RNA–Protein interactions for RNA: ENST00000392481.6

RFC4-202, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFC4, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-202ENST00000392481 TMEM39BQ9GZU3 492 aa14.52□□□□□ -0.08
RFC4-202ENST00000392481 CCDC8Q9H0W5 538 aaPredicted RBP14.52□□□□□ -0.08
RFC4-202ENST00000392481 MYH2Q9UKX2 1941 aa14.52□□□□□ -0.09
RFC4-202ENST00000392481 GAKO14976 1311 aa14.52□□□□□ -0.09
RFC4-202ENST00000392481 UNCXA6NJT0 531 aa14.51□□□□□ -0.09
RFC4-202ENST00000392481 RHPN1Q8TCX5 695 aa14.51□□□□□ -0.09
RFC4-202ENST00000392481 KIF1BPQ96EK5 621 aa14.51□□□□□ -0.09
RFC4-202ENST00000392481 AKAP11Q9UKA4 1901 aa14.51□□□□□ -0.09
RFC4-202ENST00000392481 CA12O43570 354 aa14.5□□□□□ -0.09
RFC4-202ENST00000392481 RAB11FIP3O75154 756 aa14.5□□□□□ -0.09
RFC4-202ENST00000392481 IREB2P48200 963 aaKnown RBP14.5□□□□□ -0.09
RFC4-202ENST00000392481 KIF23Q02241 960 aaPredicted RBP14.5□□□□□ -0.09
RFC4-202ENST00000392481 MECOMQ03112 1051 aa14.5□□□□□ -0.09
RFC4-202ENST00000392481 TBC1D9Q6ZT07 1266 aa14.5□□□□□ -0.09
RFC4-202ENST00000392481 AACSQ86V21 672 aa14.5□□□□□ -0.09
RFC4-202ENST00000392481 USP40Q9NVE5 1235 aa14.5□□□□□ -0.09
RFC4-202ENST00000392481 TLR7Q9NYK1 1049 aaKnown RBP14.5□□□□□ -0.09
RFC4-202ENST00000392481 USP2O75604 605 aaPredicted RBP14.49□□□□□ -0.09
RFC4-202ENST00000392481 GSTO1P78417 241 aa14.49□□□□□ -0.09
RFC4-202ENST00000392481 CDAN1Q8IWY9 1227 aa14.49□□□□□ -0.09
RFC4-202ENST00000392481 REM2Q8IYK8 340 aaPredicted RBP14.49□□□□□ -0.09
RFC4-202ENST00000392481 CLASRPQ8N2M8 674 aaKnown RBP14.49□□□□□ -0.09
RFC4-202ENST00000392481 HOOK2Q96ED9 719 aa14.49□□□□□ -0.09
RFC4-202ENST00000392481 IL1RAPL2Q9NP60 686 aa14.49□□□□□ -0.09
RFC4-202ENST00000392481 SNRKQ9NRH2 765 aa14.49□□□□□ -0.09
RFC4-202ENST00000392481 LRP2BPQ9P2M1 347 aa14.49□□□□□ -0.09
RFC4-202ENST00000392481 FZD1Q9UP38 647 aa14.49□□□□□ -0.09
RFC4-202ENST00000392481 MROH7-TTC4A0A0A0MT08 1334 aa14.49□□□□□ -0.09
RFC4-202ENST00000392481 RPAP1Q9BWH6 1393 aaPredicted RBP14.49□□□□□ -0.09
RFC4-202ENST00000392481 APBB1O00213 710 aa14.49□□□□□ -0.09
RFC4-202ENST00000392481 IGSF3O75054 1194 aa14.49□□□□□ -0.09
RFC4-202ENST00000392481 LDHCP07864 332 aa14.49□□□□□ -0.09
RFC4-202ENST00000392481 ZNF384Q8TF68 577 aa14.49□□□□□ -0.09
RFC4-202ENST00000392481 FAM151AQ8WW52 585 aa14.49□□□□□ -0.09
RFC4-202ENST00000392481 NSUN4Q96CB9 384 aaKnown RBP14.49□□□□□ -0.09
RFC4-202ENST00000392481 SLC10A4Q96EP9 437 aa14.49□□□□□ -0.09
RFC4-202ENST00000392481 PRDM10Q9NQV6 1147 aa14.49□□□□□ -0.09
RFC4-202ENST00000392481 RAI14Q9P0K7 980 aa14.49□□□□□ -0.09
RFC4-202ENST00000392481 GPR75-ASB3A0A0A6YYF3 556 aa14.48□□□□□ -0.09
RFC4-202ENST00000392481 CYP2E1P05181 493 aaPredicted RBP14.48□□□□□ -0.09
RFC4-202ENST00000392481 HSPA8P11142 646 aaKnown RBP14.48□□□□□ -0.09
RFC4-202ENST00000392481 NFIAQ12857 509 aa14.48□□□□□ -0.09
RFC4-202ENST00000392481 ANKRD13AQ8IZ07 590 aa14.48□□□□□ -0.09
RFC4-202ENST00000392481 CSRNP1Q96S65 589 aa14.48□□□□□ -0.09
RFC4-202ENST00000392481 FAM198AQ9UFP1 575 aa14.48□□□□□ -0.09
RFC4-202ENST00000392481 MAP4K4O95819 1239 aaPredicted RBP14.47□□□□□ -0.09
RFC4-202ENST00000392481 BTDP43251 543 aa14.47□□□□□ -0.09
RFC4-202ENST00000392481 ZAP70P43403 619 aa14.47□□□□□ -0.09
RFC4-202ENST00000392481 LBX1P52954 281 aa14.47□□□□□ -0.09
RFC4-202ENST00000392481 TCP10Q12799 353 aa14.47□□□□□ -0.09
RFC4-202ENST00000392481 COL13A1Q5TAT6 717 aaPredicted RBP14.47□□□□□ -0.09
RFC4-202ENST00000392481 CLMNQ96JQ2 1002 aa14.47□□□□□ -0.09
RFC4-202ENST00000392481 IDI2Q9BXS1 227 aa14.47□□□□□ -0.09
RFC4-202ENST00000392481 ENTPD3O75355 529 aa14.46□□□□□ -0.09
RFC4-202ENST00000392481 IFIT2P09913 472 aaKnown RBP14.46□□□□□ -0.09
RFC4-202ENST00000392481 SPRYD7Q5W111 196 aa14.46□□□□□ -0.09
RFC4-202ENST00000392481 DCAF15Q66K64 600 aa14.46□□□□□ -0.09
RFC4-202ENST00000392481 AK9Q5TCS8 1911 aa14.45□□□□□ -0.1
RFC4-202ENST00000392481 RFX7Q2KHR2 1363 aa14.45□□□□□ -0.1
RFC4-202ENST00000392481 WDHD1O75717 1129 aaPredicted RBP14.45□□□□□ -0.1
RFC4-202ENST00000392481 ZBTB48P10074 688 aaPredicted RBP14.45□□□□□ -0.1
RFC4-202ENST00000392481 RGS3P49796 1198 aa14.45□□□□□ -0.1
RFC4-202ENST00000392481 RHBDL3P58872 404 aa14.45□□□□□ -0.1
RFC4-202ENST00000392481 MAP3K9P80192 1104 aa14.45□□□□□ -0.1
RFC4-202ENST00000392481 NAA16Q6N069 864 aaPredicted RBP14.45□□□□□ -0.1
RFC4-202ENST00000392481 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.45□□□□□ -0.15e-6■□□□□ 9.5
RFC4-202ENST00000392481 WNK4Q96J92 1243 aa14.45□□□□□ -0.1
RFC4-202ENST00000392481 LRRCC1Q9C099 1032 aa14.45□□□□□ -0.1
RFC4-202ENST00000392481 DCTPP1Q9H773 170 aa14.45□□□□□ -0.1
RFC4-202ENST00000392481 PIH1D3Q9NQM4 214 aaKnown RBP14.45□□□□□ -0.1
RFC4-202ENST00000392481 SAGE1Q9NXZ1 904 aa14.45□□□□□ -0.1
RFC4-202ENST00000392481 NPM3O75607 178 aaKnown RBP14.44□□□□□ -0.1
RFC4-202ENST00000392481 TM4SF4P48230 202 aa14.44□□□□□ -0.1
RFC4-202ENST00000392481 MKRN3Q13064 507 aaKnown RBP14.44□□□□□ -0.1
RFC4-202ENST00000392481 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.44□□□□□ -0.1
RFC4-202ENST00000392481 ZFPM1Q8IX07 1006 aa14.44□□□□□ -0.1
RFC4-202ENST00000392481 NOL10Q9BSC4 688 aaKnown RBP14.44□□□□□ -0.1
RFC4-202ENST00000392481 OTOFQ9HC10 1997 aa14.44□□□□□ -0.1
RFC4-202ENST00000392481 MYO5AQ9Y4I1 1855 aaKnown RBP14.44□□□□□ -0.1
RFC4-202ENST00000392481 SREBF2Q12772 1141 aa14.43□□□□□ -0.1
RFC4-202ENST00000392481 TMED8Q6PL24 325 aaPredicted RBP14.43□□□□□ -0.1
RFC4-202ENST00000392481 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.43□□□□□ -0.1
RFC4-202ENST00000392481 CRBNQ96SW2 442 aa14.43□□□□□ -0.1
RFC4-202ENST00000392481 ZNF341Q9BYN7 854 aa14.43□□□□□ -0.1
RFC4-202ENST00000392481 RNF186Q9NXI6 227 aa14.43□□□□□ -0.1
RFC4-202ENST00000392481 TSKSQ9UJT2 592 aa14.43□□□□□ -0.1
RFC4-202ENST00000392481 PCDHB15Q9Y5E8 787 aa14.43□□□□□ -0.1
RFC4-202ENST00000392481 CSADQ9Y600 493 aa14.43□□□□□ -0.1
RFC4-202ENST00000392481 MAST2Q6P0Q8 1798 aa14.43□□□□□ -0.1
RFC4-202ENST00000392481 MANSC4A6NHS7 340 aaPredicted RBP14.42□□□□□ -0.1
RFC4-202ENST00000392481 TRPA1O75762 1119 aa14.42□□□□□ -0.1
RFC4-202ENST00000392481 IDH1O75874 414 aaKnown RBP14.42□□□□□ -0.1
RFC4-202ENST00000392481 BAG3O95817 575 aa14.42□□□□□ -0.1
RFC4-202ENST00000392481 PLCG2P16885 1265 aa14.42□□□□□ -0.1
RFC4-202ENST00000392481 INHBEP58166 350 aa14.42□□□□□ -0.1
RFC4-202ENST00000392481 PPP4CP60510 307 aa14.42□□□□□ -0.1
RFC4-202ENST00000392481 VGLL4Q14135 290 aa14.42□□□□□ -0.1
RFC4-202ENST00000392481 TTF1Q15361 905 aaPredicted RBP14.42□□□□□ -0.1
RFC4-202ENST00000392481 MIGA2Q7L4E1 593 aa14.42□□□□□ -0.1
RFC4-202ENST00000392481 WRNIP1Q96S55 665 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms