RNA–Protein interactions for RNA: ENST00000396551.7

TRIM39-205, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-205ENST00000396551 KIAA2012Q0VF49 1180 aa19.32■□□□□ 0.68
TRIM39-205ENST00000396551 MYSM1Q5VVJ2 828 aa19.32■□□□□ 0.68
TRIM39-205ENST00000396551 TDRD7Q8NHU6 1098 aaKnown RBP19.32■□□□□ 0.68
TRIM39-205ENST00000396551 FAM160A1Q05DH4 1040 aa19.31■□□□□ 0.68
TRIM39-205ENST00000396551 CCDC73Q6ZRK6 1079 aa19.31■□□□□ 0.68
TRIM39-205ENST00000396551 PDE4CQ08493 712 aa19.31■□□□□ 0.68
TRIM39-205ENST00000396551 FAM98CQ17RN3 349 aaKnown RBP19.31■□□□□ 0.68
TRIM39-205ENST00000396551 CLEC4GQ6UXB4 293 aa19.31■□□□□ 0.68
TRIM39-205ENST00000396551 SMIM5Q71RC9 77 aa19.31■□□□□ 0.68
TRIM39-205ENST00000396551 FAM217BQ9NTX9 383 aaPredicted RBP19.31■□□□□ 0.68
TRIM39-205ENST00000396551 ZSWIM5Q9P217 1185 aa19.31■□□□□ 0.68
TRIM39-205ENST00000396551 IQSEC3Q9UPP2 1182 aaPredicted RBP19.31■□□□□ 0.68
TRIM39-205ENST00000396551 SCN7AQ01118 1682 aa19.31■□□□□ 0.68
TRIM39-205ENST00000396551 BRAPQ7Z569 592 aa19.3■□□□□ 0.68
TRIM39-205ENST00000396551 SGMS1Q86VZ5 419 aa19.3■□□□□ 0.68
TRIM39-205ENST00000396551 MICU3Q86XE3 530 aa19.3■□□□□ 0.68
TRIM39-205ENST00000396551 PNPLA7Q6ZV29 1317 aa19.3■□□□□ 0.68
TRIM39-205ENST00000396551 COL1A1P02452 1464 aaPredicted RBP19.3■□□□□ 0.68
TRIM39-205ENST00000396551 ZNF165P49910 485 aa19.3■□□□□ 0.68
TRIM39-205ENST00000396551 NTRK3Q16288 839 aa19.3■□□□□ 0.68
TRIM39-205ENST00000396551 CCDC144CPQ8IYA2 1237 aa19.3■□□□□ 0.68
TRIM39-205ENST00000396551 MYL10Q9BUA6 226 aa19.3■□□□□ 0.68
TRIM39-205ENST00000396551 POLR3EQ9NVU0 708 aa19.3■□□□□ 0.68
TRIM39-205ENST00000396551 TMEM67Q5HYA8 995 aa19.3■□□□□ 0.68
TRIM39-205ENST00000396551 ADALQ6DHV7 355 aa19.3■□□□□ 0.68
TRIM39-205ENST00000396551 SPC24Q8NBT2 197 aa19.3■□□□□ 0.68
TRIM39-205ENST00000396551 PHKBQ93100 1093 aa19.3■□□□□ 0.68
TRIM39-205ENST00000396551 CDC5LQ99459 802 aaKnown RBP19.3■□□□□ 0.68
TRIM39-205ENST00000396551 ZNF804BA4D1E1 1349 aa19.3■□□□□ 0.68
TRIM39-205ENST00000396551 CTAGE5O15320 804 aa19.29■□□□□ 0.68
TRIM39-205ENST00000396551 AKNAD1Q5T1N1 836 aa19.29■□□□□ 0.68
TRIM39-205ENST00000396551 C11orf57Q6ZUT1 292 aaPredicted RBP19.29■□□□□ 0.68
TRIM39-205ENST00000396551 PTF1AQ7RTS3 328 aa19.29■□□□□ 0.68
TRIM39-205ENST00000396551 FMR1NBQ8N0W7 255 aaPredicted RBP19.29■□□□□ 0.68
TRIM39-205ENST00000396551 MIGA1Q8NAN2 632 aa19.29■□□□□ 0.68
TRIM39-205ENST00000396551 ALG1Q9BT22 464 aa19.29■□□□□ 0.68
TRIM39-205ENST00000396551 KCNF1Q9H3M0 494 aa19.29■□□□□ 0.68
TRIM39-205ENST00000396551 R3HCC1Q9Y3T6 440 aaKnown RBP19.29■□□□□ 0.68
TRIM39-205ENST00000396551 SLC4A4Q9Y6R1 1079 aa19.29■□□□□ 0.68
TRIM39-205ENST00000396551 ZBTB43O43298 467 aa19.29■□□□□ 0.68
TRIM39-205ENST00000396551 RANBP6O60518 1105 aaKnown RBP19.29■□□□□ 0.68
TRIM39-205ENST00000396551 PIP4K2BP78356 416 aa19.29■□□□□ 0.68
TRIM39-205ENST00000396551 ADGRA1Q86SQ6 560 aa19.29■□□□□ 0.68
TRIM39-205ENST00000396551 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.29■□□□□ 0.68
TRIM39-205ENST00000396551 YEATS4O95619 227 aa19.29■□□□□ 0.68
TRIM39-205ENST00000396551 STK38Q15208 465 aa19.29■□□□□ 0.68
TRIM39-205ENST00000396551 SF3B3Q15393 1217 aaKnown RBP19.29■□□□□ 0.68
TRIM39-205ENST00000396551 PIBF1Q8WXW3 757 aa19.29■□□□□ 0.68
TRIM39-205ENST00000396551 MRPS27Q92552 414 aaKnown RBP19.29■□□□□ 0.68
TRIM39-205ENST00000396551 KINO60870 393 aaKnown RBP19.28■□□□□ 0.68
TRIM39-205ENST00000396551 LIFRP42702 1097 aa19.28■□□□□ 0.68
TRIM39-205ENST00000396551 GYG1P46976 350 aa19.28■□□□□ 0.68
TRIM39-205ENST00000396551 LRP2BPQ9P2M1 347 aa19.28■□□□□ 0.68
TRIM39-205ENST00000396551 CACNA1SQ13698 1873 aa19.28■□□□□ 0.68
TRIM39-205ENST00000396551 A0A1B0GVL5 298 aa19.28■□□□□ 0.68
TRIM39-205ENST00000396551 A0A1W2PQ27 194 aa19.28■□□□□ 0.68
TRIM39-205ENST00000396551 A0A1W2PQ64 194 aa19.28■□□□□ 0.68
TRIM39-205ENST00000396551 A0A1W2PQD8 194 aa19.28■□□□□ 0.68
TRIM39-205ENST00000396551 IQCB1Q15051 598 aa19.28■□□□□ 0.68
TRIM39-205ENST00000396551 NFXL1Q6ZNB6 911 aa19.28■□□□□ 0.68
TRIM39-205ENST00000396551 RGS22Q8NE09 1264 aa19.28■□□□□ 0.68
TRIM39-205ENST00000396551 BCL2L12Q9HB09 334 aa19.28■□□□□ 0.68
TRIM39-205ENST00000396551 A0A087WWV3 80 aa19.27■□□□□ 0.68
TRIM39-205ENST00000396551 GOLGA8AA7E2F4 631 aa19.27■□□□□ 0.68
TRIM39-205ENST00000396551 GNAT2P19087 354 aa19.27■□□□□ 0.68
TRIM39-205ENST00000396551 ANKRD18AQ8IVF6 992 aa19.27■□□□□ 0.68
TRIM39-205ENST00000396551 C17orf53Q8N3J3 647 aaPredicted RBP19.27■□□□□ 0.68
TRIM39-205ENST00000396551 IFIT3O14879 490 aaKnown RBP19.27■□□□□ 0.68
TRIM39-205ENST00000396551 CDKL5O76039 1030 aa19.27■□□□□ 0.68
TRIM39-205ENST00000396551 TDO2P48775 406 aa19.27■□□□□ 0.68
TRIM39-205ENST00000396551 KRT40Q6A162 431 aa19.27■□□□□ 0.68
TRIM39-205ENST00000396551 KCNG4Q8TDN1 519 aa19.27■□□□□ 0.68
TRIM39-205ENST00000396551 STAG1Q8WVM7 1258 aa19.27■□□□□ 0.68
TRIM39-205ENST00000396551 UBE2Q2LH0YL09 131 aa19.27■□□□□ 0.67
TRIM39-205ENST00000396551 SPTLC2O15270 562 aa19.27■□□□□ 0.67
TRIM39-205ENST00000396551 NDUFA8P51970 172 aa19.27■□□□□ 0.67
TRIM39-205ENST00000396551 PLA2G4DQ86XP0 818 aa19.27■□□□□ 0.67
TRIM39-205ENST00000396551 CNNM2Q9H8M5 875 aa19.27■□□□□ 0.67
TRIM39-205ENST00000396551 TPM2P07951 284 aa19.26■□□□□ 0.67
TRIM39-205ENST00000396551 TBC1D9BQ66K14 1250 aa19.26■□□□□ 0.67
TRIM39-205ENST00000396551 BICDL1Q6ZP65 573 aa19.26■□□□□ 0.67
TRIM39-205ENST00000396551 MFSD6Q6ZSS7 791 aa19.26■□□□□ 0.67
TRIM39-205ENST00000396551 ERCC4Q92889 916 aaPredicted RBP19.26■□□□□ 0.67
TRIM39-205ENST00000396551 CYP7A1P22680 504 aa19.26■□□□□ 0.67
TRIM39-205ENST00000396551 STX1AQ16623 288 aa19.26■□□□□ 0.67
TRIM39-205ENST00000396551 ANO1Q5XXA6 986 aa19.26■□□□□ 0.67
TRIM39-205ENST00000396551 KRT23Q9C075 422 aa19.26■□□□□ 0.67
TRIM39-205ENST00000396551 BSDC1Q9NW68 430 aaPredicted RBP19.26■□□□□ 0.67
TRIM39-205ENST00000396551 CNTNAP4Q9C0A0 1308 aa19.25■□□□□ 0.67
TRIM39-205ENST00000396551 ZNF75DP51815 510 aa19.25■□□□□ 0.67
TRIM39-205ENST00000396551 SF3A1Q15459 793 aaKnown RBP19.25■□□□□ 0.67
TRIM39-205ENST00000396551 VPS37DQ86XT2 251 aa19.25■□□□□ 0.67
TRIM39-205ENST00000396551 CAVIN2O95810 425 aa19.25■□□□□ 0.67
TRIM39-205ENST00000396551 TERF1P54274 439 aa19.25■□□□□ 0.67
TRIM39-205ENST00000396551 RRP12Q5JTH9 1297 aaKnown RBP19.25■□□□□ 0.67
TRIM39-205ENST00000396551 STK11IPQ8N1F8 1099 aa19.25■□□□□ 0.67
TRIM39-205ENST00000396551 CELF1Q92879 486 aaKnown RBP19.25■□□□□ 0.67
TRIM39-205ENST00000396551 ZKSCAN3Q9BRR0 538 aa19.25■□□□□ 0.67
TRIM39-205ENST00000396551 NACAP1Q9BZK3 213 aa19.25■□□□□ 0.67
TRIM39-205ENST00000396551 MINPP1Q9UNW1 487 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms