RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 BCL11BQ9C0K0 894 aaPredicted RBP21.29■■□□□ 1
PCDHA1-202ENST00000394633 ZNF215Q9UL58 517 aaPredicted RBP21.29■■□□□ 1
PCDHA1-202ENST00000394633 ECM29Q5VYK3 1845 aa21.29■■□□□ 1
PCDHA1-202ENST00000394633 DHX16O60231 1041 aaKnown RBP21.29■■□□□ 1
PCDHA1-202ENST00000394633 ZFYP08048 801 aaPredicted RBP21.29■■□□□ 1
PCDHA1-202ENST00000394633 XPO4Q9C0E2 1151 aaKnown RBP21.29■■□□□ 1
PCDHA1-202ENST00000394633 GORABQ5T7V8 394 aa21.28■■□□□ 1
PCDHA1-202ENST00000394633 PUS7LQ9H0K6 701 aaKnown RBP21.28■■□□□ 1
PCDHA1-202ENST00000394633 IFNKQ9P0W0 207 aa21.28■■□□□ 1
PCDHA1-202ENST00000394633 AKAP11Q9UKA4 1901 aa21.28■■□□□ 1
PCDHA1-202ENST00000394633 ZNF202O95125 648 aa21.28■■□□□ 1
PCDHA1-202ENST00000394633 SLC3A2P08195 630 aaKnown RBP21.28■■□□□ 1
PCDHA1-202ENST00000394633 NLRP12P59046 1061 aa21.28■■□□□ 1
PCDHA1-202ENST00000394633 AXDND1Q5T1B0 1012 aaPredicted RBP21.28■■□□□ 1
PCDHA1-202ENST00000394633 NCOA7Q8NI08 942 aa21.28■■□□□ 1
PCDHA1-202ENST00000394633 APPBP2Q92624 585 aa21.28■■□□□ 1
PCDHA1-202ENST00000394633 CICQ96RK0 1608 aaPredicted RBP21.27■■□□□ 1
PCDHA1-202ENST00000394633 BIN1O00499 593 aa21.27■■□□□ 1
PCDHA1-202ENST00000394633 ZAP70P43403 619 aa21.27■■□□□ 1
PCDHA1-202ENST00000394633 KIF23Q02241 960 aaPredicted RBP21.27■■□□□ 1
PCDHA1-202ENST00000394633 ZRSR1Q15695 479 aaKnown RBP21.27■■□□□ 1
PCDHA1-202ENST00000394633 CCDC57Q2TAC2 916 aa21.27■■□□□ 1
PCDHA1-202ENST00000394633 ANO1Q5XXA6 986 aa21.27■■□□□ 1
PCDHA1-202ENST00000394633 MYO5AQ9Y4I1 1855 aaKnown RBP21.27■■□□□ 1
PCDHA1-202ENST00000394633 COL5A3P25940 1745 aaPredicted RBP21.27■□□□□ 0.99
PCDHA1-202ENST00000394633 SMC2O95347 1197 aa21.27■□□□□ 0.99
PCDHA1-202ENST00000394633 CRKLP46109 303 aaKnown RBP21.27■□□□□ 0.99
PCDHA1-202ENST00000394633 ARMCX5Q6P1M9 558 aa21.27■□□□□ 0.99
PCDHA1-202ENST00000394633 INTS5Q6P9B9 1019 aaKnown RBP21.27■□□□□ 0.99
PCDHA1-202ENST00000394633 ISCA1Q9BUE6 129 aa21.27■□□□□ 0.99
PCDHA1-202ENST00000394633 DDX41Q9UJV9 622 aaKnown RBP21.27■□□□□ 0.99
PCDHA1-202ENST00000394633 AKAP2Q9Y2D5 859 aa21.27■□□□□ 0.99
PCDHA1-202ENST00000394633 CPLX1O14810 134 aa21.26■□□□□ 0.99
PCDHA1-202ENST00000394633 PFKFB1P16118 471 aa21.26■□□□□ 0.99
PCDHA1-202ENST00000394633 NCAPHQ15003 741 aa21.26■□□□□ 0.99
PCDHA1-202ENST00000394633 E4F1Q66K89 784 aaPredicted RBP21.26■□□□□ 0.99
PCDHA1-202ENST00000394633 SYNE3Q6ZMZ3 975 aa21.26■□□□□ 0.99
PCDHA1-202ENST00000394633 TMC6Q7Z403 805 aa21.26■□□□□ 0.99
PCDHA1-202ENST00000394633 MROH7-TTC4A0A0A0MT08 1334 aa21.26■□□□□ 0.99
PCDHA1-202ENST00000394633 CMA1P23946 247 aa21.25■□□□□ 0.99
PCDHA1-202ENST00000394633 PI16Q6UXB8 463 aa21.25■□□□□ 0.99
PCDHA1-202ENST00000394633 RALYLQ86SE5 291 aaKnown RBP21.25■□□□□ 0.99
PCDHA1-202ENST00000394633 KIF18AQ8NI77 898 aa21.25■□□□□ 0.99
PCDHA1-202ENST00000394633 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.25■□□□□ 0.99
PCDHA1-202ENST00000394633 V9GYY5 206 aaPredicted RBP21.25■□□□□ 0.99
PCDHA1-202ENST00000394633 WDHD1O75717 1129 aaPredicted RBP21.25■□□□□ 0.99
PCDHA1-202ENST00000394633 CCDC150Q8NCX0 1101 aa21.25■□□□□ 0.99
PCDHA1-202ENST00000394633 SMARCC1Q92922 1105 aaPredicted RBP21.25■□□□□ 0.99
PCDHA1-202ENST00000394633 WDR19Q8NEZ3 1342 aa21.25■□□□□ 0.99
PCDHA1-202ENST00000394633 ZNF213O14771 459 aa21.24■□□□□ 0.99
PCDHA1-202ENST00000394633 GPAA1O43292 621 aa21.24■□□□□ 0.99
PCDHA1-202ENST00000394633 HLFQ16534 295 aa21.24■□□□□ 0.99
PCDHA1-202ENST00000394633 ERO1AQ96HE7 468 aa21.24■□□□□ 0.99
PCDHA1-202ENST00000394633 CCDC85AQ96PX6 553 aaPredicted RBP21.24■□□□□ 0.99
PCDHA1-202ENST00000394633 FBXO3Q9UK99 471 aa21.24■□□□□ 0.99
PCDHA1-202ENST00000394633 RREB1Q92766 1687 aa21.24■□□□□ 0.99
PCDHA1-202ENST00000394633 KIF2AO00139 706 aaPredicted RBP21.24■□□□□ 0.99
PCDHA1-202ENST00000394633 ZNF397Q8NF99 534 aaPredicted RBP21.24■□□□□ 0.99
PCDHA1-202ENST00000394633 NBPF3Q9H094 633 aa21.24■□□□□ 0.99
PCDHA1-202ENST00000394633 ABCC12Q96J65 1359 aa21.23■□□□□ 0.99
PCDHA1-202ENST00000394633 LINC00116Q8NCU8 138 aa21.23■□□□□ 0.99
PCDHA1-202ENST00000394633 PPP1R13BQ96KQ4 1090 aa21.23■□□□□ 0.99
PCDHA1-202ENST00000394633 CCDC87Q9NVE4 849 aa21.23■□□□□ 0.99
PCDHA1-202ENST00000394633 DENND2AQ9ULE3 1009 aa21.23■□□□□ 0.99
PCDHA1-202ENST00000394633 TBC1D2BQ9UPU7 963 aa21.23■□□□□ 0.99
PCDHA1-202ENST00000394633 TCIRG1Q13488 830 aa21.23■□□□□ 0.99
PCDHA1-202ENST00000394633 KMT5BQ4FZB7 885 aa21.23■□□□□ 0.99
PCDHA1-202ENST00000394633 KIF6Q6ZMV9 814 aa21.23■□□□□ 0.99
PCDHA1-202ENST00000394633 NKX2-3Q8TAU0 364 aa21.23■□□□□ 0.99
PCDHA1-202ENST00000394633 AIFM3Q96NN9 605 aa21.23■□□□□ 0.99
PCDHA1-202ENST00000394633 MORC2Q9Y6X9 1032 aaPredicted RBP21.23■□□□□ 0.99
PCDHA1-202ENST00000394633 MAP3K15Q6ZN16 1313 aa21.22■□□□□ 0.99
PCDHA1-202ENST00000394633 RIC1Q4ADV7 1423 aa21.22■□□□□ 0.99
PCDHA1-202ENST00000394633 SLU7O95391 586 aaKnown RBP21.22■□□□□ 0.99
PCDHA1-202ENST00000394633 MARCKSP29966 332 aaPredicted RBP21.22■□□□□ 0.99
PCDHA1-202ENST00000394633 IL6STP40189 918 aaPredicted RBP21.22■□□□□ 0.99
PCDHA1-202ENST00000394633 TPM4P67936 248 aa21.22■□□□□ 0.99
PCDHA1-202ENST00000394633 SLC39A14Q15043 492 aa21.22■□□□□ 0.99
PCDHA1-202ENST00000394633 SFPQP23246 707 aaKnown RBP eCLIP21.21■□□□□ 0.99
PCDHA1-202ENST00000394633 ZMYM6O95789 1325 aa21.21■□□□□ 0.99
PCDHA1-202ENST00000394633 ZNF831Q5JPB2 1677 aa21.21■□□□□ 0.99
PCDHA1-202ENST00000394633 EIF5P55010 431 aaKnown RBP21.21■□□□□ 0.99
PCDHA1-202ENST00000394633 ELF2Q15723 593 aa21.21■□□□□ 0.99
PCDHA1-202ENST00000394633 ISM2Q6H9L7 571 aa21.21■□□□□ 0.99
PCDHA1-202ENST00000394633 HSD3B7Q9H2F3 369 aa21.21■□□□□ 0.99
PCDHA1-202ENST00000394633 NUP98P52948 1817 aa21.21■□□□□ 0.99
PCDHA1-202ENST00000394633 PSDA5PKW4 1024 aaPredicted RBP21.2■□□□□ 0.98
PCDHA1-202ENST00000394633 IKBKBO14920 756 aa21.2■□□□□ 0.98
PCDHA1-202ENST00000394633 LMOD1P29536 600 aaPredicted RBP21.2■□□□□ 0.98
PCDHA1-202ENST00000394633 KCNJ6P48051 423 aa21.2■□□□□ 0.98
PCDHA1-202ENST00000394633 FANCCQ00597 558 aa21.2■□□□□ 0.98
PCDHA1-202ENST00000394633 CYB5R4Q7L1T6 521 aa21.2■□□□□ 0.98
PCDHA1-202ENST00000394633 TIGD1Q96MW7 591 aa21.2■□□□□ 0.98
PCDHA1-202ENST00000394633 MCAMP43121 646 aa21.2■□□□□ 0.98
PCDHA1-202ENST00000394633 TAF7LQ5H9L4 462 aa21.2■□□□□ 0.98
PCDHA1-202ENST00000394633 SMIM5Q71RC9 77 aa21.2■□□□□ 0.98
PCDHA1-202ENST00000394633 DZIP3Q86Y13 1208 aaKnown RBP21.2■□□□□ 0.98
PCDHA1-202ENST00000394633 TBC1D10CQ8IV04 446 aa21.2■□□□□ 0.98
PCDHA1-202ENST00000394633 RGS22Q8NE09 1264 aa21.2■□□□□ 0.98
PCDHA1-202ENST00000394633 FAM89AQ96GI7 184 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms