RNA–Protein interactions for RNA: ENST00000398975.6

COL13A1-204, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5

Gene COL13A1, Length 1,057 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-204ENST00000398975 FAM163AQ96GL9 167 aaPredicted RBP17.75■□□□□ 0.43
COL13A1-204ENST00000398975 PIH1D3Q9NQM4 214 aaKnown RBP17.75■□□□□ 0.43
COL13A1-204ENST00000398975 ANGEL1Q9UNK9 670 aaKnown RBP17.75■□□□□ 0.43
COL13A1-204ENST00000398975 RFX7Q2KHR2 1363 aa17.75■□□□□ 0.43
COL13A1-204ENST00000398975 MAST2Q6P0Q8 1798 aa17.74■□□□□ 0.43
COL13A1-204ENST00000398975 FOXN1O15353 648 aa17.74■□□□□ 0.43
COL13A1-204ENST00000398975 NF2P35240 595 aa17.74■□□□□ 0.43
COL13A1-204ENST00000398975 MAP2K2P36507 400 aa17.74■□□□□ 0.43
COL13A1-204ENST00000398975 TNFAIP1Q13829 316 aa17.74■□□□□ 0.43
COL13A1-204ENST00000398975 TTLL12Q14166 644 aaPredicted RBP17.74■□□□□ 0.43
COL13A1-204ENST00000398975 FKBP1CQ5VVH2 108 aa17.74■□□□□ 0.43
COL13A1-204ENST00000398975 ERICH6Q7L0X2 663 aa17.74■□□□□ 0.43
COL13A1-204ENST00000398975 DZIP1Q86YF9 867 aaKnown RBP17.74■□□□□ 0.43
COL13A1-204ENST00000398975 ZFPM1Q8IX07 1006 aa17.74■□□□□ 0.43
COL13A1-204ENST00000398975 NSUN4Q96CB9 384 aaKnown RBP17.74■□□□□ 0.43
COL13A1-204ENST00000398975 FAM198AQ9UFP1 575 aa17.74■□□□□ 0.43
COL13A1-204ENST00000398975 MROH7-TTC4A0A0A0MT08 1334 aa17.73■□□□□ 0.43
COL13A1-204ENST00000398975 SMARCA5O60264 1052 aaPredicted RBP17.73■□□□□ 0.43
COL13A1-204ENST00000398975 RAB11FIP3O75154 756 aa17.73■□□□□ 0.43
COL13A1-204ENST00000398975 USP2O75604 605 aaPredicted RBP17.73■□□□□ 0.43
COL13A1-204ENST00000398975 MAP3K11Q16584 847 aa17.73■□□□□ 0.43
COL13A1-204ENST00000398975 SPTY2D1Q68D10 685 aaPredicted RBP17.73■□□□□ 0.43
COL13A1-204ENST00000398975 CLMNQ96JQ2 1002 aa17.73■□□□□ 0.43
COL13A1-204ENST00000398975 USP40Q9NVE5 1235 aa17.73■□□□□ 0.43
COL13A1-204ENST00000398975 DOCK2Q92608 1830 aa17.72■□□□□ 0.43
COL13A1-204ENST00000398975 NOGQ13253 232 aa17.72■□□□□ 0.43
COL13A1-204ENST00000398975 SUPT20HL1Q3ZLR7 823 aa17.72■□□□□ 0.43
COL13A1-204ENST00000398975 FAM83AQ86UY5 434 aa17.72■□□□□ 0.43
COL13A1-204ENST00000398975 CCDC102AQ96A19 550 aa17.72■□□□□ 0.43
COL13A1-204ENST00000398975 BCL11AQ9H165 835 aa17.72■□□□□ 0.43
COL13A1-204ENST00000398975 ANTXR1Q9H6X2 564 aa17.72■□□□□ 0.43
COL13A1-204ENST00000398975 DCTPP1Q9H773 170 aa17.72■□□□□ 0.43
COL13A1-204ENST00000398975 RAI14Q9P0K7 980 aa17.72■□□□□ 0.43
COL13A1-204ENST00000398975 GPR75-ASB3A0A0A6YYF3 556 aa17.71■□□□□ 0.43
COL13A1-204ENST00000398975 BTDP43251 543 aa17.71■□□□□ 0.43
COL13A1-204ENST00000398975 TNNI2P48788 182 aa17.71■□□□□ 0.43
COL13A1-204ENST00000398975 RHBDL3P58872 404 aa17.71■□□□□ 0.43
COL13A1-204ENST00000398975 KIF23Q02241 960 aaPredicted RBP17.71■□□□□ 0.43
COL13A1-204ENST00000398975 TCP10Q12799 353 aa17.71■□□□□ 0.43
COL13A1-204ENST00000398975 ARMC9Q7Z3E5 817 aa17.71■□□□□ 0.43
COL13A1-204ENST00000398975 ADGRA1Q86SQ6 560 aa17.71■□□□□ 0.43
COL13A1-204ENST00000398975 CLASRPQ8N2M8 674 aaKnown RBP17.71■□□□□ 0.43
COL13A1-204ENST00000398975 RPAP1Q9BWH6 1393 aaPredicted RBP17.7■□□□□ 0.42
COL13A1-204ENST00000398975 WDHD1O75717 1129 aaPredicted RBP17.7■□□□□ 0.42
COL13A1-204ENST00000398975 DDX4Q9NQI0 724 aaKnown RBP17.7■□□□□ 0.42
COL13A1-204ENST00000398975 TMOD2Q9NZR1 351 aa17.7■□□□□ 0.42
COL13A1-204ENST00000398975 LRP2BPQ9P2M1 347 aa17.7■□□□□ 0.42
COL13A1-204ENST00000398975 CDK5RAP2Q96SN8 1893 aa17.69■□□□□ 0.42
COL13A1-204ENST00000398975 MAP2K1Q02750 393 aaPredicted RBP17.69■□□□□ 0.42
COL13A1-204ENST00000398975 SH3BP5LQ7L8J4 393 aa17.69■□□□□ 0.42
COL13A1-204ENST00000398975 FAM151AQ8WW52 585 aa17.69■□□□□ 0.42
COL13A1-204ENST00000398975 IDI2Q9BXS1 227 aa17.69■□□□□ 0.42
COL13A1-204ENST00000398975 PPP1R12BO60237 982 aaPredicted RBP17.68■□□□□ 0.42
COL13A1-204ENST00000398975 IFIT2P09913 472 aaKnown RBP17.68■□□□□ 0.42
COL13A1-204ENST00000398975 SLURP2P0DP57 97 aa17.68■□□□□ 0.42
COL13A1-204ENST00000398975 HSPA8P11142 646 aaKnown RBP17.68■□□□□ 0.42
COL13A1-204ENST00000398975 GJA5P36382 358 aa17.68■□□□□ 0.42
COL13A1-204ENST00000398975 RGS3P49796 1198 aa17.68■□□□□ 0.42
COL13A1-204ENST00000398975 MKRN3Q13064 507 aaKnown RBP17.68■□□□□ 0.42
COL13A1-204ENST00000398975 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.68■□□□□ 0.42
COL13A1-204ENST00000398975 EDC3Q96F86 508 aaKnown RBP17.68■□□□□ 0.42
COL13A1-204ENST00000398975 CSRNP1Q96S65 589 aa17.68■□□□□ 0.42
COL13A1-204ENST00000398975 LRRCC1Q9C099 1032 aa17.68■□□□□ 0.42
COL13A1-204ENST00000398975 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.68■□□□□ 0.42
COL13A1-204ENST00000398975 TSKSQ9UJT2 592 aa17.68■□□□□ 0.42
COL13A1-204ENST00000398975 SUPT16HQ9Y5B9 1047 aaKnown RBP17.68■□□□□ 0.42
COL13A1-204ENST00000398975 LAMB1P07942 1786 aa17.68■□□□□ 0.42
COL13A1-204ENST00000398975 ATRNL1Q5VV63 1379 aa17.67■□□□□ 0.42
COL13A1-204ENST00000398975 AK9Q5TCS8 1911 aa17.67■□□□□ 0.42
COL13A1-204ENST00000398975 GSTO1P78417 241 aa17.67■□□□□ 0.42
COL13A1-204ENST00000398975 COL13A1Q5TAT6 717 aaPredicted RBP17.67■□□□□ 0.42
COL13A1-204ENST00000398975 SLF2Q8IX21 1173 aa17.67■□□□□ 0.42
COL13A1-204ENST00000398975 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.67■□□□□ 0.42
COL13A1-204ENST00000398975 LDHCP07864 332 aa17.66■□□□□ 0.42
COL13A1-204ENST00000398975 SPRYD7Q5W111 196 aa17.66■□□□□ 0.42
COL13A1-204ENST00000398975 NAA16Q6N069 864 aaPredicted RBP17.66■□□□□ 0.42
COL13A1-204ENST00000398975 MIGA2Q7L4E1 593 aa17.66■□□□□ 0.42
COL13A1-204ENST00000398975 EXOC6Q8TAG9 804 aa17.66■□□□□ 0.42
COL13A1-204ENST00000398975 SH3RF3Q8TEJ3 882 aaPredicted RBP17.66■□□□□ 0.42
COL13A1-204ENST00000398975 CNKSR2Q8WXI2 1034 aa17.66■□□□□ 0.42
COL13A1-204ENST00000398975 DDTLA6NHG4 134 aaPredicted RBP17.65■□□□□ 0.42
COL13A1-204ENST00000398975 ENTPD3O75355 529 aa17.65■□□□□ 0.42
COL13A1-204ENST00000398975 IDH1O75874 414 aaKnown RBP17.65■□□□□ 0.42
COL13A1-204ENST00000398975 IREB2P48200 963 aaKnown RBP17.65■□□□□ 0.42
COL13A1-204ENST00000398975 LBX1P52954 281 aa17.65■□□□□ 0.42
COL13A1-204ENST00000398975 PICALMQ13492 652 aa17.65■□□□□ 0.42
COL13A1-204ENST00000398975 VGLL4Q14135 290 aa17.65■□□□□ 0.42
COL13A1-204ENST00000398975 AIDAQ96BJ3 306 aa17.65■□□□□ 0.42
COL13A1-204ENST00000398975 SLC10A4Q96EP9 437 aa17.65■□□□□ 0.42
COL13A1-204ENST00000398975 WNK4Q96J92 1243 aa17.65■□□□□ 0.42
COL13A1-204ENST00000398975 FOCADQ5VW36 1801 aa17.65■□□□□ 0.42
COL13A1-204ENST00000398975 SIPA1L1O43166 1804 aa17.64■□□□□ 0.41
COL13A1-204ENST00000398975 ATP5JP18859 108 aa17.64■□□□□ 0.41
COL13A1-204ENST00000398975 CTCFP49711 727 aaPredicted RBP17.64■□□□□ 0.41
COL13A1-204ENST00000398975 ANKRD13AQ8IZ07 590 aa17.64■□□□□ 0.41
COL13A1-204ENST00000398975 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.64■□□□□ 0.41
COL13A1-204ENST00000398975 BOLA2Q9H3K6 86 aa17.64■□□□□ 0.41
COL13A1-204ENST00000398975 ELP3Q9H9T3 547 aa17.64■□□□□ 0.41
COL13A1-204ENST00000398975 AATFQ9NY61 560 aaKnown RBP eCLIP17.64■□□□□ 0.41
COL13A1-204ENST00000398975 UNCXA6NJT0 531 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms