RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 CDR2Q01850 454 aa16.44■□□□□ 0.22
CCDC50-201ENST00000392455 GLT8D2Q9H1C3 349 aa16.44■□□□□ 0.22
CCDC50-201ENST00000392455 AFG3L2Q9Y4W6 797 aa16.44■□□□□ 0.22
CCDC50-201ENST00000392455 NBPF5PQ86XG9 351 aaPredicted RBP16.44■□□□□ 0.22
CCDC50-201ENST00000392455 SYCE1Q8N0S2 351 aa16.44■□□□□ 0.22
CCDC50-201ENST00000392455 RBBP5Q15291 538 aaKnown RBP16.43■□□□□ 0.22
CCDC50-201ENST00000392455 WTAPQ15007 396 aa16.43■□□□□ 0.22
CCDC50-201ENST00000392455 SKILP12757 684 aa16.43■□□□□ 0.22
CCDC50-201ENST00000392455 DEUP1Q05D60 604 aa16.43■□□□□ 0.22
CCDC50-201ENST00000392455 IFNL2Q8IZJ0 200 aa16.43■□□□□ 0.22
CCDC50-201ENST00000392455 SLC12A2P55011 1212 aa16.43■□□□□ 0.22
CCDC50-201ENST00000392455 PDCD7Q8N8D1 485 aaKnown RBP16.43■□□□□ 0.22
CCDC50-201ENST00000392455 FAM200AQ8TCP9 573 aa16.43■□□□□ 0.22
CCDC50-201ENST00000392455 DKC1O60832 514 aaKnown RBP eCLIP16.42■□□□□ 0.22
CCDC50-201ENST00000392455 KLHL40Q2TBA0 621 aa16.42■□□□□ 0.22
CCDC50-201ENST00000392455 SMIM24O75264 130 aa16.42■□□□□ 0.22
CCDC50-201ENST00000392455 TRIM60Q495X7 471 aa16.42■□□□□ 0.22
CCDC50-201ENST00000392455 HEATR3Q7Z4Q2 680 aa16.42■□□□□ 0.22
CCDC50-201ENST00000392455 RTL9Q8NET4 1388 aa16.42■□□□□ 0.22
CCDC50-201ENST00000392455 AFMP43652 599 aa16.42■□□□□ 0.22
CCDC50-201ENST00000392455 SMTNP53814 917 aa16.42■□□□□ 0.22
CCDC50-201ENST00000392455 F8W031 263 aaPredicted RBP16.42■□□□□ 0.22
CCDC50-201ENST00000392455 PHEXP78562 749 aa16.42■□□□□ 0.22
CCDC50-201ENST00000392455 ANKRD20A3Q5VUR7 823 aa16.42■□□□□ 0.22
CCDC50-201ENST00000392455 PDXDC1Q6P996 788 aa16.42■□□□□ 0.22
CCDC50-201ENST00000392455 EP400NLQ6ZTU2 488 aa16.42■□□□□ 0.22
CCDC50-201ENST00000392455 HAUS1Q96CS2 278 aa16.42■□□□□ 0.22
CCDC50-201ENST00000392455 ZNF131P52739 623 aa16.42■□□□□ 0.22
CCDC50-201ENST00000392455 TBC1D2Q9BYX2 928 aa16.42■□□□□ 0.22
CCDC50-201ENST00000392455 DAAM1Q9Y4D1 1078 aa16.42■□□□□ 0.22
CCDC50-201ENST00000392455 SYT1P21579 422 aa16.41■□□□□ 0.22
CCDC50-201ENST00000392455 PHBP35232 272 aa16.41■□□□□ 0.22
CCDC50-201ENST00000392455 VTI1AQ96AJ9 217 aa16.41■□□□□ 0.22
CCDC50-201ENST00000392455 PI4KAP2A4QPH2 592 aa16.41■□□□□ 0.22
CCDC50-201ENST00000392455 GNA11P29992 359 aa16.41■□□□□ 0.22
CCDC50-201ENST00000392455 BRDTQ58F21 947 aaPredicted RBP16.41■□□□□ 0.22
CCDC50-201ENST00000392455 CCDC25Q86WR0 208 aa16.41■□□□□ 0.22
CCDC50-201ENST00000392455 PI4KAP1Q8N8J0 262 aa16.41■□□□□ 0.22
CCDC50-201ENST00000392455 XAB2Q9HCS7 855 aaKnown RBP16.41■□□□□ 0.22
CCDC50-201ENST00000392455 WDR70Q9NW82 654 aa16.41■□□□□ 0.22
CCDC50-201ENST00000392455 CCDC65Q8IXS2 484 aa16.41■□□□□ 0.22
CCDC50-201ENST00000392455 NDUFAB1O14561 156 aa16.41■□□□□ 0.22
CCDC50-201ENST00000392455 TRERF1Q96PN7 1200 aa16.41■□□□□ 0.22
CCDC50-201ENST00000392455 ESRRGP62508 458 aa16.41■□□□□ 0.22
CCDC50-201ENST00000392455 CHMP2AO43633 222 aa16.41■□□□□ 0.22
CCDC50-201ENST00000392455 PLCG2P16885 1265 aa16.41■□□□□ 0.22
CCDC50-201ENST00000392455 ABCC5O15440 1437 aa16.4■□□□□ 0.22
CCDC50-201ENST00000392455 EPB41P11171 864 aaKnown RBP16.4■□□□□ 0.22
CCDC50-201ENST00000392455 ATP6V0A1Q93050 837 aa16.4■□□□□ 0.22
CCDC50-201ENST00000392455 ZSWIM4Q9H7M6 989 aa16.4■□□□□ 0.22
CCDC50-201ENST00000392455 CTTNBP2NLQ9P2B4 639 aa16.4■□□□□ 0.22
CCDC50-201ENST00000392455 FAM83GA6ND36 823 aa16.4■□□□□ 0.22
CCDC50-201ENST00000392455 E9PMD0 336 aa16.4■□□□□ 0.22
CCDC50-201ENST00000392455 MUM1Q2TAK8 710 aa16.4■□□□□ 0.22
CCDC50-201ENST00000392455 RRAGBQ5VZM2 374 aa16.4■□□□□ 0.22
CCDC50-201ENST00000392455 ESR2Q92731 530 aa16.4■□□□□ 0.22
CCDC50-201ENST00000392455 DNAI1Q9UI46 699 aa16.4■□□□□ 0.22
CCDC50-201ENST00000392455 TROVE2P10155 538 aaKnown RBP eCLIP16.4■□□□□ 0.22
CCDC50-201ENST00000392455 PICALMQ13492 652 aa16.4■□□□□ 0.22
CCDC50-201ENST00000392455 UBE2Q2Q8WVN8 375 aa16.4■□□□□ 0.22
CCDC50-201ENST00000392455 SNRPA1P09661 255 aaKnown RBP16.39■□□□□ 0.21
CCDC50-201ENST00000392455 GABPAQ06546 454 aa16.39■□□□□ 0.21
CCDC50-201ENST00000392455 TTC22Q5TAA0 569 aa16.39■□□□□ 0.21
CCDC50-201ENST00000392455 VSIG1Q86XK7 387 aa16.39■□□□□ 0.21
CCDC50-201ENST00000392455 IPO11Q9UI26 975 aaKnown RBP16.39■□□□□ 0.21
CCDC50-201ENST00000392455 SLC4A4Q9Y6R1 1079 aa16.39■□□□□ 0.21
CCDC50-201ENST00000392455 NUP58Q9BVL2 599 aa16.39■□□□□ 0.21
CCDC50-201ENST00000392455 UQCRFS1P1P0C7P4 283 aa16.39■□□□□ 0.21
CCDC50-201ENST00000392455 CYP7A1P22680 504 aa16.39■□□□□ 0.21
CCDC50-201ENST00000392455 RAB17Q9H0T7 212 aa16.39■□□□□ 0.21
CCDC50-201ENST00000392455 MBIPQ9NS73 344 aa16.39■□□□□ 0.21
CCDC50-201ENST00000392455 A0A1B0GW55 424 aa16.39■□□□□ 0.21
CCDC50-201ENST00000392455 DUX4L2P0CJ85 424 aa16.39■□□□□ 0.21
CCDC50-201ENST00000392455 DUX4L3P0CJ86 424 aa16.39■□□□□ 0.21
CCDC50-201ENST00000392455 DUX4L4P0CJ87 422 aa16.39■□□□□ 0.21
CCDC50-201ENST00000392455 DUX4L5P0CJ88 424 aa16.39■□□□□ 0.21
CCDC50-201ENST00000392455 DUX4L6P0CJ89 424 aa16.39■□□□□ 0.21
CCDC50-201ENST00000392455 DUX4L7P0CJ90 424 aa16.39■□□□□ 0.21
CCDC50-201ENST00000392455 GNAT2P19087 354 aa16.39■□□□□ 0.21
CCDC50-201ENST00000392455 GRM1Q13255 1194 aa16.39■□□□□ 0.21
CCDC50-201ENST00000392455 PLS1Q14651 629 aa16.39■□□□□ 0.21
CCDC50-201ENST00000392455 DUX4Q9UBX2 424 aa16.39■□□□□ 0.21
CCDC50-201ENST00000392455 NUCKS1Q9H1E3 243 aaKnown RBP16.39■□□□□ 0.21
CCDC50-201ENST00000392455 ZHX1Q9UKY1 873 aaPredicted RBP16.39■□□□□ 0.21
CCDC50-201ENST00000392455 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.39■□□□□ 0.21
CCDC50-201ENST00000392455 AP1ARQ63HQ0 302 aa16.39■□□□□ 0.21
CCDC50-201ENST00000392455 PLCD3Q8N3E9 789 aa16.39■□□□□ 0.21
CCDC50-201ENST00000392455 KLF18A0A0U1RQI7 1052 aa16.39■□□□□ 0.21
CCDC50-201ENST00000392455 TEKT1Q969V4 418 aa16.39■□□□□ 0.21
CCDC50-201ENST00000392455 FAF1Q9UNN5 650 aaPredicted RBP16.39■□□□□ 0.21
CCDC50-201ENST00000392455 PPP2R5DQ14738 602 aa16.38■□□□□ 0.21
CCDC50-201ENST00000392455 SETDB2Q96T68 719 aa16.38■□□□□ 0.21
CCDC50-201ENST00000392455 DAPK3O43293 454 aa16.38■□□□□ 0.21
CCDC50-201ENST00000392455 EFCAB14O75071 495 aa16.38■□□□□ 0.21
CCDC50-201ENST00000392455 TRIM42Q8IWZ5 723 aa16.38■□□□□ 0.21
CCDC50-201ENST00000392455 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.38■□□□□ 0.21
CCDC50-201ENST00000392455 CCDC93Q567U6 631 aa16.38■□□□□ 0.21
CCDC50-201ENST00000392455 UTP14CQ5TAP6 766 aaKnown RBP16.38■□□□□ 0.21
CCDC50-201ENST00000392455 PPANQ9NQ55 473 aaKnown RBP16.38■□□□□ 0.21
CCDC50-201ENST00000392455 ZBTB43O43298 467 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms