RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 ZEB1P37275 1124 aaPredicted RBP22.32■■□□□ 1.16
PDLIM4-202ENST00000379018 RABL6Q3YEC7 729 aaPredicted RBP22.32■■□□□ 1.16
PDLIM4-202ENST00000379018 FAM9BQ8IZU0 186 aa22.32■■□□□ 1.16
PDLIM4-202ENST00000379018 TRIOBPQ9H2D6 2365 aa22.31■■□□□ 1.16
PDLIM4-202ENST00000379018 PSMC4P43686 418 aa22.31■■□□□ 1.16
PDLIM4-202ENST00000379018 MTFR1Q15390 333 aa22.31■■□□□ 1.16
PDLIM4-202ENST00000379018 UTYO14607 1347 aa22.31■■□□□ 1.16
PDLIM4-202ENST00000379018 FMNL1O95466 1100 aaPredicted RBP22.3■■□□□ 1.16
PDLIM4-202ENST00000379018 CTGFP29279 349 aa22.3■■□□□ 1.16
PDLIM4-202ENST00000379018 PPATQ06203 517 aa22.3■■□□□ 1.16
PDLIM4-202ENST00000379018 PUM3Q15397 648 aaKnown RBP22.3■■□□□ 1.16
PDLIM4-202ENST00000379018 ZCCHC17Q9NP64 241 aaKnown RBP22.3■■□□□ 1.16
PDLIM4-202ENST00000379018 RPAP1Q9BWH6 1393 aaPredicted RBP22.29■■□□□ 1.16
PDLIM4-202ENST00000379018 PDHXO00330 501 aa22.29■■□□□ 1.16
PDLIM4-202ENST00000379018 DIXDC1Q155Q3 683 aa22.29■■□□□ 1.16
PDLIM4-202ENST00000379018 HHIPL2Q6UWX4 724 aa22.29■■□□□ 1.16
PDLIM4-202ENST00000379018 RAET1EQ8TD07 263 aa22.29■■□□□ 1.16
PDLIM4-202ENST00000379018 DPF3Q92784 378 aa22.29■■□□□ 1.16
PDLIM4-202ENST00000379018 BIN2Q9UBW5 565 aaPredicted RBP22.29■■□□□ 1.16
PDLIM4-202ENST00000379018 SLC5A1P13866 664 aa22.28■■□□□ 1.16
PDLIM4-202ENST00000379018 FKBP1CQ5VVH2 108 aa22.28■■□□□ 1.16
PDLIM4-202ENST00000379018 C17orf99Q6UX52 265 aa22.28■■□□□ 1.16
PDLIM4-202ENST00000379018 CHRDL2Q6WN34 429 aa22.28■■□□□ 1.16
PDLIM4-202ENST00000379018 TRIM47Q96LD4 638 aa22.28■■□□□ 1.16
PDLIM4-202ENST00000379018 GNRH1P01148 92 aa22.27■■□□□ 1.16
PDLIM4-202ENST00000379018 OSBPP22059 807 aa22.27■■□□□ 1.16
PDLIM4-202ENST00000379018 PRMT2P55345 433 aa22.27■■□□□ 1.16
PDLIM4-202ENST00000379018 ANKRD23Q86SG2 305 aa22.27■■□□□ 1.16
PDLIM4-202ENST00000379018 SHISA4Q96DD7 197 aa22.27■■□□□ 1.16
PDLIM4-202ENST00000379018 SRRDQ9UH36 339 aa22.27■■□□□ 1.16
PDLIM4-202ENST00000379018 SUGT1Q9Y2Z0 365 aa22.27■■□□□ 1.16
PDLIM4-202ENST00000379018 DAGLAQ9Y4D2 1042 aa22.27■■□□□ 1.16
PDLIM4-202ENST00000379018 MYPNQ86TC9 1320 aa22.27■■□□□ 1.16
PDLIM4-202ENST00000379018 NFIAQ12857 509 aa22.26■■□□□ 1.15
PDLIM4-202ENST00000379018 CDC42EP5Q6NZY7 148 aa22.26■■□□□ 1.15
PDLIM4-202ENST00000379018 MRPL50Q8N5N7 158 aaKnown RBP22.26■■□□□ 1.15
PDLIM4-202ENST00000379018 WDR66Q8TBY9 1149 aa22.26■■□□□ 1.15
PDLIM4-202ENST00000379018 FAM151AQ8WW52 585 aa22.26■■□□□ 1.15
PDLIM4-202ENST00000379018 MRIQ9BWK5 157 aa22.26■■□□□ 1.15
PDLIM4-202ENST00000379018 FGFR2P21802 821 aa22.25■■□□□ 1.15
PDLIM4-202ENST00000379018 HOXD10P28358 340 aa22.25■■□□□ 1.15
PDLIM4-202ENST00000379018 PRDX5P30044 214 aa22.25■■□□□ 1.15
PDLIM4-202ENST00000379018 GRK4P32298 578 aa22.25■■□□□ 1.15
PDLIM4-202ENST00000379018 SIL1Q9H173 461 aa22.25■■□□□ 1.15
PDLIM4-202ENST00000379018 EYA2O00167 538 aa22.24■■□□□ 1.15
PDLIM4-202ENST00000379018 CYP2C8P10632 490 aa22.23■■□□□ 1.15
PDLIM4-202ENST00000379018 CCL5P13501 91 aa22.23■■□□□ 1.15
PDLIM4-202ENST00000379018 PRKCZQ05513 592 aa22.23■■□□□ 1.15
PDLIM4-202ENST00000379018 LPIN2Q92539 896 aa22.23■■□□□ 1.15
PDLIM4-202ENST00000379018 PARK7Q99497 189 aaKnown RBP22.23■■□□□ 1.15
PDLIM4-202ENST00000379018 USP44Q9H0E7 712 aa22.23■■□□□ 1.15
PDLIM4-202ENST00000379018 RNF208Q9H0X6 261 aa22.23■■□□□ 1.15
PDLIM4-202ENST00000379018 USP40Q9NVE5 1235 aa22.23■■□□□ 1.15
PDLIM4-202ENST00000379018 KCNH4Q9UQ05 1017 aa22.23■■□□□ 1.15
PDLIM4-202ENST00000379018 KIF16BQ96L93 1317 aa22.23■■□□□ 1.15
PDLIM4-202ENST00000379018 ADGRA2Q96PE1 1338 aa22.23■■□□□ 1.15
PDLIM4-202ENST00000379018 LDHBP07195 334 aaKnown RBP22.22■■□□□ 1.15
PDLIM4-202ENST00000379018 FAM198AQ9UFP1 575 aa22.22■■□□□ 1.15
PDLIM4-202ENST00000379018 ZNF112Q9UJU3 913 aa22.22■■□□□ 1.15
PDLIM4-202ENST00000379018 ZFPM1Q8IX07 1006 aa22.21■■□□□ 1.15
PDLIM4-202ENST00000379018 PTPRCP08575 1304 aa22.21■■□□□ 1.15
PDLIM4-202ENST00000379018 MGAMO43451 1857 aa22.2■■□□□ 1.14
PDLIM4-202ENST00000379018 RFX5P48382 616 aaPredicted RBP22.2■■□□□ 1.14
PDLIM4-202ENST00000379018 FCGRTP55899 365 aa22.2■■□□□ 1.14
PDLIM4-202ENST00000379018 UBXN2AP68543 259 aa22.2■■□□□ 1.14
PDLIM4-202ENST00000379018 MOGSQ13724 837 aa22.2■■□□□ 1.14
PDLIM4-202ENST00000379018 ATP2B3Q16720 1220 aa22.2■■□□□ 1.14
PDLIM4-202ENST00000379018 GADL1Q6ZQY3 521 aa22.2■■□□□ 1.14
PDLIM4-202ENST00000379018 NKX2-3Q8TAU0 364 aa22.2■■□□□ 1.14
PDLIM4-202ENST00000379018 SSH1Q8WYL5 1049 aa22.2■■□□□ 1.14
PDLIM4-202ENST00000379018 DOCK2Q92608 1830 aa22.2■■□□□ 1.14
PDLIM4-202ENST00000379018 NOL9Q5SY16 702 aaKnown RBP22.19■■□□□ 1.14
PDLIM4-202ENST00000379018 ZSCAN29Q8IWY8 852 aaPredicted RBP22.19■■□□□ 1.14
PDLIM4-202ENST00000379018 GNL3LQ9NVN8 582 aaKnown RBP22.19■■□□□ 1.14
PDLIM4-202ENST00000379018 RBM27Q9P2N5 1060 aaKnown RBP22.19■■□□□ 1.14
PDLIM4-202ENST00000379018 GABRQQ9UN88 632 aa22.19■■□□□ 1.14
PDLIM4-202ENST00000379018 ZHX2Q9Y6X8 837 aa22.19■■□□□ 1.14
PDLIM4-202ENST00000379018 GJA8P48165 433 aa22.18■■□□□ 1.14
PDLIM4-202ENST00000379018 GPAT2Q6NUI2 795 aa22.18■■□□□ 1.14
PDLIM4-202ENST00000379018 ATG9AQ7Z3C6 839 aa22.18■■□□□ 1.14
PDLIM4-202ENST00000379018 PICK1Q9NRD5 415 aa22.18■■□□□ 1.14
PDLIM4-202ENST00000379018 TAOK2Q9UL54 1235 aa22.18■■□□□ 1.14
PDLIM4-202ENST00000379018 MYH2Q9UKX2 1941 aa22.18■■□□□ 1.14
PDLIM4-202ENST00000379018 GJB1P08034 283 aa22.17■■□□□ 1.14
PDLIM4-202ENST00000379018 BCRP11274 1271 aa22.17■■□□□ 1.14
PDLIM4-202ENST00000379018 PHKA1P46020 1223 aa22.17■■□□□ 1.14
PDLIM4-202ENST00000379018 RGS3P49796 1198 aa22.17■■□□□ 1.14
PDLIM4-202ENST00000379018 HTATIP2Q9BUP3 242 aa22.17■■□□□ 1.14
PDLIM4-202ENST00000379018 UNC93B1Q9H1C4 597 aa22.17■■□□□ 1.14
PDLIM4-202ENST00000379018 CEP126Q9P2H0 1117 aa22.17■■□□□ 1.14
PDLIM4-202ENST00000379018 CXCL11O14625 94 aa22.16■■□□□ 1.14
PDLIM4-202ENST00000379018 FARP2O94887 1054 aaPredicted RBP22.16■■□□□ 1.14
PDLIM4-202ENST00000379018 SLURP2P0DP57 97 aa22.16■■□□□ 1.14
PDLIM4-202ENST00000379018 SCYL3Q8IZE3 742 aa22.16■■□□□ 1.14
PDLIM4-202ENST00000379018 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.16■■□□□ 1.14
PDLIM4-202ENST00000379018 ELNP15502 786 aa22.15■■□□□ 1.14
PDLIM4-202ENST00000379018 PICALMQ13492 652 aa22.15■■□□□ 1.14
PDLIM4-202ENST00000379018 SLAIN1Q8ND83 568 aa22.15■■□□□ 1.14
PDLIM4-202ENST00000379018 U2AF1L4Q8WU68 220 aaKnown RBP22.15■■□□□ 1.14
PDLIM4-202ENST00000379018 DENND2AQ9ULE3 1009 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms