RNA–Protein interactions for RNA: ENST00000378821.3

TMEM88B-201, Transcript of transmembrane protein 88B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM88B, Length 492 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88B-201ENST00000378821 TFCP2Q12800 502 aa23.42■■□□□ 1.34
TMEM88B-201ENST00000378821 VGLL4Q14135 290 aa23.42■■□□□ 1.34
TMEM88B-201ENST00000378821 OPTNQ96CV9 577 aa23.42■■□□□ 1.34
TMEM88B-201ENST00000378821 PTPN18Q99952 460 aa23.42■■□□□ 1.34
TMEM88B-201ENST00000378821 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.42■■□□□ 1.34
TMEM88B-201ENST00000378821 PNMA6EA0A0J9YXQ4 647 aa23.41■■□□□ 1.34
TMEM88B-201ENST00000378821 DIXDC1Q155Q3 683 aa23.41■■□□□ 1.34
TMEM88B-201ENST00000378821 CDC42EP5Q6NZY7 148 aa23.41■■□□□ 1.34
TMEM88B-201ENST00000378821 ZGPATQ8N5A5 531 aaKnown RBP23.41■■□□□ 1.34
TMEM88B-201ENST00000378821 FAM151AQ8WW52 585 aa23.41■■□□□ 1.34
TMEM88B-201ENST00000378821 XAGE2Q96GT9 111 aa23.41■■□□□ 1.34
TMEM88B-201ENST00000378821 ELP3Q9H9T3 547 aa23.41■■□□□ 1.34
TMEM88B-201ENST00000378821 MYH2Q9UKX2 1941 aa23.4■■□□□ 1.34
TMEM88B-201ENST00000378821 FKTNO75072 461 aa23.4■■□□□ 1.34
TMEM88B-201ENST00000378821 RASGRF1Q13972 1273 aa23.4■■□□□ 1.34
TMEM88B-201ENST00000378821 FAM163AQ96GL9 167 aaPredicted RBP23.4■■□□□ 1.34
TMEM88B-201ENST00000378821 GAKO14976 1311 aa23.39■■□□□ 1.34
TMEM88B-201ENST00000378821 POLA2Q14181 598 aa23.39■■□□□ 1.33
TMEM88B-201ENST00000378821 OTUD7BQ6GQQ9 843 aa23.39■■□□□ 1.33
TMEM88B-201ENST00000378821 PANK1Q8TE04 598 aa23.39■■□□□ 1.33
TMEM88B-201ENST00000378821 SPDYE5A6NIY4 337 aa23.38■■□□□ 1.33
TMEM88B-201ENST00000378821 MVPQ14764 893 aaKnown RBP23.38■■□□□ 1.33
TMEM88B-201ENST00000378821 ITPRIPQ8IWB1 547 aa23.38■■□□□ 1.33
TMEM88B-201ENST00000378821 CNKSR2Q8WXI2 1034 aa23.38■■□□□ 1.33
TMEM88B-201ENST00000378821 FAM198AQ9UFP1 575 aa23.38■■□□□ 1.33
TMEM88B-201ENST00000378821 CSADQ9Y600 493 aa23.38■■□□□ 1.33
TMEM88B-201ENST00000378821 SNCAIPQ9Y6H5 919 aa23.38■■□□□ 1.33
TMEM88B-201ENST00000378821 DCAF15Q66K64 600 aa23.37■■□□□ 1.33
TMEM88B-201ENST00000378821 ZNF112Q9UJU3 913 aa23.37■■□□□ 1.33
TMEM88B-201ENST00000378821 GTF2A2P52657 109 aa23.36■■□□□ 1.33
TMEM88B-201ENST00000378821 NFIAQ12857 509 aa23.36■■□□□ 1.33
TMEM88B-201ENST00000378821 SSH3Q8TE77 659 aa23.36■■□□□ 1.33
TMEM88B-201ENST00000378821 USP40Q9NVE5 1235 aa23.36■■□□□ 1.33
TMEM88B-201ENST00000378821 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.36■■□□□ 1.33
TMEM88B-201ENST00000378821 ZBTB7BO15156 539 aaPredicted RBP23.35■■□□□ 1.33
TMEM88B-201ENST00000378821 ATP8B2P98198 1209 aa23.35■■□□□ 1.33
TMEM88B-201ENST00000378821 CRHR2Q13324 411 aa23.35■■□□□ 1.33
TMEM88B-201ENST00000378821 SPTY2D1Q68D10 685 aaPredicted RBP23.35■■□□□ 1.33
TMEM88B-201ENST00000378821 ERO1BQ86YB8 467 aa23.35■■□□□ 1.33
TMEM88B-201ENST00000378821 BRI3BPQ8WY22 251 aa23.35■■□□□ 1.33
TMEM88B-201ENST00000378821 WRNIP1Q96S55 665 aa23.35■■□□□ 1.33
TMEM88B-201ENST00000378821 IDI2Q9BXS1 227 aa23.35■■□□□ 1.33
TMEM88B-201ENST00000378821 HPS5Q9UPZ3 1129 aa23.35■■□□□ 1.33
TMEM88B-201ENST00000378821 RFX7Q2KHR2 1363 aa23.35■■□□□ 1.33
TMEM88B-201ENST00000378821 ARID4AP29374 1257 aaPredicted RBP23.34■■□□□ 1.33
TMEM88B-201ENST00000378821 MLLT1Q03111 559 aaPredicted RBP23.34■■□□□ 1.33
TMEM88B-201ENST00000378821 G3BP1Q13283 466 aaKnown RBP eCLIP23.34■■□□□ 1.33
TMEM88B-201ENST00000378821 FBXO46Q6PJ61 603 aaPredicted RBP23.34■■□□□ 1.33
TMEM88B-201ENST00000378821 ZKSCAN4Q969J2 545 aaPredicted RBP23.34■■□□□ 1.33
TMEM88B-201ENST00000378821 ZNF341Q9BYN7 854 aa23.34■■□□□ 1.33
TMEM88B-201ENST00000378821 GPR108Q9NPR9 543 aa23.34■■□□□ 1.33
TMEM88B-201ENST00000378821 SLF2Q8IX21 1173 aa23.33■■□□□ 1.33
TMEM88B-201ENST00000378821 OTUD5Q96G74 571 aa23.33■■□□□ 1.33
TMEM88B-201ENST00000378821 NEUROD6Q96NK8 337 aa23.33■■□□□ 1.33
TMEM88B-201ENST00000378821 HMG20BQ9P0W2 317 aa23.33■■□□□ 1.33
TMEM88B-201ENST00000378821 ATRNL1Q5VV63 1379 aa23.32■■□□□ 1.32
TMEM88B-201ENST00000378821 ENTPD3O75355 529 aa23.32■■□□□ 1.32
TMEM88B-201ENST00000378821 MS4A1P11836 297 aa23.32■■□□□ 1.32
TMEM88B-201ENST00000378821 MAP3K10Q02779 954 aa23.32■■□□□ 1.32
TMEM88B-201ENST00000378821 TCP10Q12799 353 aa23.32■■□□□ 1.32
TMEM88B-201ENST00000378821 MIGA2Q7L4E1 593 aa23.32■■□□□ 1.32
TMEM88B-201ENST00000378821 ZFPM1Q8IX07 1006 aa23.32■■□□□ 1.32
TMEM88B-201ENST00000378821 ZNF384Q8TF68 577 aa23.32■■□□□ 1.32
TMEM88B-201ENST00000378821 ZCCHC17Q9NP64 241 aaKnown RBP23.32■■□□□ 1.32
TMEM88B-201ENST00000378821 CCL15-CCL14A0A0B4J2E2 113 aa23.31■■□□□ 1.32
TMEM88B-201ENST00000378821 PPIL2Q13356 520 aa23.31■■□□□ 1.32
TMEM88B-201ENST00000378821 CCL15Q16663 113 aa23.31■■□□□ 1.32
TMEM88B-201ENST00000378821 DZIP1Q86YF9 867 aaKnown RBP23.31■■□□□ 1.32
TMEM88B-201ENST00000378821 SPATA5Q8NB90 893 aa23.31■■□□□ 1.32
TMEM88B-201ENST00000378821 C1orf115Q9H7X2 142 aa23.31■■□□□ 1.32
TMEM88B-201ENST00000378821 ABCF2Q9UG63 623 aa23.31■■□□□ 1.32
TMEM88B-201ENST00000378821 NOP58Q9Y2X3 529 aaKnown RBP23.31■■□□□ 1.32
TMEM88B-201ENST00000378821 AK9Q5TCS8 1911 aa23.31■■□□□ 1.32
TMEM88B-201ENST00000378821 GPR75-ASB3A0A0A6YYF3 556 aa23.3■■□□□ 1.32
TMEM88B-201ENST00000378821 IRF6O14896 467 aa23.3■■□□□ 1.32
TMEM88B-201ENST00000378821 INPP5BP32019 993 aa23.3■■□□□ 1.32
TMEM88B-201ENST00000378821 MECOMQ03112 1051 aa23.3■■□□□ 1.32
TMEM88B-201ENST00000378821 PPATQ06203 517 aa23.3■■□□□ 1.32
TMEM88B-201ENST00000378821 NOL9Q5SY16 702 aaKnown RBP23.3■■□□□ 1.32
TMEM88B-201ENST00000378821 ERICH6Q7L0X2 663 aa23.3■■□□□ 1.32
TMEM88B-201ENST00000378821 TNRC18O15417 2968 aaPredicted RBP23.3■■□□□ 1.32
TMEM88B-201ENST00000378821 MROH7-TTC4A0A0A0MT08 1334 aa23.3■■□□□ 1.32
TMEM88B-201ENST00000378821 DOCK2Q92608 1830 aa23.29■■□□□ 1.32
TMEM88B-201ENST00000378821 NPM3O75607 178 aaKnown RBP23.29■■□□□ 1.32
TMEM88B-201ENST00000378821 WDHD1O75717 1129 aaPredicted RBP23.29■■□□□ 1.32
TMEM88B-201ENST00000378821 CETPP11597 493 aa23.29■■□□□ 1.32
TMEM88B-201ENST00000378821 OTOP1Q7RTM1 612 aa23.29■■□□□ 1.32
TMEM88B-201ENST00000378821 FAM43AQ8N2R8 423 aa23.29■■□□□ 1.32
TMEM88B-201ENST00000378821 ERO1AQ96HE7 468 aa23.29■■□□□ 1.32
TMEM88B-201ENST00000378821 PHF20L1A8MW92 1017 aa23.28■■□□□ 1.32
TMEM88B-201ENST00000378821 MAP4K4O95819 1239 aaPredicted RBP23.28■■□□□ 1.32
TMEM88B-201ENST00000378821 UQCRFS1P1P0C7P4 283 aa23.28■■□□□ 1.32
TMEM88B-201ENST00000378821 MCAMP43121 646 aa23.28■■□□□ 1.32
TMEM88B-201ENST00000378821 RGS3P49796 1198 aa23.28■■□□□ 1.32
TMEM88B-201ENST00000378821 RHBDL3P58872 404 aa23.28■■□□□ 1.32
TMEM88B-201ENST00000378821 SNAPC2Q13487 334 aa23.28■■□□□ 1.32
TMEM88B-201ENST00000378821 C20orf194Q5TEA3 1177 aa23.28■■□□□ 1.32
TMEM88B-201ENST00000378821 PI16Q6UXB8 463 aa23.28■■□□□ 1.32
TMEM88B-201ENST00000378821 KCNH4Q9UQ05 1017 aa23.28■■□□□ 1.32
TMEM88B-201ENST00000378821 COG6Q9Y2V7 657 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms