RNA–Protein interactions for RNA: ENST00000394342.2

APLF-202, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best) BASIC

Gene APLF, Length 1,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-202ENST00000394342 TNNI2P48788 182 aa10.48□□□□□ -0.73
APLF-202ENST00000394342 DIXDC1Q155Q3 683 aa10.48□□□□□ -0.73
APLF-202ENST00000394342 PRAMEF18Q5VWM3 479 aa10.48□□□□□ -0.73
APLF-202ENST00000394342 CYP4F22Q6NT55 531 aa10.48□□□□□ -0.73
APLF-202ENST00000394342 APOBEC3HQ6NTF7 200 aaKnown RBP10.48□□□□□ -0.73
APLF-202ENST00000394342 PAXIP1Q6ZW49 1069 aaPredicted RBP10.48□□□□□ -0.73
APLF-202ENST00000394342 AACSQ86V21 672 aa10.48□□□□□ -0.73
APLF-202ENST00000394342 DZIP1Q86YF9 867 aaKnown RBP10.48□□□□□ -0.73
APLF-202ENST00000394342 CLASRPQ8N2M8 674 aaKnown RBP10.48□□□□□ -0.73
APLF-202ENST00000394342 CCDC8Q9H0W5 538 aaPredicted RBP10.48□□□□□ -0.73
APLF-202ENST00000394342 TMOD2Q9NZR1 351 aa10.48□□□□□ -0.73
APLF-202ENST00000394342 ABCF2Q9UG63 623 aa10.48□□□□□ -0.73
APLF-202ENST00000394342 DAGLAQ9Y4D2 1042 aa10.48□□□□□ -0.73
APLF-202ENST00000394342 GAKO14976 1311 aa10.48□□□□□ -0.73
APLF-202ENST00000394342 DOCK1Q14185 1865 aa10.48□□□□□ -0.73
APLF-202ENST00000394342 PHIPQ8WWQ0 1821 aa10.47□□□□□ -0.73
APLF-202ENST00000394342 IGSF3O75054 1194 aa10.47□□□□□ -0.73
APLF-202ENST00000394342 MAP2K2P36507 400 aa10.47□□□□□ -0.73
APLF-202ENST00000394342 TTLL12Q14166 644 aaPredicted RBP10.47□□□□□ -0.73
APLF-202ENST00000394342 RASA3Q14644 834 aa10.47□□□□□ -0.73
APLF-202ENST00000394342 SUPT20HL1Q3ZLR7 823 aa10.47□□□□□ -0.73
APLF-202ENST00000394342 RGMBQ6NW40 437 aa10.47□□□□□ -0.73
APLF-202ENST00000394342 PI16Q6UXB8 463 aa10.47□□□□□ -0.73
APLF-202ENST00000394342 ARMC9Q7Z3E5 817 aa10.47□□□□□ -0.73
APLF-202ENST00000394342 FAM83AQ86UY5 434 aa10.47□□□□□ -0.73
APLF-202ENST00000394342 PLCD3Q8N3E9 789 aa10.47□□□□□ -0.73
APLF-202ENST00000394342 CCDC102AQ96A19 550 aa10.47□□□□□ -0.73
APLF-202ENST00000394342 FAM163AQ96GL9 167 aaPredicted RBP10.47□□□□□ -0.73
APLF-202ENST00000394342 IL1RAPL2Q9NP60 686 aa10.47□□□□□ -0.73
APLF-202ENST00000394342 TLR7Q9NYK1 1049 aaKnown RBP10.47□□□□□ -0.73
APLF-202ENST00000394342 RPAP1Q9BWH6 1393 aaPredicted RBP10.47□□□□□ -0.73
APLF-202ENST00000394342 SIPA1L1O43166 1804 aa10.47□□□□□ -0.73
APLF-202ENST00000394342 TCP10L2B9ZVM9 353 aa10.46□□□□□ -0.73
APLF-202ENST00000394342 APBB1O00213 710 aa10.46□□□□□ -0.73
APLF-202ENST00000394342 PITPNM1O00562 1244 aa10.46□□□□□ -0.73
APLF-202ENST00000394342 ZNF157P51786 506 aaPredicted RBP10.46□□□□□ -0.73
APLF-202ENST00000394342 GSTO1P78417 241 aa10.46□□□□□ -0.73
APLF-202ENST00000394342 MAP2K1Q02750 393 aaPredicted RBP10.46□□□□□ -0.73
APLF-202ENST00000394342 MECOMQ03112 1051 aa10.46□□□□□ -0.73
APLF-202ENST00000394342 NOGQ13253 232 aa10.46□□□□□ -0.73
APLF-202ENST00000394342 AAMPQ13685 434 aa10.46□□□□□ -0.73
APLF-202ENST00000394342 CRBNQ96SW2 442 aa10.46□□□□□ -0.73
APLF-202ENST00000394342 MROH7-TTC4A0A0A0MT08 1334 aa10.46□□□□□ -0.73
APLF-202ENST00000394342 UNCXA6NJT0 531 aa10.45□□□□□ -0.74
APLF-202ENST00000394342 FAM155AB1AL88 458 aaPredicted RBP10.45□□□□□ -0.74
APLF-202ENST00000394342 UBE2Q2LH0YL09 131 aa10.45□□□□□ -0.74
APLF-202ENST00000394342 PPP1R12BO60237 982 aaPredicted RBP10.45□□□□□ -0.74
APLF-202ENST00000394342 MAP4K4O95819 1239 aaPredicted RBP10.45□□□□□ -0.74
APLF-202ENST00000394342 CYP2E1P05181 493 aaPredicted RBP10.45□□□□□ -0.74
APLF-202ENST00000394342 LDHCP07864 332 aa10.45□□□□□ -0.74
APLF-202ENST00000394342 SLC10A3P09131 477 aa10.45□□□□□ -0.74
APLF-202ENST00000394342 IFIT2P09913 472 aaKnown RBP10.45□□□□□ -0.74
APLF-202ENST00000394342 HSPA1AP0DMV8 641 aaKnown RBP10.45□□□□□ -0.74
APLF-202ENST00000394342 HSPA1BP0DMV9 641 aaKnown RBP10.45□□□□□ -0.74
APLF-202ENST00000394342 GRM1Q13255 1194 aa10.45□□□□□ -0.74
APLF-202ENST00000394342 MAP3K11Q16584 847 aa10.45□□□□□ -0.74
APLF-202ENST00000394342 NBPF12Q5TAG4 269 aaPredicted RBP10.45□□□□□ -0.74
APLF-202ENST00000394342 CDC42EP5Q6NZY7 148 aa10.45□□□□□ -0.74
APLF-202ENST00000394342 TBC1D9Q6ZT07 1266 aa10.45□□□□□ -0.74
APLF-202ENST00000394342 MOB2Q70IA6 237 aa10.45□□□□□ -0.74
APLF-202ENST00000394342 ZNF384Q8TF68 577 aa10.45□□□□□ -0.74
APLF-202ENST00000394342 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.45□□□□□ -0.74
APLF-202ENST00000394342 SPOCK2Q92563 424 aa10.45□□□□□ -0.74
APLF-202ENST00000394342 NSUN4Q96CB9 384 aaKnown RBP10.45□□□□□ -0.74
APLF-202ENST00000394342 TEPSINQ96N21 525 aa10.45□□□□□ -0.74
APLF-202ENST00000394342 LRRCC1Q9C099 1032 aa10.45□□□□□ -0.74
APLF-202ENST00000394342 DCTPP1Q9H773 170 aa10.45□□□□□ -0.74
APLF-202ENST00000394342 SNRKQ9NRH2 765 aa10.45□□□□□ -0.74
APLF-202ENST00000394342 USP40Q9NVE5 1235 aa10.45□□□□□ -0.74
APLF-202ENST00000394342 RAI14Q9P0K7 980 aa10.45□□□□□ -0.74
APLF-202ENST00000394342 LRP2BPQ9P2M1 347 aa10.45□□□□□ -0.74
APLF-202ENST00000394342 RFX7Q2KHR2 1363 aa10.44□□□□□ -0.74
APLF-202ENST00000394342 GPR75-ASB3A0A0A6YYF3 556 aa10.44□□□□□ -0.74
APLF-202ENST00000394342 AOC2O75106 756 aa10.44□□□□□ -0.74
APLF-202ENST00000394342 ZAP70P43403 619 aa10.44□□□□□ -0.74
APLF-202ENST00000394342 IREB2P48200 963 aaKnown RBP10.44□□□□□ -0.74
APLF-202ENST00000394342 CACNB3P54284 484 aa10.44□□□□□ -0.74
APLF-202ENST00000394342 LDLRAD1Q5T700 205 aa10.44□□□□□ -0.74
APLF-202ENST00000394342 TMED8Q6PL24 325 aaPredicted RBP10.44□□□□□ -0.74
APLF-202ENST00000394342 RASAL3Q86YV0 1011 aa10.44□□□□□ -0.74
APLF-202ENST00000394342 FAM151AQ8WW52 585 aa10.44□□□□□ -0.74
APLF-202ENST00000394342 HOOK2Q96ED9 719 aa10.44□□□□□ -0.74
APLF-202ENST00000394342 TMEM39BQ9GZU3 492 aa10.44□□□□□ -0.74
APLF-202ENST00000394342 WBP1LQ9NX94 342 aa10.44□□□□□ -0.74
APLF-202ENST00000394342 ANGEL1Q9UNK9 670 aaKnown RBP10.44□□□□□ -0.74
APLF-202ENST00000394342 PCDHB15Q9Y5E8 787 aa10.44□□□□□ -0.74
APLF-202ENST00000394342 USP2O75604 605 aaPredicted RBP10.43□□□□□ -0.74
APLF-202ENST00000394342 BTDP43251 543 aa10.43□□□□□ -0.74
APLF-202ENST00000394342 PLCB2Q00722 1185 aa10.43□□□□□ -0.74
APLF-202ENST00000394342 PRKG1Q13976 671 aa10.43□□□□□ -0.74
APLF-202ENST00000394342 NAA16Q6N069 864 aaPredicted RBP10.43□□□□□ -0.74
APLF-202ENST00000394342 AIDAQ96BJ3 306 aa10.43□□□□□ -0.74
APLF-202ENST00000394342 IDI2Q9BXS1 227 aa10.43□□□□□ -0.74
APLF-202ENST00000394342 SSUH2Q9Y2M2 353 aa10.43□□□□□ -0.74
APLF-202ENST00000394342 DDX60LQ5H9U9 1706 aaKnown RBP10.43□□□□□ -0.74
APLF-202ENST00000394342 COL2A1P02458 1487 aaPredicted RBP10.42□□□□□ -0.74
APLF-202ENST00000394342 ENTPD3O75355 529 aa10.42□□□□□ -0.74
APLF-202ENST00000394342 NFIAQ12857 509 aa10.42□□□□□ -0.74
APLF-202ENST00000394342 TTF1Q15361 905 aaPredicted RBP10.42□□□□□ -0.74
APLF-202ENST00000394342 DCAF15Q66K64 600 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms