RNA–Protein interactions for RNA: ENST00000390468.1

TRAV41-201, Transcript of T cell receptor alpha variable 41, humanhuman

APPRIS P1 BASIC

Gene TRAV41, Length 336 nt, Biotype TR V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41-201ENST00000390468 ANKRD36BQ8N2N9 1353 aa3.26□□□□□ -1.89
TRAV41-201ENST00000390468 PARD3Q8TEW0 1356 aa3.26□□□□□ -1.89
TRAV41-201ENST00000390468 ABCC11Q96J66 1382 aa3.26□□□□□ -1.89
TRAV41-201ENST00000390468 PLEKHH1Q9ULM0 1364 aa3.26□□□□□ -1.89
TRAV41-201ENST00000390468 MYBBP1AQ9BQG0 1328 aaKnown RBP3.26□□□□□ -1.89
TRAV41-201ENST00000390468 CCDC66A2RUB6 948 aa3.26□□□□□ -1.89
TRAV41-201ENST00000390468 BTBD11A6QL63 1104 aa3.26□□□□□ -1.89
TRAV41-201ENST00000390468 USP17L5A8MUK1 530 aa3.26□□□□□ -1.89
TRAV41-201ENST00000390468 PPP1R12BO60237 982 aaPredicted RBP3.26□□□□□ -1.89
TRAV41-201ENST00000390468 LGR5O75473 907 aa3.26□□□□□ -1.89
TRAV41-201ENST00000390468 RGS9O75916 674 aaPredicted RBP3.26□□□□□ -1.89
TRAV41-201ENST00000390468 H2AFB1P0C5Y9 115 aa3.26□□□□□ -1.89
TRAV41-201ENST00000390468 H2AFB2P0C5Z0 115 aa3.26□□□□□ -1.89
TRAV41-201ENST00000390468 CPB1P15086 417 aa3.26□□□□□ -1.89
TRAV41-201ENST00000390468 CALRP27797 417 aaKnown RBP3.26□□□□□ -1.89
TRAV41-201ENST00000390468 IREB2P48200 963 aaKnown RBP3.26□□□□□ -1.89
TRAV41-201ENST00000390468 PSMA6P60900 246 aaKnown RBP3.26□□□□□ -1.89
TRAV41-201ENST00000390468 MLLT1Q03111 559 aaPredicted RBP3.26□□□□□ -1.89
TRAV41-201ENST00000390468 TYRO3Q06418 890 aa3.26□□□□□ -1.89
TRAV41-201ENST00000390468 RALBP1Q15311 655 aa3.26□□□□□ -1.89
TRAV41-201ENST00000390468 KRT25Q7Z3Z0 450 aa3.26□□□□□ -1.89
TRAV41-201ENST00000390468 ANKLE2Q86XL3 938 aa3.26□□□□□ -1.89
TRAV41-201ENST00000390468 FMR1NBQ8N0W7 255 aaPredicted RBP3.26□□□□□ -1.89
TRAV41-201ENST00000390468 LENG1Q96BZ8 264 aaPredicted RBP3.26□□□□□ -1.89
TRAV41-201ENST00000390468 SUSD3Q96L08 255 aa3.26□□□□□ -1.89
TRAV41-201ENST00000390468 PUS7Q96PZ0 661 aaKnown RBP3.26□□□□□ -1.89
TRAV41-201ENST00000390468 YY1AP1Q9H869 796 aa3.26□□□□□ -1.89
TRAV41-201ENST00000390468 PANK3Q9H999 370 aa3.26□□□□□ -1.89
TRAV41-201ENST00000390468 MRS2Q9HD23 443 aa3.26□□□□□ -1.89
TRAV41-201ENST00000390468 RRAGDQ9NQL2 400 aaPredicted RBP3.26□□□□□ -1.89
TRAV41-201ENST00000390468 PCMTD2Q9NV79 361 aa3.26□□□□□ -1.89
TRAV41-201ENST00000390468 DNAJB12Q9NXW2 375 aaKnown RBP3.26□□□□□ -1.89
TRAV41-201ENST00000390468 ANKIB1Q9P2G1 1089 aa3.26□□□□□ -1.89
TRAV41-201ENST00000390468 ABCA3Q99758 1704 aa3.26□□□□□ -1.89
TRAV41-201ENST00000390468 CRYBG1Q9Y4K1 1723 aa3.26□□□□□ -1.89
TRAV41-201ENST00000390468 NKTRP30414 1462 aaKnown RBP3.26□□□□□ -1.89
TRAV41-201ENST00000390468 LMTK3Q96Q04 1460 aa3.26□□□□□ -1.89
TRAV41-201ENST00000390468 FAM208AQ9UK61 1670 aaKnown RBP3.26□□□□□ -1.89
TRAV41-201ENST00000390468 PPIP5K1Q6PFW1 1433 aa3.26□□□□□ -1.89
TRAV41-201ENST00000390468 PTPRUQ92729 1446 aa3.26□□□□□ -1.89
TRAV41-201ENST00000390468 PHRF1Q9P1Y6 1649 aaKnown RBP3.26□□□□□ -1.89
TRAV41-201ENST00000390468 A0A1W2PP64 1363 aa3.25□□□□□ -1.89
TRAV41-201ENST00000390468 BRD4O60885 1362 aaPredicted RBP3.25□□□□□ -1.89
TRAV41-201ENST00000390468 ALS2Q96Q42 1657 aa3.25□□□□□ -1.89
TRAV41-201ENST00000390468 NFKB1P19838 968 aa3.25□□□□□ -1.89
TRAV41-201ENST00000390468 SSTR4P31391 388 aa3.25□□□□□ -1.89
TRAV41-201ENST00000390468 SOX11P35716 441 aa3.25□□□□□ -1.89
TRAV41-201ENST00000390468 MMP14P50281 582 aa3.25□□□□□ -1.89
TRAV41-201ENST00000390468 AFF1P51825 1210 aaKnown RBP3.25□□□□□ -1.89
TRAV41-201ENST00000390468 EPHA4P54764 986 aa3.25□□□□□ -1.89
TRAV41-201ENST00000390468 CCDC102BQ68D86 513 aa3.25□□□□□ -1.89
TRAV41-201ENST00000390468 HDGFL2Q7Z4V5 671 aaPredicted RBP3.25□□□□□ -1.89
TRAV41-201ENST00000390468 WAPLQ7Z5K2 1190 aa3.25□□□□□ -1.89
TRAV41-201ENST00000390468 FAM35AQ86V20 835 aa3.25□□□□□ -1.89
TRAV41-201ENST00000390468 TSEN2Q8NCE0 465 aaKnown RBP3.25□□□□□ -1.89
TRAV41-201ENST00000390468 ZNF594Q96JF6 807 aaPredicted RBP3.25□□□□□ -1.89
TRAV41-201ENST00000390468 CALR3Q96L12 384 aaKnown RBP3.25□□□□□ -1.89
TRAV41-201ENST00000390468 ZNF830Q96NB3 372 aaPredicted RBP3.25□□□□□ -1.89
TRAV41-201ENST00000390468 SLC26A8Q96RN1 970 aa3.25□□□□□ -1.89
TRAV41-201ENST00000390468 CDK19Q9BWU1 502 aa3.25□□□□□ -1.89
TRAV41-201ENST00000390468 PRDM10Q9NQV6 1147 aa3.25□□□□□ -1.89
TRAV41-201ENST00000390468 TMEM51Q9NW97 253 aa3.25□□□□□ -1.89
TRAV41-201ENST00000390468 NAGPAQ9UK23 515 aa3.25□□□□□ -1.89
TRAV41-201ENST00000390468 KIAA1024Q9UPX6 916 aa3.25□□□□□ -1.89
TRAV41-201ENST00000390468 TBX22Q9Y458 520 aa3.25□□□□□ -1.89
TRAV41-201ENST00000390468 NSD2O96028 1365 aa3.25□□□□□ -1.89
TRAV41-201ENST00000390468 ROBO2Q9HCK4 1378 aa3.25□□□□□ -1.89
TRAV41-201ENST00000390468 NPC1L1Q9UHC9 1359 aa3.25□□□□□ -1.89
TRAV41-201ENST00000390468 LRRC7Q96NW7 1537 aa3.24□□□□□ -1.89
TRAV41-201ENST00000390468 CGNL1Q0VF96 1302 aa3.24□□□□□ -1.89
TRAV41-201ENST00000390468 WNK3Q9BYP7 1800 aa3.24□□□□□ -1.89
TRAV41-201ENST00000390468 CD163L1Q9NR16 1453 aa3.24□□□□□ -1.89
TRAV41-201ENST00000390468 NHSL1Q5SYE7 1610 aa3.24□□□□□ -1.89
TRAV41-201ENST00000390468 VGLL3A8MV65 326 aa3.24□□□□□ -1.89
TRAV41-201ENST00000390468 MSNP26038 577 aaKnown RBP3.24□□□□□ -1.89
TRAV41-201ENST00000390468 B4GALNT3Q6L9W6 998 aa3.24□□□□□ -1.89
TRAV41-201ENST00000390468 KIAA1211Q6ZU35 1233 aa3.24□□□□□ -1.89
TRAV41-201ENST00000390468 BTLAQ7Z6A9 289 aa3.24□□□□□ -1.89
TRAV41-201ENST00000390468 ALDH16A1Q8IZ83 802 aa3.24□□□□□ -1.89
TRAV41-201ENST00000390468 FAM9BQ8IZU0 186 aa3.24□□□□□ -1.89
TRAV41-201ENST00000390468 GAS2L2Q8NHY3 880 aa3.24□□□□□ -1.89
TRAV41-201ENST00000390468 C7orf43Q8WVR3 580 aa3.24□□□□□ -1.89
TRAV41-201ENST00000390468 WFDC12Q8WWY7 111 aa3.24□□□□□ -1.89
TRAV41-201ENST00000390468 CCDC94Q9BW85 323 aaPredicted RBP3.24□□□□□ -1.89
TRAV41-201ENST00000390468 TRAIPQ9BWF2 469 aa3.24□□□□□ -1.89
TRAV41-201ENST00000390468 GEMIN8Q9NWZ8 242 aaKnown RBP3.24□□□□□ -1.89
TRAV41-201ENST00000390468 TERF2IPQ9NYB0 399 aa3.24□□□□□ -1.89
TRAV41-201ENST00000390468 AMOTL2Q9Y2J4 779 aa3.24□□□□□ -1.89
TRAV41-201ENST00000390468 GPC6Q9Y625 555 aaPredicted RBP3.24□□□□□ -1.89
TRAV41-201ENST00000390468 ANKARQ7Z5J8 1434 aa3.24□□□□□ -1.89
TRAV41-201ENST00000390468 ADGRL3Q9HAR2 1447 aa3.24□□□□□ -1.89
TRAV41-201ENST00000390468 RGPD1P0DJD0 1748 aa3.24□□□□□ -1.89
TRAV41-201ENST00000390468 PEAK1Q9H792 1746 aa3.24□□□□□ -1.89
TRAV41-201ENST00000390468 DYNC1I1O14576 645 aa3.23□□□□□ -1.89
TRAV41-201ENST00000390468 PHLPP1O60346 1717 aa3.23□□□□□ -1.89
TRAV41-201ENST00000390468 RASA1P20936 1047 aa3.23□□□□□ -1.89
TRAV41-201ENST00000390468 NOS3P29474 1203 aa3.23□□□□□ -1.89
TRAV41-201ENST00000390468 SSR1P43307 286 aaKnown RBP3.23□□□□□ -1.89
TRAV41-201ENST00000390468 MRE11P49959 708 aa3.23□□□□□ -1.89
TRAV41-201ENST00000390468 HNRNPUQ00839 825 aaKnown RBP eCLIP3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms