RNA–Protein interactions for RNA: ENST00000378513.7

RER1-203, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 3 BASIC

Gene RER1, Length 3,000 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-203ENST00000378513 SMIM5Q71RC9 77 aa17.85■□□□□ 0.45
RER1-203ENST00000378513 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.85■□□□□ 0.45
RER1-203ENST00000378513 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.85■□□□□ 0.458e-12■■□□□ 14.3
RER1-203ENST00000378513 CPDO75976 1380 aa17.85■□□□□ 0.45
RER1-203ENST00000378513 DHX16O60231 1041 aaKnown RBP17.84■□□□□ 0.45
RER1-203ENST00000378513 RANBP6O60518 1105 aaKnown RBP17.84■□□□□ 0.45
RER1-203ENST00000378513 TMEM67Q5HYA8 995 aa17.84■□□□□ 0.45
RER1-203ENST00000378513 APOA5Q6Q788 366 aa17.84■□□□□ 0.45
RER1-203ENST00000378513 GRIN1Q05586 938 aa17.84■□□□□ 0.45
RER1-203ENST00000378513 NKX1-1Q15270 411 aaPredicted RBP17.84■□□□□ 0.45
RER1-203ENST00000378513 ACSBG1Q96GR2 724 aa17.84■□□□□ 0.45
RER1-203ENST00000378513 NWD2Q9ULI1 1742 aa17.84■□□□□ 0.45
RER1-203ENST00000378513 PDE8BO95263 885 aa17.83■□□□□ 0.45
RER1-203ENST00000378513 KCNG4Q8TDN1 519 aa17.83■□□□□ 0.45
RER1-203ENST00000378513 DPF2Q92785 391 aa17.83■□□□□ 0.45
RER1-203ENST00000378513 MRFAP1L1Q96HT8 127 aa17.83■□□□□ 0.45
RER1-203ENST00000378513 TMX1Q9H3N1 280 aa17.83■□□□□ 0.45
RER1-203ENST00000378513 EPB41L4AQ9HCS5 686 aaPredicted RBP17.83■□□□□ 0.45
RER1-203ENST00000378513 GOLGB1Q14789 3259 aaKnown RBP17.83■□□□□ 0.45
RER1-203ENST00000378513 UBN2Q6ZU65 1347 aa17.83■□□□□ 0.44
RER1-203ENST00000378513 GOLGA8AA7E2F4 631 aa17.83■□□□□ 0.44
RER1-203ENST00000378513 PTPN14Q15678 1187 aa17.83■□□□□ 0.44
RER1-203ENST00000378513 LRRFIP1Q32MZ4 808 aaKnown RBP17.83■□□□□ 0.44
RER1-203ENST00000378513 PDILTQ8N807 584 aa17.83■□□□□ 0.44
RER1-203ENST00000378513 ZSWIM5Q9P217 1185 aa17.83■□□□□ 0.44
RER1-203ENST00000378513 IFIT3O14879 490 aaKnown RBP17.82■□□□□ 0.44
RER1-203ENST00000378513 ZBTB22O15209 634 aa17.82■□□□□ 0.44
RER1-203ENST00000378513 BCAMP50895 628 aa17.82■□□□□ 0.44
RER1-203ENST00000378513 ZNF827Q17R98 1081 aa17.82■□□□□ 0.44
RER1-203ENST00000378513 SHC4Q6S5L8 630 aa17.82■□□□□ 0.44
RER1-203ENST00000378513 NUP133Q8WUM0 1156 aa17.82■□□□□ 0.44
RER1-203ENST00000378513 ZNF215Q9UL58 517 aaPredicted RBP17.82■□□□□ 0.44
RER1-203ENST00000378513 ZBTB43O43298 467 aa17.82■□□□□ 0.44
RER1-203ENST00000378513 SYKP43405 635 aa17.82■□□□□ 0.44
RER1-203ENST00000378513 RASGRF1Q13972 1273 aa17.82■□□□□ 0.44
RER1-203ENST00000378513 SARM1Q6SZW1 724 aa17.82■□□□□ 0.44
RER1-203ENST00000378513 DZIP3Q86Y13 1208 aaKnown RBP17.82■□□□□ 0.44
RER1-203ENST00000378513 GRAMD1CQ8IYS0 662 aa17.82■□□□□ 0.44
RER1-203ENST00000378513 POLR3EQ9NVU0 708 aa17.82■□□□□ 0.44
RER1-203ENST00000378513 SH2B2O14492 632 aaPredicted RBP17.82■□□□□ 0.44
RER1-203ENST00000378513 EVCP57679 992 aa17.82■□□□□ 0.44
RER1-203ENST00000378513 ARMCX5Q6P1M9 558 aa17.82■□□□□ 0.44
RER1-203ENST00000378513 NAT10Q9H0A0 1025 aaKnown RBP17.82■□□□□ 0.44
RER1-203ENST00000378513 BTBD18B2RXH4 712 aa17.81■□□□□ 0.44
RER1-203ENST00000378513 KCNQ4P56696 695 aa17.81■□□□□ 0.44
RER1-203ENST00000378513 NAPBQ9H115 298 aa17.81■□□□□ 0.44
RER1-203ENST00000378513 IARSP41252 1262 aaKnown RBP17.81■□□□□ 0.44
RER1-203ENST00000378513 SLC4A8Q2Y0W8 1093 aa17.81■□□□□ 0.44
RER1-203ENST00000378513 FAM177A1Q8N128 213 aaPredicted RBP17.81■□□□□ 0.44
RER1-203ENST00000378513 VGLL2Q8N8G2 317 aa17.81■□□□□ 0.44
RER1-203ENST00000378513 LRRN4CLQ8ND94 238 aa17.81■□□□□ 0.44
RER1-203ENST00000378513 MYO5AQ9Y4I1 1855 aaKnown RBP17.81■□□□□ 0.44
RER1-203ENST00000378513 ERICH4A6NGS2 130 aa17.8■□□□□ 0.44
RER1-203ENST00000378513 SMTNL1A8MU46 457 aa17.8■□□□□ 0.44
RER1-203ENST00000378513 LONRF3Q496Y0 759 aa17.8■□□□□ 0.44
RER1-203ENST00000378513 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.8■□□□□ 0.44
RER1-203ENST00000378513 STRBPQ96SI9 672 aaKnown RBP17.8■□□□□ 0.44
RER1-203ENST00000378513 LMTK3Q96Q04 1460 aa17.8■□□□□ 0.44
RER1-203ENST00000378513 PKD1L3Q7Z443 1732 aa17.8■□□□□ 0.44
RER1-203ENST00000378513 CYP19A1P11511 503 aaPredicted RBP17.8■□□□□ 0.44
RER1-203ENST00000378513 FAM217BQ9NTX9 383 aaPredicted RBP17.8■□□□□ 0.44
RER1-203ENST00000378513 TMEM232C9JQI7 657 aa17.8■□□□□ 0.44
RER1-203ENST00000378513 YEATS4O95619 227 aa17.8■□□□□ 0.44
RER1-203ENST00000378513 NR5A1Q13285 461 aa17.8■□□□□ 0.44
RER1-203ENST00000378513 LCORLQ8N3X6 602 aa17.8■□□□□ 0.44
RER1-203ENST00000378513 SDR42E1Q8WUS8 393 aa17.8■□□□□ 0.44
RER1-203ENST00000378513 ABCF2Q9UG63 623 aa17.8■□□□□ 0.44
RER1-203ENST00000378513 ZMYM6O95789 1325 aa17.79■□□□□ 0.44
RER1-203ENST00000378513 A0A1W2PQ27 194 aa17.79■□□□□ 0.44
RER1-203ENST00000378513 A0A1W2PQ64 194 aa17.79■□□□□ 0.44
RER1-203ENST00000378513 A0A1W2PQD8 194 aa17.79■□□□□ 0.44
RER1-203ENST00000378513 MINDY4BA8MYZ0 360 aa17.79■□□□□ 0.44
RER1-203ENST00000378513 CTIFO43310 598 aaKnown RBP17.79■□□□□ 0.44
RER1-203ENST00000378513 NCAPHQ15003 741 aa17.79■□□□□ 0.44
RER1-203ENST00000378513 UTP14CQ5TAP6 766 aaKnown RBP17.79■□□□□ 0.44
RER1-203ENST00000378513 IFNL3Q8IZI9 196 aa17.79■□□□□ 0.44
RER1-203ENST00000378513 CCAR2Q8N163 923 aaKnown RBP17.79■□□□□ 0.44
RER1-203ENST00000378513 SPATA5Q8NB90 893 aa17.79■□□□□ 0.44
RER1-203ENST00000378513 IGDCC4Q8TDY8 1250 aa17.79■□□□□ 0.44
RER1-203ENST00000378513 LY9Q9HBG7 655 aa17.79■□□□□ 0.44
RER1-203ENST00000378513 TDO2P48775 406 aa17.79■□□□□ 0.44
RER1-203ENST00000378513 SLC39A14Q15043 492 aa17.79■□□□□ 0.44
RER1-203ENST00000378513 FOXP4Q8IVH2 680 aaPredicted RBP17.79■□□□□ 0.44
RER1-203ENST00000378513 SLC12A7Q9Y666 1083 aa17.79■□□□□ 0.44
RER1-203ENST00000378513 NUP188Q5SRE5 1749 aa17.79■□□□□ 0.44
RER1-203ENST00000378513 CYP2D7A0A087X1C5 515 aa17.78■□□□□ 0.44
RER1-203ENST00000378513 CAVIN2O95810 425 aa17.78■□□□□ 0.44
RER1-203ENST00000378513 CDC25BP30305 580 aa17.78■□□□□ 0.44
RER1-203ENST00000378513 TRIM28Q13263 835 aaKnown RBP17.78■□□□□ 0.44
RER1-203ENST00000378513 SUSD4Q5VX71 490 aa17.78■□□□□ 0.44
RER1-203ENST00000378513 BRAPQ7Z569 592 aa17.78■□□□□ 0.44
RER1-203ENST00000378513 TRMT44Q8IYL2 757 aaKnown RBP17.78■□□□□ 0.44
RER1-203ENST00000378513 ZBTB9Q96C00 473 aa17.78■□□□□ 0.44
RER1-203ENST00000378513 MPHOSPH8Q99549 860 aa17.78■□□□□ 0.44
RER1-203ENST00000378513 PRDM1O75626 825 aa17.78■□□□□ 0.44
RER1-203ENST00000378513 E4F1Q66K89 784 aaPredicted RBP17.78■□□□□ 0.44
RER1-203ENST00000378513 ATL3Q6DD88 541 aa17.78■□□□□ 0.44
RER1-203ENST00000378513 SYT10Q6XYQ8 523 aa17.78■□□□□ 0.44
RER1-203ENST00000378513 ANKRD7Q92527 254 aa17.78■□□□□ 0.44
RER1-203ENST00000378513 FAM205CA6NFA0 338 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms