RNA–Protein interactions for RNA: ENST00000382096.5

VLDLR-201, Transcript of very low density lipoprotein receptor, humanhuman

TSL 5

Gene VLDLR, Length 736 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-201ENST00000382096 BTBD19C9JJ37 291 aa28.37■■■□□ 2.13
VLDLR-201ENST00000382096 IRF6O14896 467 aa28.37■■■□□ 2.13
VLDLR-201ENST00000382096 LACTBP83111 547 aaPredicted RBP28.37■■■□□ 2.13
VLDLR-201ENST00000382096 PPIL2Q13356 520 aa28.37■■■□□ 2.13
VLDLR-201ENST00000382096 SNAPC2Q13487 334 aa28.37■■■□□ 2.13
VLDLR-201ENST00000382096 HHIPL2Q6UWX4 724 aa28.37■■■□□ 2.13
VLDLR-201ENST00000382096 SMC4Q9NTJ3 1288 aa28.37■■■□□ 2.13
VLDLR-201ENST00000382096 GNRH1P01148 92 aa28.35■■■□□ 2.13
VLDLR-201ENST00000382096 FGFR2P21802 821 aa28.35■■■□□ 2.13
VLDLR-201ENST00000382096 KIF22Q14807 665 aa28.35■■■□□ 2.13
VLDLR-201ENST00000382096 PUM3Q15397 648 aaKnown RBP28.35■■■□□ 2.13
VLDLR-201ENST00000382096 DCAF15Q66K64 600 aa28.35■■■□□ 2.13
VLDLR-201ENST00000382096 KLHDC4Q8TBB5 520 aa28.35■■■□□ 2.13
VLDLR-201ENST00000382096 ARHGAP39Q9C0H5 1083 aa28.35■■■□□ 2.13
VLDLR-201ENST00000382096 SLC4A8Q2Y0W8 1093 aa28.34■■■□□ 2.13
VLDLR-201ENST00000382096 IFIT1P09914 478 aaKnown RBP28.33■■■□□ 2.13
VLDLR-201ENST00000382096 RFX5P48382 616 aaPredicted RBP28.33■■■□□ 2.13
VLDLR-201ENST00000382096 PPATQ06203 517 aa28.32■■■□□ 2.12
VLDLR-201ENST00000382096 ZNF341Q9BYN7 854 aa28.32■■■□□ 2.12
VLDLR-201ENST00000382096 DOCK2Q92608 1830 aa28.32■■■□□ 2.12
VLDLR-201ENST00000382096 MGAMO43451 1857 aa28.32■■■□□ 2.12
VLDLR-201ENST00000382096 PRMT2P55345 433 aa28.31■■■□□ 2.12
VLDLR-201ENST00000382096 SH3TC2Q8TF17 1288 aa28.31■■■□□ 2.12
VLDLR-201ENST00000382096 WDR66Q8TBY9 1149 aa28.3■■■□□ 2.12
VLDLR-201ENST00000382096 INPP5BP32019 993 aa28.29■■■□□ 2.12
VLDLR-201ENST00000382096 FXR1P51114 621 aaKnown RBP eCLIP28.29■■■□□ 2.12
VLDLR-201ENST00000382096 C17orf99Q6UX52 265 aa28.29■■■□□ 2.12
VLDLR-201ENST00000382096 MIGA2Q7L4E1 593 aa28.29■■■□□ 2.12
VLDLR-201ENST00000382096 FAM151AQ8WW52 585 aa28.29■■■□□ 2.12
VLDLR-201ENST00000382096 NOB1Q9ULX3 412 aaKnown RBP28.29■■■□□ 2.12
VLDLR-201ENST00000382096 EYA2O00167 538 aa28.28■■■□□ 2.12
VLDLR-201ENST00000382096 ANKRD23Q86SG2 305 aa28.28■■■□□ 2.12
VLDLR-201ENST00000382096 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.28■■■□□ 2.12
VLDLR-201ENST00000382096 LPIN2Q92539 896 aa28.28■■■□□ 2.12
VLDLR-201ENST00000382096 ZNF112Q9UJU3 913 aa28.28■■■□□ 2.12
VLDLR-201ENST00000382096 KCNH4Q9UQ05 1017 aa28.28■■■□□ 2.12
VLDLR-201ENST00000382096 MYH2Q9UKX2 1941 aa28.28■■■□□ 2.12
VLDLR-201ENST00000382096 ADGRA2Q96PE1 1338 aa28.27■■■□□ 2.12
VLDLR-201ENST00000382096 MYCP01106 439 aaPredicted RBP28.27■■■□□ 2.12
VLDLR-201ENST00000382096 SLC5A1P13866 664 aa28.27■■■□□ 2.12
VLDLR-201ENST00000382096 API5Q9BZZ5 524 aaKnown RBP28.27■■■□□ 2.12
VLDLR-201ENST00000382096 DAGLAQ9Y4D2 1042 aa28.27■■■□□ 2.12
VLDLR-201ENST00000382096 FBXO3Q9UK99 471 aa28.26■■■□□ 2.11
VLDLR-201ENST00000382096 PTPRFP10586 1907 aa28.26■■■□□ 2.11
VLDLR-201ENST00000382096 UBTFL1P0CB47 393 aaPredicted RBP28.25■■■□□ 2.11
VLDLR-201ENST00000382096 CTGFP29279 349 aa28.25■■■□□ 2.11
VLDLR-201ENST00000382096 CDC42EP5Q6NZY7 148 aa28.25■■■□□ 2.11
VLDLR-201ENST00000382096 ATG9AQ7Z3C6 839 aa28.25■■■□□ 2.11
VLDLR-201ENST00000382096 TRIOBPQ9H2D6 2365 aa28.25■■■□□ 2.11
VLDLR-201ENST00000382096 PDHXO00330 501 aa28.24■■■□□ 2.11
VLDLR-201ENST00000382096 RARSP54136 660 aaKnown RBP28.24■■■□□ 2.11
VLDLR-201ENST00000382096 NOL9Q5SY16 702 aaKnown RBP28.24■■■□□ 2.11
VLDLR-201ENST00000382096 TRIM47Q96LD4 638 aa28.24■■■□□ 2.11
VLDLR-201ENST00000382096 SRRDQ9UH36 339 aa28.24■■■□□ 2.11
VLDLR-201ENST00000382096 CPA4Q9UI42 421 aa28.24■■■□□ 2.11
VLDLR-201ENST00000382096 COLQQ9Y215 455 aaPredicted RBP28.24■■■□□ 2.11
VLDLR-201ENST00000382096 PSMC4P43686 418 aa28.23■■■□□ 2.11
VLDLR-201ENST00000382096 TCP10Q12799 353 aa28.23■■■□□ 2.11
VLDLR-201ENST00000382096 MOGSQ13724 837 aa28.23■■■□□ 2.11
VLDLR-201ENST00000382096 DIXDC1Q155Q3 683 aa28.23■■■□□ 2.11
VLDLR-201ENST00000382096 CIAO1O76071 339 aa28.22■■■□□ 2.11
VLDLR-201ENST00000382096 PRDX5P30044 214 aa28.22■■■□□ 2.11
VLDLR-201ENST00000382096 NFIAQ12857 509 aa28.22■■■□□ 2.11
VLDLR-201ENST00000382096 ARHGAP45Q92619 1136 aa28.22■■■□□ 2.11
VLDLR-201ENST00000382096 RANBP2P49792 3224 aaKnown RBP28.21■■■□□ 2.11
VLDLR-201ENST00000382096 SHISA4Q96DD7 197 aa28.21■■■□□ 2.11
VLDLR-201ENST00000382096 FAM198AQ9UFP1 575 aa28.21■■■□□ 2.11
VLDLR-201ENST00000382096 HDAC5Q9UQL6 1122 aa28.21■■■□□ 2.11
VLDLR-201ENST00000382096 SALL1Q9NSC2 1324 aa28.2■■■□□ 2.11
VLDLR-201ENST00000382096 PHIPQ8WWQ0 1821 aa28.2■■■□□ 2.11
VLDLR-201ENST00000382096 H0YGN5 161 aa28.2■■■□□ 2.1
VLDLR-201ENST00000382096 OSBPP22059 807 aa28.2■■■□□ 2.1
VLDLR-201ENST00000382096 HOXD10P28358 340 aa28.2■■■□□ 2.1
VLDLR-201ENST00000382096 MTFR1Q15390 333 aa28.2■■■□□ 2.1
VLDLR-201ENST00000382096 DOCK1Q14185 1865 aa28.2■■■□□ 2.1
VLDLR-201ENST00000382096 SZT2Q5T011 3432 aa28.2■■■□□ 2.1
VLDLR-201ENST00000382096 ATRNL1Q5VV63 1379 aa28.19■■■□□ 2.1
VLDLR-201ENST00000382096 ECM2O94769 699 aaPredicted RBP28.18■■■□□ 2.1
VLDLR-201ENST00000382096 LDHBP07195 334 aaKnown RBP28.18■■■□□ 2.1
VLDLR-201ENST00000382096 GRK4P32298 578 aa28.18■■■□□ 2.1
VLDLR-201ENST00000382096 ATP2B3Q16720 1220 aa28.18■■■□□ 2.1
VLDLR-201ENST00000382096 LRRFIP2Q9Y608 721 aaKnown RBP28.18■■■□□ 2.1
VLDLR-201ENST00000382096 FMNL1O95466 1100 aaPredicted RBP28.17■■■□□ 2.1
VLDLR-201ENST00000382096 RAET1EQ8TD07 263 aa28.17■■■□□ 2.1
VLDLR-201ENST00000382096 PARK7Q99497 189 aaKnown RBP28.17■■■□□ 2.1
VLDLR-201ENST00000382096 MEIS3Q99687 375 aa28.17■■■□□ 2.1
VLDLR-201ENST00000382096 USP40Q9NVE5 1235 aa28.17■■■□□ 2.1
VLDLR-201ENST00000382096 GNL3LQ9NVN8 582 aaKnown RBP28.17■■■□□ 2.1
VLDLR-201ENST00000382096 MYPNQ86TC9 1320 aa28.17■■■□□ 2.1
VLDLR-201ENST00000382096 CXCL11O14625 94 aa28.16■■■□□ 2.1
VLDLR-201ENST00000382096 SEMA3EO15041 775 aa28.16■■■□□ 2.1
VLDLR-201ENST00000382096 ZBTB22O15209 634 aa28.16■■■□□ 2.1
VLDLR-201ENST00000382096 BCRP11274 1271 aa28.16■■■□□ 2.1
VLDLR-201ENST00000382096 GPAT2Q6NUI2 795 aa28.16■■■□□ 2.1
VLDLR-201ENST00000382096 NKX2-3Q8TAU0 364 aa28.16■■■□□ 2.1
VLDLR-201ENST00000382096 COPRSQ9NQ92 184 aa28.16■■■□□ 2.1
VLDLR-201ENST00000382096 RFX7Q2KHR2 1363 aa28.15■■■□□ 2.1
VLDLR-201ENST00000382096 IL15P40933 162 aaPredicted RBP28.15■■■□□ 2.1
VLDLR-201ENST00000382096 ZFPM1Q8IX07 1006 aa28.15■■■□□ 2.1
VLDLR-201ENST00000382096 SIL1Q9H173 461 aa28.15■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms