RNA–Protein interactions for RNA: ENST00000379472.4

KCNC1-202, Transcript of potassium voltage-gated channel subfamily C member 1, humanhuman

TSL 1 (best) BASIC

Gene KCNC1, Length 7,965 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC1-202ENST00000379472 MCUR1Q96AQ8 359 aa17.83■□□□□ 0.45
KCNC1-202ENST00000379472 DTHD1Q6ZMT9 781 aa17.83■□□□□ 0.45
KCNC1-202ENST00000379472 ARHGEF10LQ9HCE6 1279 aa17.83■□□□□ 0.45
KCNC1-202ENST00000379472 AFAP1Q8N556 730 aa17.83■□□□□ 0.44
KCNC1-202ENST00000379472 THUMPD2Q9BTF0 503 aaKnown RBP17.83■□□□□ 0.44
KCNC1-202ENST00000379472 DCUN1D2Q6PH85 259 aa17.83■□□□□ 0.44
KCNC1-202ENST00000379472 FCHSD1Q86WN1 690 aa17.83■□□□□ 0.44
KCNC1-202ENST00000379472 RILPQ96NA2 401 aa17.83■□□□□ 0.44
KCNC1-202ENST00000379472 ZNF365Q70YC5 407 aa17.83■□□□□ 0.44
KCNC1-202ENST00000379472 SAP30BPQ9UHR5 308 aaKnown RBP17.83■□□□□ 0.44
KCNC1-202ENST00000379472 SUFUQ9UMX1 484 aa17.82■□□□□ 0.44
KCNC1-202ENST00000379472 PALM3A6NDB9 673 aaPredicted RBP17.82■□□□□ 0.44
KCNC1-202ENST00000379472 PNMA2Q9UL42 364 aa17.82■□□□□ 0.44
KCNC1-202ENST00000379472 GNA11P29992 359 aa17.82■□□□□ 0.44
KCNC1-202ENST00000379472 TNNC1P63316 161 aa17.82■□□□□ 0.44
KCNC1-202ENST00000379472 SPAG1Q07617 926 aa17.82■□□□□ 0.44
KCNC1-202ENST00000379472 GBP6Q6ZN66 633 aa17.82■□□□□ 0.44
KCNC1-202ENST00000379472 KRT28Q7Z3Y7 464 aa17.82■□□□□ 0.44
KCNC1-202ENST00000379472 FNBP4Q8N3X1 1017 aaPredicted RBP17.82■□□□□ 0.44
KCNC1-202ENST00000379472 UTP11Q9Y3A2 253 aaKnown RBP17.82■□□□□ 0.44
KCNC1-202ENST00000379472 RYBPQ8N488 228 aaPredicted RBP17.82■□□□□ 0.44
KCNC1-202ENST00000379472 METTL13Q8N6R0 699 aa17.82■□□□□ 0.44
KCNC1-202ENST00000379472 PAXBP1Q9Y5B6 917 aa17.82■□□□□ 0.44
KCNC1-202ENST00000379472 TOM1O60784 492 aa17.81■□□□□ 0.44
KCNC1-202ENST00000379472 VAV2P52735 878 aa17.81■□□□□ 0.44
KCNC1-202ENST00000379472 ZNF449Q6P9G9 518 aa17.81■□□□□ 0.44
KCNC1-202ENST00000379472 GPCPD1Q9NPB8 672 aa17.81■□□□□ 0.44
KCNC1-202ENST00000379472 KRT33BQ14525 404 aa17.81■□□□□ 0.44
KCNC1-202ENST00000379472 ATP2A3Q93084 1043 aa17.81■□□□□ 0.44
KCNC1-202ENST00000379472 DNAI1Q9UI46 699 aa17.81■□□□□ 0.44
KCNC1-202ENST00000379472 LRRC2Q9BYS8 371 aa17.81■□□□□ 0.44
KCNC1-202ENST00000379472 IFNL2Q8IZJ0 200 aa17.81■□□□□ 0.44
KCNC1-202ENST00000379472 CXorf38Q8TB03 319 aa17.81■□□□□ 0.44
KCNC1-202ENST00000379472 LDHBP07195 334 aaKnown RBP17.81■□□□□ 0.44
KCNC1-202ENST00000379472 SND1Q7KZF4 910 aaKnown RBP eCLIP17.81■□□□□ 0.44
KCNC1-202ENST00000379472 SLC5A4Q9NY91 659 aa17.81■□□□□ 0.44
KCNC1-202ENST00000379472 CASP2P42575 452 aa17.8■□□□□ 0.44
KCNC1-202ENST00000379472 MRPL46Q9H2W6 279 aaKnown RBP17.8■□□□□ 0.44
KCNC1-202ENST00000379472 VCX3AQ9NNX9 186 aa17.8■□□□□ 0.44
KCNC1-202ENST00000379472 SPECC1L-ADORA2AF8WAN1 911 aa17.8■□□□□ 0.44
KCNC1-202ENST00000379472 CAPN9O14815 690 aa17.8■□□□□ 0.44
KCNC1-202ENST00000379472 PFDN6O15212 129 aa17.8■□□□□ 0.44
KCNC1-202ENST00000379472 ZBTB33Q86T24 672 aa17.8■□□□□ 0.44
KCNC1-202ENST00000379472 EXOC7Q9UPT5 735 aa17.8■□□□□ 0.44
KCNC1-202ENST00000379472 CUX1P39880 1505 aa17.8■□□□□ 0.44
KCNC1-202ENST00000379472 PDZD8Q8NEN9 1154 aa17.8■□□□□ 0.44
KCNC1-202ENST00000379472 CPSF2Q9P2I0 782 aaKnown RBP17.8■□□□□ 0.44
KCNC1-202ENST00000379472 AMOTL2Q9Y2J4 779 aa17.8■□□□□ 0.44
KCNC1-202ENST00000379472 PARP1P09874 1014 aaKnown RBP17.8■□□□□ 0.44
KCNC1-202ENST00000379472 EBAG9O00559 213 aa17.8■□□□□ 0.44
KCNC1-202ENST00000379472 TMPOP42166 694 aaKnown RBP17.8■□□□□ 0.44
KCNC1-202ENST00000379472 LGSNQ5TDP6 509 aa17.8■□□□□ 0.44
KCNC1-202ENST00000379472 TSPYL2Q9H2G4 693 aaPredicted RBP17.8■□□□□ 0.44
KCNC1-202ENST00000379472 HPDP32754 393 aaPredicted RBP17.79■□□□□ 0.44
KCNC1-202ENST00000379472 SCYL1Q96KG9 808 aa17.79■□□□□ 0.44
KCNC1-202ENST00000379472 RTL9Q8NET4 1388 aa17.79■□□□□ 0.44
KCNC1-202ENST00000379472 UBL4BQ8N7F7 174 aa17.79■□□□□ 0.44
KCNC1-202ENST00000379472 KCNG4Q8TDN1 519 aa17.79■□□□□ 0.44
KCNC1-202ENST00000379472 RBM17Q96I25 401 aaKnown RBP17.79■□□□□ 0.44
KCNC1-202ENST00000379472 VPS18Q9P253 973 aa17.79■□□□□ 0.44
KCNC1-202ENST00000379472 NOP14P78316 857 aaKnown RBP17.79■□□□□ 0.44
KCNC1-202ENST00000379472 ANKRD35Q8N283 1001 aa17.79■□□□□ 0.44
KCNC1-202ENST00000379472 GANCQ8TET4 914 aa17.79■□□□□ 0.44
KCNC1-202ENST00000379472 CAPN2P17655 700 aa17.79■□□□□ 0.44
KCNC1-202ENST00000379472 IRX3P78415 501 aaPredicted RBP17.79■□□□□ 0.44
KCNC1-202ENST00000379472 CNGA4Q8IV77 575 aa17.79■□□□□ 0.44
KCNC1-202ENST00000379472 HMG20BQ9P0W2 317 aa17.79■□□□□ 0.44
KCNC1-202ENST00000379472 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.78■□□□□ 0.44
KCNC1-202ENST00000379472 CCDC68Q9H2F9 335 aa17.78■□□□□ 0.44
KCNC1-202ENST00000379472 RNASE9P60153 205 aaKnown RBP17.78■□□□□ 0.44
KCNC1-202ENST00000379472 JADE1Q6IE81 842 aa17.78■□□□□ 0.44
KCNC1-202ENST00000379472 TPTE2Q6XPS3 522 aa17.78■□□□□ 0.44
KCNC1-202ENST00000379472 DCLK2Q8N568 766 aa17.78■□□□□ 0.44
KCNC1-202ENST00000379472 MAGEB6Q8N7X4 407 aa17.78■□□□□ 0.44
KCNC1-202ENST00000379472 ZNF277Q9NRM2 450 aaPredicted RBP17.78■□□□□ 0.44
KCNC1-202ENST00000379472 PHLDB2Q86SQ0 1253 aa17.78■□□□□ 0.44
KCNC1-202ENST00000379472 LCA5Q86VQ0 697 aa17.78■□□□□ 0.44
KCNC1-202ENST00000379472 PALM2Q8IXS6 379 aa17.78■□□□□ 0.44
KCNC1-202ENST00000379472 CALUO43852 315 aaPredicted RBP17.78■□□□□ 0.44
KCNC1-202ENST00000379472 P4HA1P13674 534 aa17.78■□□□□ 0.44
KCNC1-202ENST00000379472 DKC1O60832 514 aaKnown RBP eCLIP17.78■□□□□ 0.44
KCNC1-202ENST00000379472 XAB2Q9HCS7 855 aaKnown RBP17.78■□□□□ 0.44
KCNC1-202ENST00000379472 YARSP54577 528 aaKnown RBP17.78■□□□□ 0.44
KCNC1-202ENST00000379472 HHATQ5VTY9 493 aa17.78■□□□□ 0.44
KCNC1-202ENST00000379472 FAM8A1Q9UBU6 413 aa17.78■□□□□ 0.44
KCNC1-202ENST00000379472 STX17P56962 302 aa17.77■□□□□ 0.44
KCNC1-202ENST00000379472 LMNTD2Q8IXW0 634 aa17.77■□□□□ 0.44
KCNC1-202ENST00000379472 ECHDC1Q9NTX5 307 aa17.77■□□□□ 0.44
KCNC1-202ENST00000379472 CCDC61Q9Y6R9 512 aa17.77■□□□□ 0.44
KCNC1-202ENST00000379472 TYW5A2RUC4 315 aaKnown RBP17.77■□□□□ 0.44
KCNC1-202ENST00000379472 TRAF5O00463 557 aa17.77■□□□□ 0.44
KCNC1-202ENST00000379472 S100BP04271 92 aaPredicted RBP17.77■□□□□ 0.44
KCNC1-202ENST00000379472 RHOXF2BP0C7M4 288 aa17.77■□□□□ 0.44
KCNC1-202ENST00000379472 CD19P15391 556 aa17.77■□□□□ 0.44
KCNC1-202ENST00000379472 RHOXF2Q9BQY4 288 aa17.77■□□□□ 0.44
KCNC1-202ENST00000379472 RBM27Q9P2N5 1060 aaKnown RBP17.77■□□□□ 0.44
KCNC1-202ENST00000379472 COG7P83436 770 aa17.77■□□□□ 0.44
KCNC1-202ENST00000379472 USH1CQ9Y6N9 552 aa17.77■□□□□ 0.44
KCNC1-202ENST00000379472 ARHGEF35A5YM69 484 aa17.77■□□□□ 0.44
KCNC1-202ENST00000379472 TRIM75PA6NK02 468 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms