RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 ECEL1O95672 775 aa7.46□□□□□ -1.22
HMGB1P10-201ENST00000395823 GSTP1P09211 210 aaKnown RBP7.46□□□□□ -1.22
HMGB1P10-201ENST00000395823 CDC25BP30305 580 aa7.46□□□□□ -1.22
HMGB1P10-201ENST00000395823 ZNF165P49910 485 aa7.46□□□□□ -1.22
HMGB1P10-201ENST00000395823 RPL6Q02878 288 aaKnown RBP7.46□□□□□ -1.22
HMGB1P10-201ENST00000395823 AP3B2Q13367 1082 aa7.46□□□□□ -1.22
HMGB1P10-201ENST00000395823 RNFT1Q5M7Z0 435 aa7.46□□□□□ -1.22
HMGB1P10-201ENST00000395823 TXNDC11Q6PKC3 985 aa7.46□□□□□ -1.22
HMGB1P10-201ENST00000395823 GK5Q6ZS86 529 aa7.46□□□□□ -1.22
HMGB1P10-201ENST00000395823 DEPDC7Q96QD5 511 aa7.46□□□□□ -1.22
HMGB1P10-201ENST00000395823 FERD3LQ96RJ6 166 aa7.46□□□□□ -1.22
HMGB1P10-201ENST00000395823 SRPK1Q96SB4 655 aaKnown RBP7.46□□□□□ -1.22
HMGB1P10-201ENST00000395823 EMILIN2Q9BXX0 1053 aa7.46□□□□□ -1.22
HMGB1P10-201ENST00000395823 SOX17Q9H6I2 414 aaPredicted RBP7.46□□□□□ -1.22
HMGB1P10-201ENST00000395823 EHMT1Q9H9B1 1298 aa7.46□□□□□ -1.22
HMGB1P10-201ENST00000395823 MBIPQ9NS73 344 aa7.46□□□□□ -1.22
HMGB1P10-201ENST00000395823 MSRB2Q9Y3D2 182 aa7.46□□□□□ -1.22
HMGB1P10-201ENST00000395823 TM4SF5O14894 197 aa7.45□□□□□ -1.22
HMGB1P10-201ENST00000395823 TRIM37O94972 964 aa7.45□□□□□ -1.22
HMGB1P10-201ENST00000395823 HMGB1P09429 215 aaKnown RBP7.45□□□□□ -1.22
HMGB1P10-201ENST00000395823 MAP2K3P46734 347 aa7.45□□□□□ -1.22
HMGB1P10-201ENST00000395823 TNNI3KQ59H18 835 aa7.45□□□□□ -1.22
HMGB1P10-201ENST00000395823 MAP1SQ66K74 1059 aaPredicted RBP7.45□□□□□ -1.22
HMGB1P10-201ENST00000395823 SCARA3Q6AZY7 606 aa7.45□□□□□ -1.22
HMGB1P10-201ENST00000395823 SLCO4C1Q6ZQN7 724 aa7.45□□□□□ -1.22
HMGB1P10-201ENST00000395823 LSRQ86X29 649 aaPredicted RBP7.45□□□□□ -1.22
HMGB1P10-201ENST00000395823 IL22RA1Q8N6P7 574 aa7.45□□□□□ -1.22
HMGB1P10-201ENST00000395823 RBBP8NLQ8NC74 664 aaPredicted RBP7.45□□□□□ -1.22
HMGB1P10-201ENST00000395823 RNPC3Q96LT9 517 aaKnown RBP7.45□□□□□ -1.22
HMGB1P10-201ENST00000395823 TNKS2Q9H2K2 1166 aa7.45□□□□□ -1.22
HMGB1P10-201ENST00000395823 GRIN3BO60391 1043 aa7.44□□□□□ -1.22
HMGB1P10-201ENST00000395823 RGS9O75916 674 aaPredicted RBP7.44□□□□□ -1.22
HMGB1P10-201ENST00000395823 ATE1O95260 518 aa7.44□□□□□ -1.22
HMGB1P10-201ENST00000395823 BPNT1O95861 308 aa7.44□□□□□ -1.22
HMGB1P10-201ENST00000395823 ALBP02768 609 aa7.44□□□□□ -1.22
HMGB1P10-201ENST00000395823 CTSBP07858 339 aa7.44□□□□□ -1.22
HMGB1P10-201ENST00000395823 FBXW10Q5XX13 1052 aa7.44□□□□□ -1.22
HMGB1P10-201ENST00000395823 GPBAR1Q8TDU6 330 aa7.44□□□□□ -1.22
HMGB1P10-201ENST00000395823 MICAL1Q8TDZ2 1067 aa7.44□□□□□ -1.22
HMGB1P10-201ENST00000395823 ANTXR1Q9H6X2 564 aa7.44□□□□□ -1.22
HMGB1P10-201ENST00000395823 PCDHB14Q9Y5E9 798 aa7.44□□□□□ -1.22
HMGB1P10-201ENST00000395823 IGF1RP08069 1367 aa7.44□□□□□ -1.22
HMGB1P10-201ENST00000395823 SBNO2Q9Y2G9 1366 aa7.44□□□□□ -1.22
HMGB1P10-201ENST00000395823 H3BM21 787 aa7.43□□□□□ -1.22
HMGB1P10-201ENST00000395823 GFRA2O00451 464 aa7.43□□□□□ -1.22
HMGB1P10-201ENST00000395823 EPXP11678 715 aa7.43□□□□□ -1.22
HMGB1P10-201ENST00000395823 AFF1P51825 1210 aaKnown RBP7.43□□□□□ -1.22
HMGB1P10-201ENST00000395823 CABP4P57796 275 aa7.43□□□□□ -1.22
HMGB1P10-201ENST00000395823 GSTM4Q03013 218 aa7.43□□□□□ -1.22
HMGB1P10-201ENST00000395823 RUFY4Q6ZNE9 571 aa7.43□□□□□ -1.22
HMGB1P10-201ENST00000395823 C1orf229Q6ZS94 237 aaPredicted RBP7.43□□□□□ -1.22
HMGB1P10-201ENST00000395823 LRP10Q7Z4F1 713 aa7.43□□□□□ -1.22
HMGB1P10-201ENST00000395823 SLC7A3Q8WY07 619 aa7.43□□□□□ -1.22
HMGB1P10-201ENST00000395823 ZC3H12CQ9C0D7 883 aaKnown RBP7.43□□□□□ -1.22
HMGB1P10-201ENST00000395823 CCDC86Q9H6F5 360 aaKnown RBP7.43□□□□□ -1.22
HMGB1P10-201ENST00000395823 JPH1Q9HDC5 661 aaPredicted RBP7.43□□□□□ -1.22
HMGB1P10-201ENST00000395823 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.43□□□□□ -1.22
HMGB1P10-201ENST00000395823 LINC01387J3KSC0 135 aa7.42□□□□□ -1.22
HMGB1P10-201ENST00000395823 U2SURPO15042 1029 aaKnown RBP7.42□□□□□ -1.22
HMGB1P10-201ENST00000395823 VSIG8P0DPA2 414 aa7.42□□□□□ -1.22
HMGB1P10-201ENST00000395823 PIP4K2BP78356 416 aa7.42□□□□□ -1.22
HMGB1P10-201ENST00000395823 DDR2Q16832 855 aa7.42□□□□□ -1.22
HMGB1P10-201ENST00000395823 C8orf86Q6ZUL3 223 aa7.42□□□□□ -1.22
HMGB1P10-201ENST00000395823 CACTIN-AS1Q8N1I8 211 aa7.42□□□□□ -1.22
HMGB1P10-201ENST00000395823 OR6P1Q8NGX9 317 aa7.42□□□□□ -1.22
HMGB1P10-201ENST00000395823 KCNB2Q92953 911 aa7.42□□□□□ -1.22
HMGB1P10-201ENST00000395823 CRBNQ96SW2 442 aa7.42□□□□□ -1.22
HMGB1P10-201ENST00000395823 KANSL2Q9H9L4 492 aa7.42□□□□□ -1.22
HMGB1P10-201ENST00000395823 ACTR10Q9NZ32 417 aa7.42□□□□□ -1.22
HMGB1P10-201ENST00000395823 NXF1Q9UBU9 619 aaKnown RBP7.42□□□□□ -1.22
HMGB1P10-201ENST00000395823 NSFL1CQ9UNZ2 370 aaKnown RBP7.42□□□□□ -1.22
HMGB1P10-201ENST00000395823 CCDC85CA6NKD9 419 aa7.41□□□□□ -1.22
HMGB1P10-201ENST00000395823 IMPDH2P12268 514 aa7.41□□□□□ -1.22
HMGB1P10-201ENST00000395823 CASP7P55210 303 aa7.41□□□□□ -1.22
HMGB1P10-201ENST00000395823 C19orf57Q0VDD7 668 aa7.41□□□□□ -1.22
HMGB1P10-201ENST00000395823 INPP5AQ14642 412 aa7.41□□□□□ -1.22
HMGB1P10-201ENST00000395823 WIPI1Q5MNZ9 446 aaPredicted RBP7.41□□□□□ -1.22
HMGB1P10-201ENST00000395823 LRFN4Q6PJG9 635 aa7.41□□□□□ -1.22
HMGB1P10-201ENST00000395823 GOLGA6L1Q8N7Z2 621 aa7.41□□□□□ -1.22
HMGB1P10-201ENST00000395823 DDX54Q8TDD1 881 aaKnown RBP7.41□□□□□ -1.22
HMGB1P10-201ENST00000395823 WNT8BQ93098 351 aa7.41□□□□□ -1.22
HMGB1P10-201ENST00000395823 CARD10Q9BWT7 1032 aa7.41□□□□□ -1.22
HMGB1P10-201ENST00000395823 COL25A1Q9BXS0 654 aaPredicted RBP7.41□□□□□ -1.22
HMGB1P10-201ENST00000395823 ST7Q9NRC1 585 aa7.41□□□□□ -1.22
HMGB1P10-201ENST00000395823 PPME1Q9Y570 386 aa7.41□□□□□ -1.22
HMGB1P10-201ENST00000395823 PRR36Q9H6K5 1346 aa7.41□□□□□ -1.22
HMGB1P10-201ENST00000395823 FAM177BA6PVY3 158 aa7.4□□□□□ -1.22
HMGB1P10-201ENST00000395823 MEIS3P2A8K0S8 358 aa7.4□□□□□ -1.22
HMGB1P10-201ENST00000395823 ENPP3O14638 875 aa7.4□□□□□ -1.22
HMGB1P10-201ENST00000395823 FSCN2O14926 492 aa7.4□□□□□ -1.22
HMGB1P10-201ENST00000395823 PPM1GO15355 546 aaPredicted RBP7.4□□□□□ -1.22
HMGB1P10-201ENST00000395823 ZNF862O60290 1169 aa7.4□□□□□ -1.22
HMGB1P10-201ENST00000395823 HTR3BO95264 441 aa7.4□□□□□ -1.22
HMGB1P10-201ENST00000395823 HSD3B2P26439 372 aa7.4□□□□□ -1.22
HMGB1P10-201ENST00000395823 MAOBP27338 520 aa7.4□□□□□ -1.22
HMGB1P10-201ENST00000395823 KRT76Q01546 638 aa7.4□□□□□ -1.22
HMGB1P10-201ENST00000395823 LILRB2Q8N423 598 aa7.4□□□□□ -1.22
HMGB1P10-201ENST00000395823 ACDQ96AP0 544 aa7.4□□□□□ -1.22
HMGB1P10-201ENST00000395823 PLPPR2Q96GM1 343 aa7.4□□□□□ -1.22
HMGB1P10-201ENST00000395823 CCDC113Q9H0I3 377 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms