RNA–Protein interactions for RNA: ENST00000379237.6

USP6NL-202, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP6NL, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-202ENST00000379237 KIF5BP33176 963 aa12.36□□□□□ -0.43
USP6NL-202ENST00000379237 KAT2BQ92831 832 aa12.36□□□□□ -0.43
USP6NL-202ENST00000379237 NEUROD6Q96NK8 337 aa12.36□□□□□ -0.43
USP6NL-202ENST00000379237 KIF9Q9HAQ2 790 aa12.36□□□□□ -0.43
USP6NL-202ENST00000379237 POLD4Q9HCU8 107 aa12.36□□□□□ -0.43
USP6NL-202ENST00000379237 SAR1BQ9Y6B6 198 aa12.36□□□□□ -0.43
USP6NL-202ENST00000379237 IKBKBO14920 756 aa12.35□□□□□ -0.43
USP6NL-202ENST00000379237 HMGB1P09429 215 aaKnown RBP12.35□□□□□ -0.43
USP6NL-202ENST00000379237 AMPHP49418 695 aa12.35□□□□□ -0.43
USP6NL-202ENST00000379237 VAV2P52735 878 aa12.35□□□□□ -0.43
USP6NL-202ENST00000379237 MTF1Q14872 753 aa12.35□□□□□ -0.43
USP6NL-202ENST00000379237 PIK3R5Q8WYR1 880 aa12.35□□□□□ -0.43
USP6NL-202ENST00000379237 MED14O60244 1454 aa12.35□□□□□ -0.43
USP6NL-202ENST00000379237 PIK3R4Q99570 1358 aa12.35□□□□□ -0.43
USP6NL-202ENST00000379237 CPP00450 1065 aa12.35□□□□□ -0.43
USP6NL-202ENST00000379237 CLTAP09496 248 aa12.35□□□□□ -0.43
USP6NL-202ENST00000379237 SEMA3FQ13275 785 aa12.35□□□□□ -0.43
USP6NL-202ENST00000379237 HOMEZQ8IX15 550 aa12.35□□□□□ -0.43
USP6NL-202ENST00000379237 ZBTB10Q96DT7 871 aa12.35□□□□□ -0.43
USP6NL-202ENST00000379237 INCENPQ9NQS7 918 aa12.35□□□□□ -0.43
USP6NL-202ENST00000379237 A0A1W2PP64 1363 aa12.35□□□□□ -0.43
USP6NL-202ENST00000379237 HSP90AB2PQ58FF8 381 aa12.35□□□□□ -0.43
USP6NL-202ENST00000379237 ARFGAP2Q8N6H7 521 aa12.35□□□□□ -0.43
USP6NL-202ENST00000379237 GPTP24298 496 aa12.34□□□□□ -0.43
USP6NL-202ENST00000379237 CCT6AP40227 531 aaKnown RBP12.34□□□□□ -0.43
USP6NL-202ENST00000379237 EHBP1Q8NDI1 1231 aa12.34□□□□□ -0.43
USP6NL-202ENST00000379237 NGDNQ8NEJ9 315 aaKnown RBP12.34□□□□□ -0.43
USP6NL-202ENST00000379237 SEC62Q99442 399 aaKnown RBP12.34□□□□□ -0.43
USP6NL-202ENST00000379237 CSB-PGBD3P0DP91 1061 aa12.34□□□□□ -0.43
USP6NL-202ENST00000379237 IDEP14735 1019 aa12.34□□□□□ -0.43
USP6NL-202ENST00000379237 PIP4K2AP48426 406 aaPredicted RBP12.34□□□□□ -0.43
USP6NL-202ENST00000379237 ACRBPQ8NEB7 543 aa12.34□□□□□ -0.43
USP6NL-202ENST00000379237 AIDAQ96BJ3 306 aa12.34□□□□□ -0.43
USP6NL-202ENST00000379237 CLIC6Q96NY7 704 aa12.34□□□□□ -0.43
USP6NL-202ENST00000379237 ANKZF1Q9H8Y5 726 aa12.34□□□□□ -0.43
USP6NL-202ENST00000379237 RIMS2Q9UQ26 1411 aa12.34□□□□□ -0.43
USP6NL-202ENST00000379237 EIF3HO15372 352 aaKnown RBP eCLIP12.34□□□□□ -0.43
USP6NL-202ENST00000379237 SPA17Q15506 151 aa12.34□□□□□ -0.43
USP6NL-202ENST00000379237 WASHC4Q2M389 1173 aa12.34□□□□□ -0.43
USP6NL-202ENST00000379237 PARP9Q8IXQ6 854 aa12.34□□□□□ -0.43
USP6NL-202ENST00000379237 STAG1Q8WVM7 1258 aa12.34□□□□□ -0.43
USP6NL-202ENST00000379237 THOC1Q96FV9 657 aaKnown RBP12.34□□□□□ -0.43
USP6NL-202ENST00000379237 SELENOOQ9BVL4 669 aa12.34□□□□□ -0.43
USP6NL-202ENST00000379237 PA2G4Q9UQ80 394 aaKnown RBP12.34□□□□□ -0.43
USP6NL-202ENST00000379237 GOLGA8BA8MQT2 603 aa12.34□□□□□ -0.43
USP6NL-202ENST00000379237 COG1Q8WTW3 980 aa12.34□□□□□ -0.43
USP6NL-202ENST00000379237 TCP11Q8WWU5 503 aa12.34□□□□□ -0.43
USP6NL-202ENST00000379237 EID1Q9Y6B2 187 aa12.34□□□□□ -0.43
USP6NL-202ENST00000379237 KRT86O43790 486 aa12.33□□□□□ -0.44
USP6NL-202ENST00000379237 ENOX2Q16206 610 aaKnown RBP12.33□□□□□ -0.44
USP6NL-202ENST00000379237 EHD4Q9H223 541 aa12.33□□□□□ -0.44
USP6NL-202ENST00000379237 MACROD2A1Z1Q3 448 aa12.33□□□□□ -0.44
USP6NL-202ENST00000379237 MYO1EQ12965 1108 aa12.33□□□□□ -0.44
USP6NL-202ENST00000379237 NME9Q86XW9 330 aa12.33□□□□□ -0.44
USP6NL-202ENST00000379237 NOA1Q8NC60 698 aaKnown RBP12.33□□□□□ -0.44
USP6NL-202ENST00000379237 ZKSCAN4Q969J2 545 aaPredicted RBP12.33□□□□□ -0.44
USP6NL-202ENST00000379237 PSMB7Q99436 277 aa12.33□□□□□ -0.44
USP6NL-202ENST00000379237 MRPL44Q9H9J2 332 aaKnown RBP12.33□□□□□ -0.44
USP6NL-202ENST00000379237 KCND1Q9NSA2 647 aa12.33□□□□□ -0.44
USP6NL-202ENST00000379237 MAGEC2Q9UBF1 373 aaPredicted RBP12.33□□□□□ -0.44
USP6NL-202ENST00000379237 CLIC4Q9Y696 253 aa12.33□□□□□ -0.44
USP6NL-202ENST00000379237 PFKFB2O60825 505 aa12.33□□□□□ -0.44
USP6NL-202ENST00000379237 ZNF827Q17R98 1081 aa12.33□□□□□ -0.44
USP6NL-202ENST00000379237 ANO1Q5XXA6 986 aa12.33□□□□□ -0.44
USP6NL-202ENST00000379237 CAPRIN2Q6IMN6 1127 aaKnown RBP12.33□□□□□ -0.44
USP6NL-202ENST00000379237 TBC1D22AQ8WUA7 517 aa12.33□□□□□ -0.44
USP6NL-202ENST00000379237 NAA15Q9BXJ9 866 aaKnown RBP12.33□□□□□ -0.44
USP6NL-202ENST00000379237 C14orf93Q9H972 538 aaKnown RBP12.33□□□□□ -0.44
USP6NL-202ENST00000379237 ZNF330Q9Y3S2 320 aaPredicted RBP12.33□□□□□ -0.44
USP6NL-202ENST00000379237 CAND2O75155 1236 aa12.32□□□□□ -0.44
USP6NL-202ENST00000379237 SMIM24O75264 130 aa12.32□□□□□ -0.44
USP6NL-202ENST00000379237 AIMP1Q12904 312 aaKnown RBP12.32□□□□□ -0.44
USP6NL-202ENST00000379237 HIBCHQ6NVY1 386 aaPredicted RBP12.32□□□□□ -0.44
USP6NL-202ENST00000379237 CTAGE1Q96RT6 745 aa12.32□□□□□ -0.44
USP6NL-202ENST00000379237 IFFO1Q0D2I5 559 aa12.32□□□□□ -0.44
USP6NL-202ENST00000379237 RRP12Q5JTH9 1297 aaKnown RBP12.32□□□□□ -0.44
USP6NL-202ENST00000379237 TMTC1Q8IUR5 882 aa12.32□□□□□ -0.44
USP6NL-202ENST00000379237 GOLGA6L10A0A0M3HER8 536 aa12.32□□□□□ -0.44
USP6NL-202ENST00000379237 AFMP43652 599 aa12.32□□□□□ -0.44
USP6NL-202ENST00000379237 ANKS4BQ8N8V4 417 aa12.32□□□□□ -0.44
USP6NL-202ENST00000379237 HPCAL4Q9UM19 191 aa12.32□□□□□ -0.44
USP6NL-202ENST00000379237 GIGYF1O75420 1035 aaPredicted RBP12.32□□□□□ -0.44
USP6NL-202ENST00000379237 SETSIPP0DME0 302 aa12.32□□□□□ -0.44
USP6NL-202ENST00000379237 NEFHP12036 1026 aa12.32□□□□□ -0.44
USP6NL-202ENST00000379237 RWDD2BP57060 319 aa12.32□□□□□ -0.44
USP6NL-202ENST00000379237 TRIM68Q6AZZ1 485 aa12.32□□□□□ -0.44
USP6NL-202ENST00000379237 FMR1NBQ8N0W7 255 aaPredicted RBP12.32□□□□□ -0.44
USP6NL-202ENST00000379237 LLPHQ9BRT6 129 aaKnown RBP12.32□□□□□ -0.44
USP6NL-202ENST00000379237 CCDC113Q9H0I3 377 aa12.32□□□□□ -0.44
USP6NL-202ENST00000379237 EIF4E1BA6NMX2 242 aaKnown RBP12.31□□□□□ -0.44
USP6NL-202ENST00000379237 MRPS25P82663 173 aaKnown RBP12.31□□□□□ -0.44
USP6NL-202ENST00000379237 RAPGEF6Q8TEU7 1601 aa12.31□□□□□ -0.44
USP6NL-202ENST00000379237 USO1O60763 962 aaKnown RBP12.31□□□□□ -0.44
USP6NL-202ENST00000379237 KRT9P35527 623 aa12.31□□□□□ -0.44
USP6NL-202ENST00000379237 NECTIN1Q15223 517 aa12.31□□□□□ -0.44
USP6NL-202ENST00000379237 CCDC96Q2M329 555 aa12.31□□□□□ -0.44
USP6NL-202ENST00000379237 CYP26C1Q6V0L0 522 aa12.31□□□□□ -0.44
USP6NL-202ENST00000379237 CACNA2D3Q8IZS8 1091 aa12.31□□□□□ -0.44
USP6NL-202ENST00000379237 A0A1W2PQ27 194 aa12.31□□□□□ -0.44
USP6NL-202ENST00000379237 A0A1W2PQ64 194 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms