RNA–Protein interactions for RNA: ENST00000379937.6

BRF1-203, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-203ENST00000379937 V9GYY5 206 aaPredicted RBP18.18■□□□□ 0.5
BRF1-203ENST00000379937 HOMER1Q86YM7 354 aa18.17■□□□□ 0.5
BRF1-203ENST00000379937 AOPEPQ8N6M6 819 aa18.17■□□□□ 0.5
BRF1-203ENST00000379937 PCDHA7Q9UN72 937 aa18.17■□□□□ 0.5
BRF1-203ENST00000379937 CLCN1P35523 988 aa18.17■□□□□ 0.5
BRF1-203ENST00000379937 GRIK5Q16478 980 aa18.17■□□□□ 0.5
BRF1-203ENST00000379937 STRBPQ96SI9 672 aaKnown RBP18.17■□□□□ 0.5
BRF1-203ENST00000379937 DSCC1Q9BVC3 393 aa18.17■□□□□ 0.5
BRF1-203ENST00000379937 SCAND2PQ9GZW5 306 aaPredicted RBP18.17■□□□□ 0.5
BRF1-203ENST00000379937 PFKFB2O60825 505 aa18.16■□□□□ 0.5
BRF1-203ENST00000379937 OXER1Q8TDS5 423 aa18.16■□□□□ 0.5
BRF1-203ENST00000379937 ERICH2A1L162 156 aa18.16■□□□□ 0.5
BRF1-203ENST00000379937 TOM1O60784 492 aa18.16■□□□□ 0.5
BRF1-203ENST00000379937 TRIM29Q14134 588 aa18.16■□□□□ 0.5
BRF1-203ENST00000379937 NAA16Q6N069 864 aaPredicted RBP18.16■□□□□ 0.5
BRF1-203ENST00000379937 CLEC10AQ8IUN9 316 aa18.16■□□□□ 0.5
BRF1-203ENST00000379937 RASGRP4Q8TDF6 673 aa18.16■□□□□ 0.5
BRF1-203ENST00000379937 CAVIN4Q5BKX8 364 aa18.16■□□□□ 0.5
BRF1-203ENST00000379937 CLEC17AQ6ZS10 378 aa18.16■□□□□ 0.5
BRF1-203ENST00000379937 NLRP3Q96P20 1036 aa18.16■□□□□ 0.5
BRF1-203ENST00000379937 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.16■□□□□ 0.5
BRF1-203ENST00000379937 CARMIL3Q8ND23 1372 aa18.16■□□□□ 0.5
BRF1-203ENST00000379937 EXOSC10Q01780 885 aaKnown RBP18.15■□□□□ 0.5
BRF1-203ENST00000379937 KLHL34Q8N239 644 aa18.15■□□□□ 0.5
BRF1-203ENST00000379937 ARHGEF1Q92888 912 aaKnown RBP18.15■□□□□ 0.5
BRF1-203ENST00000379937 USP17L8P0C7I0 530 aa18.15■□□□□ 0.5
BRF1-203ENST00000379937 AFMP43652 599 aa18.15■□□□□ 0.5
BRF1-203ENST00000379937 KRT40Q6A162 431 aa18.15■□□□□ 0.5
BRF1-203ENST00000379937 ILDR1Q86SU0 546 aaPredicted RBP18.15■□□□□ 0.5
BRF1-203ENST00000379937 ZNF34Q8IZ26 560 aa18.15■□□□□ 0.5
BRF1-203ENST00000379937 MCM9Q9NXL9 1143 aa18.15■□□□□ 0.5
BRF1-203ENST00000379937 ANGEL1Q9UNK9 670 aaKnown RBP18.15■□□□□ 0.5
BRF1-203ENST00000379937 HPS5Q9UPZ3 1129 aa18.15■□□□□ 0.5
BRF1-203ENST00000379937 MAPK8IP1Q9UQF2 711 aa18.15■□□□□ 0.5
BRF1-203ENST00000379937 CABP5Q9NP86 173 aa18.15■□□□□ 0.5
BRF1-203ENST00000379937 V9GY48 417 aaPredicted RBP18.15■□□□□ 0.5
BRF1-203ENST00000379937 CSPP1Q1MSJ5 1256 aa18.14■□□□□ 0.49
BRF1-203ENST00000379937 MAPKAPK5Q8IW41 473 aa18.14■□□□□ 0.49
BRF1-203ENST00000379937 RTCBQ9Y3I0 505 aaKnown RBP18.14■□□□□ 0.49
BRF1-203ENST00000379937 MAGEB6P1A0A0J9YX57 407 aa18.14■□□□□ 0.49
BRF1-203ENST00000379937 GSG1L2A8MUP6 293 aa18.14■□□□□ 0.49
BRF1-203ENST00000379937 APOA5Q6Q788 366 aa18.14■□□□□ 0.49
BRF1-203ENST00000379937 AK7Q96M32 723 aa18.14■□□□□ 0.49
BRF1-203ENST00000379937 PPP1R1BQ9UD71 204 aaPredicted RBP18.14■□□□□ 0.49
BRF1-203ENST00000379937 MINPP1Q9UNW1 487 aa18.14■□□□□ 0.49
BRF1-203ENST00000379937 WTAPQ15007 396 aa18.13■□□□□ 0.49
BRF1-203ENST00000379937 USP49Q70CQ1 688 aa18.13■□□□□ 0.49
BRF1-203ENST00000379937 DZIP1Q86YF9 867 aaKnown RBP18.13■□□□□ 0.49
BRF1-203ENST00000379937 LRRC37A3O60309 1634 aa18.13■□□□□ 0.49
BRF1-203ENST00000379937 CIAO1O76071 339 aa18.13■□□□□ 0.49
BRF1-203ENST00000379937 TRMT44Q8IYL2 757 aaKnown RBP18.13■□□□□ 0.49
BRF1-203ENST00000379937 CFAP45Q9UL16 551 aa18.13■□□□□ 0.49
BRF1-203ENST00000379937 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.13■□□□□ 0.49
BRF1-203ENST00000379937 STX17P56962 302 aa18.13■□□□□ 0.49
BRF1-203ENST00000379937 RPS8P62241 208 aaKnown RBP18.13■□□□□ 0.49
BRF1-203ENST00000379937 AKAP17AQ02040 695 aaKnown RBP18.13■□□□□ 0.49
BRF1-203ENST00000379937 PNOCQ13519 176 aa18.13■□□□□ 0.49
BRF1-203ENST00000379937 LRRFIP1Q32MZ4 808 aaKnown RBP18.13■□□□□ 0.49
BRF1-203ENST00000379937 PES1O00541 588 aaKnown RBP18.12■□□□□ 0.49
BRF1-203ENST00000379937 PLEKHA8P1O95397 391 aa18.12■□□□□ 0.49
BRF1-203ENST00000379937 NTSR2O95665 410 aa18.12■□□□□ 0.49
BRF1-203ENST00000379937 MB21D2Q8IYB1 491 aaPredicted RBP18.12■□□□□ 0.49
BRF1-203ENST00000379937 RASSF8Q8NHQ8 419 aa18.12■□□□□ 0.49
BRF1-203ENST00000379937 UQCRHLA0A096LP55 91 aa18.12■□□□□ 0.49
BRF1-203ENST00000379937 UQCRHP07919 91 aa18.12■□□□□ 0.49
BRF1-203ENST00000379937 USP5P45974 858 aa18.12■□□□□ 0.49
BRF1-203ENST00000379937 CACNB3P54284 484 aa18.12■□□□□ 0.49
BRF1-203ENST00000379937 CDC5LQ99459 802 aaKnown RBP18.12■□□□□ 0.49
BRF1-203ENST00000379937 BCL9O00512 1426 aa18.12■□□□□ 0.49
BRF1-203ENST00000379937 DPCR1Q3MIW9 517 aa18.11■□□□□ 0.49
BRF1-203ENST00000379937 GPKOWQ92917 476 aaPredicted RBP eCLIP18.11■□□□□ 0.49
BRF1-203ENST00000379937 NACAP1Q9BZK3 213 aa18.11■□□□□ 0.49
BRF1-203ENST00000379937 FAM196BA6NMK8 535 aa18.11■□□□□ 0.49
BRF1-203ENST00000379937 SPTLC2O15270 562 aa18.11■□□□□ 0.49
BRF1-203ENST00000379937 HMGB1P09429 215 aaKnown RBP18.11■□□□□ 0.49
BRF1-203ENST00000379937 DOK7Q18PE1 504 aa18.11■□□□□ 0.49
BRF1-203ENST00000379937 ZKSCAN5Q9Y2L8 839 aa18.11■□□□□ 0.49
BRF1-203ENST00000379937 ZNF174Q15697 407 aa18.11■□□□□ 0.49
BRF1-203ENST00000379937 TRMT1LQ7Z2T5 733 aaKnown RBP18.11■□□□□ 0.49
BRF1-203ENST00000379937 SMYD4Q8IYR2 804 aaPredicted RBP18.11■□□□□ 0.49
BRF1-203ENST00000379937 VGLL2Q8N8G2 317 aa18.11■□□□□ 0.49
BRF1-203ENST00000379937 ZNF652Q9Y2D9 606 aa18.11■□□□□ 0.49
BRF1-203ENST00000379937 TSPY2A6NKD2 308 aa18.1■□□□□ 0.49
BRF1-203ENST00000379937 WDHD1O75717 1129 aaPredicted RBP18.1■□□□□ 0.49
BRF1-203ENST00000379937 SCNN1DP51172 638 aa18.1■□□□□ 0.49
BRF1-203ENST00000379937 CCDC39Q9UFE4 941 aa18.1■□□□□ 0.49
BRF1-203ENST00000379937 KDM3BQ7LBC6 1761 aa18.1■□□□□ 0.49
BRF1-203ENST00000379937 NAA30Q147X3 362 aaPredicted RBP18.1■□□□□ 0.49
BRF1-203ENST00000379937 CPLX2Q6PUV4 134 aaKnown RBP18.1■□□□□ 0.49
BRF1-203ENST00000379937 TGFBRAP1Q8WUH2 860 aa18.1■□□□□ 0.49
BRF1-203ENST00000379937 FAM84BQ96KN1 310 aaPredicted RBP18.1■□□□□ 0.49
BRF1-203ENST00000379937 USP17L3A6NCW0 530 aa18.1■□□□□ 0.49
BRF1-203ENST00000379937 USP17L4A6NCW7 530 aa18.1■□□□□ 0.49
BRF1-203ENST00000379937 G3V3G9 751 aa18.1■□□□□ 0.49
BRF1-203ENST00000379937 DCAF8Q5TAQ9 597 aa18.1■□□□□ 0.49
BRF1-203ENST00000379937 USP17L1Q7RTZ2 530 aa18.1■□□□□ 0.49
BRF1-203ENST00000379937 ZNF622Q969S3 477 aaKnown RBP eCLIP18.1■□□□□ 0.492e-8■■□□□ 12.3
BRF1-203ENST00000379937 PPP1R9BQ96SB3 815 aa18.1■□□□□ 0.49
BRF1-203ENST00000379937 CLIP2Q9UDT6 1046 aa18.1■□□□□ 0.49
BRF1-203ENST00000379937 MYSM1Q5VVJ2 828 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms