Q9BXS1 227 aa17.03■□□□□ 0.32
TUBA4A-203ENST00000398989 CDK5RAP2Q96SN8 1893 aa17.03■□□□□ 0.32
TUBA4A-203ENST00000398989 LAMB1P07942 1786 aa17.02■□□□□ 0.32
TUBA4A-203ENST00000398989 WDHD1O75717 1129 aaPredicted RBP17.02■□□□□ 0.32
TUBA4A-203ENST00000398989 IDH1O75874 414 aaKnown RBP17.02■□□□□ 0.32
TUBA4A-203ENST00000398989 RHBDL3P58872 404 aa17.02■□□□□ 0.32
TUBA4A-203ENST00000398989 PICALMQ13492 652 aa17.02■□□□□ 0.32
TUBA4A-203ENST00000398989 SPRYD7Q5W111 196 aa17.02■□□□□ 0.32
TUBA4A-203ENST00000398989 DCAF15Q66K64 600 aa17.02■□□□□ 0.32
TUBA4A-203ENST00000398989 MIGA2Q7L4E1 593 aa17.02■□□□□ 0.32
TUBA4A-203ENST00000398989 ZFPM1Q8IX07 1006 aa17.02■□□□□ 0.32
TUBA4A-203ENST00000398989 NOL10Q9BSC4 688 aaKnown RBP17.02■□□□□ 0.32
TUBA4A-203ENST00000398989 ANTXR1Q9H6X2 564 aa17.02■□□□□ 0.32
TUBA4A-203ENST00000398989 DCTPP1Q9H773 170 aa17.02■□□□□ 0.32
TUBA4A-203ENST00000398989 ENTPD3O75355 529 aa17.01■□□□□ 0.31
TUBA4A-203ENST00000398989 MAP3K9P80192 1104 aa17.01■□□□□ 0.31
TUBA4A-203ENST00000398989 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.01■□□□□ 0.31
TUBA4A-203ENST00000398989 ADGRA1Q86SQ6 560 aa17.01■□□□□ 0.31
TUBA4A-203ENST00000398989 REM2Q8IYK8 340 aaPredicted RBP17.01■□□□□ 0.31
TUBA4A-203ENST00000398989 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.01■□□□□ 0.31
TUBA4A-203ENST00000398989 WNK4Q96J92 1243 aa17.01■□□□□ 0.31
TUBA4A-203ENST00000398989 ELP3Q9H9T3 547 aa17.01■□□□□ 0.31
TUBA4A-203ENST00000398989 DDX4Q9NQI0 724 aaKnown RBP17.01■□□□□ 0.31
TUBA4A-203ENST00000398989 FOCADQ5VW36 1801 aa17■□□□□ 0.31
TUBA4A-203ENST00000398989 IGSF3O75054 1194 aa17■□□□□ 0.31
TUBA4A-203ENST00000398989 VGLL4Q14135 290 aa17■□□□□ 0.31
TUBA4A-203ENST00000398989 ZSCAN29Q8IWY8 852 aaPredicted RBP17■□□□□ 0.31
TUBA4A-203ENST00000398989 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17■□□□□ 0.31
TUBA4A-203ENST00000398989 WRNIP1Q96S55 665 aa17■□□□□ 0.31
TUBA4A-203ENST00000398989 DNAJC2Q99543 621 aaKnown RBP17■□□□□ 0.31
TUBA4A-203ENST00000398989 AATFQ9NY61 560 aaKnown RBP eCLIP17■□□□□ 0.31
TUBA4A-203ENST00000398989 CSADQ9Y600 493 aa17■□□□□ 0.31
TUBA4A-203ENST00000398989 TRPA1O75762 1119 aa16.99■□□□□ 0.31
TUBA4A-203ENST00000398989 BAG3O95817 575 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms