RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 SLC5A1P13866 664 aa21.91■■□□□ 1.1
EXOSC3-202ENST00000396521 ANKRD23Q86SG2 305 aa21.91■■□□□ 1.1
EXOSC3-202ENST00000396521 MRPL50Q8N5N7 158 aaKnown RBP21.91■■□□□ 1.1
EXOSC3-202ENST00000396521 ARAP2Q8WZ64 1704 aa21.91■■□□□ 1.1
EXOSC3-202ENST00000396521 BRCA2P51587 3418 aa21.9■■□□□ 1.1
EXOSC3-202ENST00000396521 EYA2O00167 538 aa21.9■■□□□ 1.1
EXOSC3-202ENST00000396521 ZEB1P37275 1124 aaPredicted RBP21.9■■□□□ 1.1
EXOSC3-202ENST00000396521 C17orf99Q6UX52 265 aa21.9■■□□□ 1.1
EXOSC3-202ENST00000396521 USP44Q9H0E7 712 aa21.9■■□□□ 1.1
EXOSC3-202ENST00000396521 GNL3LQ9NVN8 582 aaKnown RBP21.9■■□□□ 1.1
EXOSC3-202ENST00000396521 ZNF112Q9UJU3 913 aa21.9■■□□□ 1.1
EXOSC3-202ENST00000396521 OTOFQ9HC10 1997 aa21.9■■□□□ 1.1
EXOSC3-202ENST00000396521 NKX2-3Q8TAU0 364 aa21.89■■□□□ 1.09
EXOSC3-202ENST00000396521 KCNH4Q9UQ05 1017 aa21.89■■□□□ 1.09
EXOSC3-202ENST00000396521 HDAC5Q9UQL6 1122 aa21.89■■□□□ 1.09
EXOSC3-202ENST00000396521 FAM9BQ8IZU0 186 aa21.88■■□□□ 1.09
EXOSC3-202ENST00000396521 ZNF521Q96K83 1311 aa21.87■■□□□ 1.09
EXOSC3-202ENST00000396521 ZBTB22O15209 634 aa21.87■■□□□ 1.09
EXOSC3-202ENST00000396521 NOL9Q5SY16 702 aaKnown RBP21.87■■□□□ 1.09
EXOSC3-202ENST00000396521 MIGA2Q7L4E1 593 aa21.87■■□□□ 1.09
EXOSC3-202ENST00000396521 SRRDQ9UH36 339 aa21.87■■□□□ 1.09
EXOSC3-202ENST00000396521 E9PSI1 815 aa21.86■■□□□ 1.09
EXOSC3-202ENST00000396521 SEMA3EO15041 775 aa21.86■■□□□ 1.09
EXOSC3-202ENST00000396521 CAPN2P17655 700 aa21.86■■□□□ 1.09
EXOSC3-202ENST00000396521 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.86■■□□□ 1.09
EXOSC3-202ENST00000396521 SH3TC2Q8TF17 1288 aa21.86■■□□□ 1.09
EXOSC3-202ENST00000396521 PDHXO00330 501 aa21.85■■□□□ 1.09
EXOSC3-202ENST00000396521 CXCL11O14625 94 aa21.85■■□□□ 1.09
EXOSC3-202ENST00000396521 CIAO1O76071 339 aa21.85■■□□□ 1.09
EXOSC3-202ENST00000396521 INPP5BP32019 993 aa21.85■■□□□ 1.09
EXOSC3-202ENST00000396521 PSMC4P43686 418 aa21.85■■□□□ 1.09
EXOSC3-202ENST00000396521 KLHDC4Q8TBB5 520 aa21.85■■□□□ 1.09
EXOSC3-202ENST00000396521 PARK7Q99497 189 aaKnown RBP21.85■■□□□ 1.09
EXOSC3-202ENST00000396521 ARHGAP39Q9C0H5 1083 aa21.85■■□□□ 1.09
EXOSC3-202ENST00000396521 DAGLAQ9Y4D2 1042 aa21.85■■□□□ 1.09
EXOSC3-202ENST00000396521 SALL1Q9NSC2 1324 aa21.84■■□□□ 1.09
EXOSC3-202ENST00000396521 LDHBP07195 334 aaKnown RBP21.84■■□□□ 1.09
EXOSC3-202ENST00000396521 FXR1P51114 621 aaKnown RBP eCLIP21.84■■□□□ 1.09
EXOSC3-202ENST00000396521 ALDH1L2Q3SY69 923 aa21.84■■□□□ 1.09
EXOSC3-202ENST00000396521 CDC42EP5Q6NZY7 148 aa21.84■■□□□ 1.09
EXOSC3-202ENST00000396521 ZGPATQ8N5A5 531 aaKnown RBP21.84■■□□□ 1.09
EXOSC3-202ENST00000396521 CEP126Q9P2H0 1117 aa21.84■■□□□ 1.09
EXOSC3-202ENST00000396521 DENND2AQ9ULE3 1009 aa21.84■■□□□ 1.09
EXOSC3-202ENST00000396521 FMNL1O95466 1100 aaPredicted RBP21.83■■□□□ 1.09
EXOSC3-202ENST00000396521 GRK4P32298 578 aa21.83■■□□□ 1.09
EXOSC3-202ENST00000396521 RFX5P48382 616 aaPredicted RBP21.83■■□□□ 1.09
EXOSC3-202ENST00000396521 FASTKD5Q7L8L6 764 aaKnown RBP21.83■■□□□ 1.09
EXOSC3-202ENST00000396521 RAET1EQ8TD07 263 aa21.83■■□□□ 1.09
EXOSC3-202ENST00000396521 SSH1Q8WYL5 1049 aa21.83■■□□□ 1.09
EXOSC3-202ENST00000396521 TRIM47Q96LD4 638 aa21.83■■□□□ 1.09
EXOSC3-202ENST00000396521 TCP10Q12799 353 aa21.82■■□□□ 1.08
EXOSC3-202ENST00000396521 SLF2Q8IX21 1173 aa21.82■■□□□ 1.08
EXOSC3-202ENST00000396521 USP40Q9NVE5 1235 aa21.82■■□□□ 1.08
EXOSC3-202ENST00000396521 CPA4Q9UI42 421 aa21.82■■□□□ 1.08
EXOSC3-202ENST00000396521 COLQQ9Y215 455 aaPredicted RBP21.82■■□□□ 1.08
EXOSC3-202ENST00000396521 CEP290O15078 2479 aa21.82■■□□□ 1.08
EXOSC3-202ENST00000396521 GJB1P08034 283 aa21.81■■□□□ 1.08
EXOSC3-202ENST00000396521 UBXN2AP68543 259 aa21.81■■□□□ 1.08
EXOSC3-202ENST00000396521 ATP2B3Q16720 1220 aa21.81■■□□□ 1.08
EXOSC3-202ENST00000396521 ATG9AQ7Z3C6 839 aa21.81■■□□□ 1.08
EXOSC3-202ENST00000396521 PICK1Q9NRD5 415 aa21.81■■□□□ 1.08
EXOSC3-202ENST00000396521 ADGRA2Q96PE1 1338 aa21.8■■□□□ 1.08
EXOSC3-202ENST00000396521 ZNF316A6NFI3 1004 aaPredicted RBP21.8■■□□□ 1.08
EXOSC3-202ENST00000396521 H0YGN5 161 aa21.8■■□□□ 1.08
EXOSC3-202ENST00000396521 ENTPD3O75355 529 aa21.8■■□□□ 1.08
EXOSC3-202ENST00000396521 UBTFL1P0CB47 393 aaPredicted RBP21.8■■□□□ 1.08
EXOSC3-202ENST00000396521 OSBPP22059 807 aa21.8■■□□□ 1.08
EXOSC3-202ENST00000396521 IL15P40933 162 aaPredicted RBP21.8■■□□□ 1.08
EXOSC3-202ENST00000396521 FCGRTP55899 365 aa21.8■■□□□ 1.08
EXOSC3-202ENST00000396521 DIXDC1Q155Q3 683 aa21.8■■□□□ 1.08
EXOSC3-202ENST00000396521 HTATIP2Q9BUP3 242 aa21.8■■□□□ 1.08
EXOSC3-202ENST00000396521 IDI2Q9BXS1 227 aa21.8■■□□□ 1.08
EXOSC3-202ENST00000396521 SLC45A1Q9Y2W3 748 aa21.8■■□□□ 1.08
EXOSC3-202ENST00000396521 MYCP01106 439 aaPredicted RBP21.79■■□□□ 1.08
EXOSC3-202ENST00000396521 PRDX5P30044 214 aa21.79■■□□□ 1.08
EXOSC3-202ENST00000396521 GJA8P48165 433 aa21.79■■□□□ 1.08
EXOSC3-202ENST00000396521 NFIAQ12857 509 aa21.79■■□□□ 1.08
EXOSC3-202ENST00000396521 MOGSQ13724 837 aa21.79■■□□□ 1.08
EXOSC3-202ENST00000396521 FAM198AQ9UFP1 575 aa21.79■■□□□ 1.08
EXOSC3-202ENST00000396521 MYPNQ86TC9 1320 aa21.79■■□□□ 1.08
EXOSC3-202ENST00000396521 CT47B1P0C2W7 299 aaPredicted RBP21.78■■□□□ 1.08
EXOSC3-202ENST00000396521 BCRP11274 1271 aa21.78■■□□□ 1.08
EXOSC3-202ENST00000396521 MAP3K10Q02779 954 aa21.78■■□□□ 1.08
EXOSC3-202ENST00000396521 SLAIN1Q8ND83 568 aa21.78■■□□□ 1.08
EXOSC3-202ENST00000396521 SPTY2D1Q68D10 685 aaPredicted RBP21.77■■□□□ 1.08
EXOSC3-202ENST00000396521 SCYL3Q8IZE3 742 aa21.77■■□□□ 1.08
EXOSC3-202ENST00000396521 FAM163AQ96GL9 167 aaPredicted RBP21.77■■□□□ 1.08
EXOSC3-202ENST00000396521 BIN2Q9UBW5 565 aaPredicted RBP21.77■■□□□ 1.08
EXOSC3-202ENST00000396521 PDS5AQ29RF7 1337 aaKnown RBP21.77■■□□□ 1.07
EXOSC3-202ENST00000396521 A0A0G2JLL6 359 aaPredicted RBP21.76■■□□□ 1.07
EXOSC3-202ENST00000396521 CCL5P13501 91 aa21.76■■□□□ 1.07
EXOSC3-202ENST00000396521 CTGFP29279 349 aa21.76■■□□□ 1.07
EXOSC3-202ENST00000396521 MTFR1Q15390 333 aa21.76■■□□□ 1.07
EXOSC3-202ENST00000396521 GPAT2Q6NUI2 795 aa21.76■■□□□ 1.07
EXOSC3-202ENST00000396521 PRRT2Q7Z6L0 340 aaPredicted RBP21.76■■□□□ 1.07
EXOSC3-202ENST00000396521 DPF3Q92784 378 aa21.76■■□□□ 1.07
EXOSC3-202ENST00000396521 NR2E3Q9Y5X4 410 aa21.76■■□□□ 1.07
EXOSC3-202ENST00000396521 ZHX2Q9Y6X8 837 aa21.76■■□□□ 1.07
EXOSC3-202ENST00000396521 PHF20L1A8MW92 1017 aa21.75■■□□□ 1.07
EXOSC3-202ENST00000396521 CTNND1O60716 968 aaKnown RBP21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms