RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 USP44Q9H0E7 712 aa26.48■■□□□ 1.83
TRAF4-203ENST00000394925 PTPRCP08575 1304 aa26.47■■□□□ 1.83
TRAF4-203ENST00000394925 KIF16BQ96L93 1317 aa26.47■■□□□ 1.83
TRAF4-203ENST00000394925 ECM2O94769 699 aaPredicted RBP26.47■■□□□ 1.83
TRAF4-203ENST00000394925 MYH13Q9UKX3 1938 aa26.47■■□□□ 1.83
TRAF4-203ENST00000394925 CEP290O15078 2479 aa26.46■■□□□ 1.83
TRAF4-203ENST00000394925 ZNF521Q96K83 1311 aa26.46■■□□□ 1.83
TRAF4-203ENST00000394925 AK9Q5TCS8 1911 aa26.46■■□□□ 1.83
TRAF4-203ENST00000394925 INPP5BP32019 993 aa26.46■■□□□ 1.83
TRAF4-203ENST00000394925 RPAP1Q9BWH6 1393 aaPredicted RBP26.46■■□□□ 1.83
TRAF4-203ENST00000394925 SLC5A1P13866 664 aa26.45■■□□□ 1.82
TRAF4-203ENST00000394925 PPATQ06203 517 aa26.45■■□□□ 1.82
TRAF4-203ENST00000394925 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.45■■□□□ 1.82
TRAF4-203ENST00000394925 WDR66Q8TBY9 1149 aa26.45■■□□□ 1.82
TRAF4-203ENST00000394925 EYA2O00167 538 aa26.44■■□□□ 1.82
TRAF4-203ENST00000394925 TCP10Q12799 353 aa26.44■■□□□ 1.82
TRAF4-203ENST00000394925 FAM151AQ8WW52 585 aa26.44■■□□□ 1.82
TRAF4-203ENST00000394925 SSH1Q8WYL5 1049 aa26.44■■□□□ 1.82
TRAF4-203ENST00000394925 ZEB1P37275 1124 aaPredicted RBP26.43■■□□□ 1.82
TRAF4-203ENST00000394925 RFX5P48382 616 aaPredicted RBP26.43■■□□□ 1.82
TRAF4-203ENST00000394925 LPIN2Q92539 896 aa26.43■■□□□ 1.82
TRAF4-203ENST00000394925 CPA4Q9UI42 421 aa26.43■■□□□ 1.82
TRAF4-203ENST00000394925 GNRH1P01148 92 aa26.42■■□□□ 1.82
TRAF4-203ENST00000394925 DIXDC1Q155Q3 683 aa26.42■■□□□ 1.82
TRAF4-203ENST00000394925 C17orf99Q6UX52 265 aa26.42■■□□□ 1.82
TRAF4-203ENST00000394925 DAGLAQ9Y4D2 1042 aa26.42■■□□□ 1.82
TRAF4-203ENST00000394925 CDC42EP5Q6NZY7 148 aa26.41■■□□□ 1.82
TRAF4-203ENST00000394925 ZNF316A6NFI3 1004 aaPredicted RBP26.4■■□□□ 1.82
TRAF4-203ENST00000394925 PDHXO00330 501 aa26.4■■□□□ 1.82
TRAF4-203ENST00000394925 PRMT2P55345 433 aa26.4■■□□□ 1.82
TRAF4-203ENST00000394925 NFIAQ12857 509 aa26.4■■□□□ 1.82
TRAF4-203ENST00000394925 ANKRD23Q86SG2 305 aa26.4■■□□□ 1.82
TRAF4-203ENST00000394925 ZNF112Q9UJU3 913 aa26.4■■□□□ 1.82
TRAF4-203ENST00000394925 CTGFP29279 349 aa26.39■■□□□ 1.82
TRAF4-203ENST00000394925 PRDX5P30044 214 aa26.39■■□□□ 1.82
TRAF4-203ENST00000394925 PSMC4P43686 418 aa26.39■■□□□ 1.82
TRAF4-203ENST00000394925 ATG9AQ7Z3C6 839 aa26.39■■□□□ 1.82
TRAF4-203ENST00000394925 TRIM47Q96LD4 638 aa26.38■■□□□ 1.81
TRAF4-203ENST00000394925 SIL1Q9H173 461 aa26.38■■□□□ 1.81
TRAF4-203ENST00000394925 KCNH4Q9UQ05 1017 aa26.38■■□□□ 1.81
TRAF4-203ENST00000394925 COLQQ9Y215 455 aaPredicted RBP26.38■■□□□ 1.81
TRAF4-203ENST00000394925 E9PSI1 815 aa26.37■■□□□ 1.81
TRAF4-203ENST00000394925 LDHBP07195 334 aaKnown RBP26.37■■□□□ 1.81
TRAF4-203ENST00000394925 FXR1P51114 621 aaKnown RBP eCLIP26.37■■□□□ 1.81
TRAF4-203ENST00000394925 USP40Q9NVE5 1235 aa26.37■■□□□ 1.81
TRAF4-203ENST00000394925 FAM198AQ9UFP1 575 aa26.37■■□□□ 1.81
TRAF4-203ENST00000394925 SRRDQ9UH36 339 aa26.37■■□□□ 1.81
TRAF4-203ENST00000394925 FMNL1O95466 1100 aaPredicted RBP26.36■■□□□ 1.81
TRAF4-203ENST00000394925 MTFR1Q15390 333 aa26.36■■□□□ 1.81
TRAF4-203ENST00000394925 ATP2B3Q16720 1220 aa26.36■■□□□ 1.81
TRAF4-203ENST00000394925 GNL3LQ9NVN8 582 aaKnown RBP26.36■■□□□ 1.81
TRAF4-203ENST00000394925 OSBPP22059 807 aa26.35■■□□□ 1.81
TRAF4-203ENST00000394925 HOXD10P28358 340 aa26.35■■□□□ 1.81
TRAF4-203ENST00000394925 MOGSQ13724 837 aa26.35■■□□□ 1.81
TRAF4-203ENST00000394925 NOL9Q5SY16 702 aaKnown RBP26.35■■□□□ 1.81
TRAF4-203ENST00000394925 ZFPM1Q8IX07 1006 aa26.35■■□□□ 1.81
TRAF4-203ENST00000394925 RAET1EQ8TD07 263 aa26.35■■□□□ 1.81
TRAF4-203ENST00000394925 CEP126Q9P2H0 1117 aa26.35■■□□□ 1.81
TRAF4-203ENST00000394925 ADGRA2Q96PE1 1338 aa26.35■■□□□ 1.81
TRAF4-203ENST00000394925 TRIOBPQ9H2D6 2365 aa26.34■■□□□ 1.81
TRAF4-203ENST00000394925 H0YGN5 161 aa26.34■■□□□ 1.81
TRAF4-203ENST00000394925 CIAO1O76071 339 aa26.32■■□□□ 1.8
TRAF4-203ENST00000394925 UBTFL1P0CB47 393 aaPredicted RBP26.32■■□□□ 1.8
TRAF4-203ENST00000394925 GRK4P32298 578 aa26.32■■□□□ 1.8
TRAF4-203ENST00000394925 PHKA1P46020 1223 aa26.32■■□□□ 1.8
TRAF4-203ENST00000394925 SHISA4Q96DD7 197 aa26.32■■□□□ 1.8
TRAF4-203ENST00000394925 SMC4Q9NTJ3 1288 aa26.32■■□□□ 1.8
TRAF4-203ENST00000394925 FBXO3Q9UK99 471 aa26.32■■□□□ 1.8
TRAF4-203ENST00000394925 DENND2AQ9ULE3 1009 aa26.32■■□□□ 1.8
TRAF4-203ENST00000394925 MYPNQ86TC9 1320 aa26.32■■□□□ 1.8
TRAF4-203ENST00000394925 SLFN5Q08AF3 891 aa26.31■■□□□ 1.8
TRAF4-203ENST00000394925 ALDH1L2Q3SY69 923 aa26.31■■□□□ 1.8
TRAF4-203ENST00000394925 PARK7Q99497 189 aaKnown RBP26.31■■□□□ 1.8
TRAF4-203ENST00000394925 SALL1Q9NSC2 1324 aa26.31■■□□□ 1.8
TRAF4-203ENST00000394925 MYH2Q9UKX2 1941 aa26.3■■□□□ 1.8
TRAF4-203ENST00000394925 CXCL11O14625 94 aa26.3■■□□□ 1.8
TRAF4-203ENST00000394925 CYP2C8P10632 490 aa26.3■■□□□ 1.8
TRAF4-203ENST00000394925 GPAT2Q6NUI2 795 aa26.3■■□□□ 1.8
TRAF4-203ENST00000394925 BIN2Q9UBW5 565 aaPredicted RBP26.3■■□□□ 1.8
TRAF4-203ENST00000394925 SEMA3EO15041 775 aa26.29■■□□□ 1.8
TRAF4-203ENST00000394925 RGS3P49796 1198 aa26.29■■□□□ 1.8
TRAF4-203ENST00000394925 DPF3Q92784 378 aa26.29■■□□□ 1.8
TRAF4-203ENST00000394925 PA2G4Q9UQ80 394 aaKnown RBP26.29■■□□□ 1.8
TRAF4-203ENST00000394925 DOCK2Q92608 1830 aa26.28■■□□□ 1.8
TRAF4-203ENST00000394925 PHF20L1A8MW92 1017 aa26.28■■□□□ 1.8
TRAF4-203ENST00000394925 BCRP11274 1271 aa26.28■■□□□ 1.8
TRAF4-203ENST00000394925 NKX2-3Q8TAU0 364 aa26.28■■□□□ 1.8
TRAF4-203ENST00000394925 PICK1Q9NRD5 415 aa26.28■■□□□ 1.8
TRAF4-203ENST00000394925 ZHX2Q9Y6X8 837 aa26.28■■□□□ 1.8
TRAF4-203ENST00000394925 CCL5P13501 91 aa26.27■■□□□ 1.8
TRAF4-203ENST00000394925 ADORA1P30542 326 aa26.27■■□□□ 1.8
TRAF4-203ENST00000394925 IL15P40933 162 aaPredicted RBP26.27■■□□□ 1.8
TRAF4-203ENST00000394925 FCGRTP55899 365 aa26.27■■□□□ 1.8
TRAF4-203ENST00000394925 PRKCZQ05513 592 aa26.27■■□□□ 1.8
TRAF4-203ENST00000394925 ZSCAN29Q8IWY8 852 aaPredicted RBP26.27■■□□□ 1.8
TRAF4-203ENST00000394925 SCYL3Q8IZE3 742 aa26.27■■□□□ 1.8
TRAF4-203ENST00000394925 CDCA7LQ96GN5 454 aa26.27■■□□□ 1.8
TRAF4-203ENST00000394925 IDI2Q9BXS1 227 aa26.27■■□□□ 1.8
TRAF4-203ENST00000394925 LRRFIP2Q9Y608 721 aaKnown RBP26.27■■□□□ 1.8
TRAF4-203ENST00000394925 ATRNL1Q5VV63 1379 aa26.27■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms