RNA–Protein interactions for RNA: ENST00000378387.3

ARHGEF39-201, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARHGEF39, Length 3,769 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-201ENST00000378387 A0A1B0GUA9 196 aa11.95□□□□□ -0.5
ARHGEF39-201ENST00000378387 MAP2K7O14733 419 aa11.95□□□□□ -0.5
ARHGEF39-201ENST00000378387 KIF1CO43896 1103 aaKnown RBP11.95□□□□□ -0.5
ARHGEF39-201ENST00000378387 MYSM1Q5VVJ2 828 aa11.95□□□□□ -0.5
ARHGEF39-201ENST00000378387 IQUBQ8NA54 791 aa11.95□□□□□ -0.5
ARHGEF39-201ENST00000378387 KAT2BQ92831 832 aa11.95□□□□□ -0.5
ARHGEF39-201ENST00000378387 TBC1D31Q96DN5 1066 aa11.95□□□□□ -0.5
ARHGEF39-201ENST00000378387 VPS16Q9H269 839 aa11.95□□□□□ -0.5
ARHGEF39-201ENST00000378387 MCM3P25205 808 aa11.95□□□□□ -0.5
ARHGEF39-201ENST00000378387 MMP14P50281 582 aa11.95□□□□□ -0.5
ARHGEF39-201ENST00000378387 NAIF1Q69YI7 327 aaPredicted RBP11.95□□□□□ -0.5
ARHGEF39-201ENST00000378387 FCHSD1Q86WN1 690 aa11.95□□□□□ -0.5
ARHGEF39-201ENST00000378387 PUS7Q96PZ0 661 aaKnown RBP11.95□□□□□ -0.5
ARHGEF39-201ENST00000378387 MYOM1P52179 1685 aa11.94□□□□□ -0.5
ARHGEF39-201ENST00000378387 RBL2Q08999 1139 aa11.94□□□□□ -0.5
ARHGEF39-201ENST00000378387 B4GALNT4Q76KP1 1039 aa11.94□□□□□ -0.5
ARHGEF39-201ENST00000378387 SUGP1Q8IWZ8 645 aaKnown RBP11.94□□□□□ -0.5
ARHGEF39-201ENST00000378387 NGDNQ8NEJ9 315 aaKnown RBP11.94□□□□□ -0.5
ARHGEF39-201ENST00000378387 HDAC6Q9UBN7 1215 aa11.94□□□□□ -0.5
ARHGEF39-201ENST00000378387 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.94□□□□□ -0.5
ARHGEF39-201ENST00000378387 REREQ9P2R6 1566 aa11.94□□□□□ -0.5
ARHGEF39-201ENST00000378387 HSF2BPO75031 334 aa11.94□□□□□ -0.5
ARHGEF39-201ENST00000378387 TAF5LO75529 589 aa11.94□□□□□ -0.5
ARHGEF39-201ENST00000378387 RAPGEF3O95398 923 aa11.94□□□□□ -0.5
ARHGEF39-201ENST00000378387 FKBP4Q02790 459 aaKnown RBP eCLIP11.94□□□□□ -0.5
ARHGEF39-201ENST00000378387 GRAMD1CQ8IYS0 662 aa11.94□□□□□ -0.5
ARHGEF39-201ENST00000378387 IQGAP1P46940 1657 aa11.94□□□□□ -0.5
ARHGEF39-201ENST00000378387 MACROD2A1Z1Q3 448 aa11.94□□□□□ -0.5
ARHGEF39-201ENST00000378387 PAX7P23759 505 aa11.94□□□□□ -0.5
ARHGEF39-201ENST00000378387 CASP14P31944 242 aa11.94□□□□□ -0.5
ARHGEF39-201ENST00000378387 IRAK1P51617 712 aa11.94□□□□□ -0.5
ARHGEF39-201ENST00000378387 CCDC121Q6ZUS5 278 aa11.94□□□□□ -0.5
ARHGEF39-201ENST00000378387 MAATS1Q7Z4T9 603 aa11.94□□□□□ -0.5
ARHGEF39-201ENST00000378387 NUTM2AQ8IVF1 878 aaPredicted RBP11.94□□□□□ -0.5
ARHGEF39-201ENST00000378387 PPANQ9NQ55 473 aaKnown RBP11.94□□□□□ -0.5
ARHGEF39-201ENST00000378387 KCNH3Q9ULD8 1083 aa11.94□□□□□ -0.5
ARHGEF39-201ENST00000378387 IKBKBO14920 756 aa11.93□□□□□ -0.5
ARHGEF39-201ENST00000378387 PPP1R12BO60237 982 aaPredicted RBP11.93□□□□□ -0.5
ARHGEF39-201ENST00000378387 ELF1P32519 619 aa11.93□□□□□ -0.5
ARHGEF39-201ENST00000378387 SAFBQ15424 915 aaKnown RBP eCLIP11.93□□□□□ -0.5
ARHGEF39-201ENST00000378387 CCDC122Q5T0U0 273 aa11.93□□□□□ -0.5
ARHGEF39-201ENST00000378387 FOXN1O15353 648 aa11.93□□□□□ -0.5
ARHGEF39-201ENST00000378387 GIGYF1O75420 1035 aaPredicted RBP11.93□□□□□ -0.5
ARHGEF39-201ENST00000378387 HMGB1P09429 215 aaKnown RBP11.93□□□□□ -0.5
ARHGEF39-201ENST00000378387 MYL6BP14649 208 aa11.93□□□□□ -0.5
ARHGEF39-201ENST00000378387 NCAPHQ15003 741 aa11.93□□□□□ -0.5
ARHGEF39-201ENST00000378387 MICU3Q86XE3 530 aa11.93□□□□□ -0.5
ARHGEF39-201ENST00000378387 IFT81Q8WYA0 676 aa11.93□□□□□ -0.5
ARHGEF39-201ENST00000378387 STAMQ92783 540 aa11.93□□□□□ -0.5
ARHGEF39-201ENST00000378387 BAIAP2L1Q9UHR4 511 aa11.93□□□□□ -0.5
ARHGEF39-201ENST00000378387 MYOM2P54296 1465 aa11.93□□□□□ -0.5
ARHGEF39-201ENST00000378387 POLR2DO15514 142 aaKnown RBP11.93□□□□□ -0.5
ARHGEF39-201ENST00000378387 TEX33O43247 280 aa11.93□□□□□ -0.5
ARHGEF39-201ENST00000378387 KCNJ6P48051 423 aa11.93□□□□□ -0.5
ARHGEF39-201ENST00000378387 FAM69CQ0P6D2 419 aa11.93□□□□□ -0.5
ARHGEF39-201ENST00000378387 NEXNQ0ZGT2 675 aa11.93□□□□□ -0.5
ARHGEF39-201ENST00000378387 MCMDC2Q4G0Z9 681 aa11.93□□□□□ -0.5
ARHGEF39-201ENST00000378387 ALG1Q9BT22 464 aa11.93□□□□□ -0.5
ARHGEF39-201ENST00000378387 RTEL1Q9NZ71 1219 aa11.93□□□□□ -0.5
ARHGEF39-201ENST00000378387 CCDC61Q9Y6R9 512 aa11.93□□□□□ -0.5
ARHGEF39-201ENST00000378387 IQCA1Q86XH1 822 aa11.92□□□□□ -0.5
ARHGEF39-201ENST00000378387 TC2NQ8N9U0 490 aa11.92□□□□□ -0.5
ARHGEF39-201ENST00000378387 AIDAQ96BJ3 306 aa11.92□□□□□ -0.5
ARHGEF39-201ENST00000378387 SNRKQ9NRH2 765 aa11.92□□□□□ -0.5
ARHGEF39-201ENST00000378387 GOLGA6L10A6NI86 522 aa11.92□□□□□ -0.5
ARHGEF39-201ENST00000378387 OPA1O60313 960 aa11.92□□□□□ -0.5
ARHGEF39-201ENST00000378387 PFKFB2O60825 505 aa11.92□□□□□ -0.5
ARHGEF39-201ENST00000378387 KIF4AO95239 1232 aa11.92□□□□□ -0.5
ARHGEF39-201ENST00000378387 LMOD2Q6P5Q4 547 aa11.92□□□□□ -0.5
ARHGEF39-201ENST00000378387 MAPK8IP1Q9UQF2 711 aa11.92□□□□□ -0.5
ARHGEF39-201ENST00000378387 ZBTB12Q9Y330 459 aaPredicted RBP11.92□□□□□ -0.5
ARHGEF39-201ENST00000378387 ADGRG1Q9Y653 693 aa11.92□□□□□ -0.5
ARHGEF39-201ENST00000378387 EIF4E1BA6NMX2 242 aaKnown RBP11.92□□□□□ -0.5
ARHGEF39-201ENST00000378387 E7EVH7 732 aa11.92□□□□□ -0.5
ARHGEF39-201ENST00000378387 CHUKO15111 745 aa11.92□□□□□ -0.5
ARHGEF39-201ENST00000378387 A1BGP04217 495 aa11.92□□□□□ -0.5
ARHGEF39-201ENST00000378387 TUBBP07437 444 aa11.92□□□□□ -0.5
ARHGEF39-201ENST00000378387 WHAMMP3Q1A5X7 153 aa11.92□□□□□ -0.5
ARHGEF39-201ENST00000378387 ATL3Q6DD88 541 aa11.92□□□□□ -0.5
ARHGEF39-201ENST00000378387 AIFM3Q96NN9 605 aa11.92□□□□□ -0.5
ARHGEF39-201ENST00000378387 LLPHQ9BRT6 129 aaKnown RBP11.92□□□□□ -0.5
ARHGEF39-201ENST00000378387 TRIM6Q9C030 488 aaPredicted RBP11.92□□□□□ -0.5
ARHGEF39-201ENST00000378387 PLCH2O75038 1416 aa11.91□□□□□ -0.5
ARHGEF39-201ENST00000378387 ZFYVE9O95405 1425 aa11.91□□□□□ -0.5
ARHGEF39-201ENST00000378387 A0A1W2PQ27 194 aa11.91□□□□□ -0.5
ARHGEF39-201ENST00000378387 A0A1W2PQ64 194 aa11.91□□□□□ -0.5
ARHGEF39-201ENST00000378387 A0A1W2PQD8 194 aa11.91□□□□□ -0.5
ARHGEF39-201ENST00000378387 KRT9P35527 623 aa11.91□□□□□ -0.5
ARHGEF39-201ENST00000378387 PPFIA1Q13136 1202 aa11.91□□□□□ -0.5
ARHGEF39-201ENST00000378387 RAD9BQ6WBX8 426 aa11.91□□□□□ -0.5
ARHGEF39-201ENST00000378387 MICAL1Q8TDZ2 1067 aa11.91□□□□□ -0.5
ARHGEF39-201ENST00000378387 CPSF2Q9P2I0 782 aaKnown RBP11.91□□□□□ -0.5
ARHGEF39-201ENST00000378387 YEATS4O95619 227 aa11.91□□□□□ -0.5
ARHGEF39-201ENST00000378387 CMA1P23946 247 aa11.91□□□□□ -0.5
ARHGEF39-201ENST00000378387 SLC7A5Q01650 507 aa11.91□□□□□ -0.5
ARHGEF39-201ENST00000378387 FMNL3Q8IVF7 1028 aa11.91□□□□□ -0.5
ARHGEF39-201ENST00000378387 UBXN6Q9BZV1 441 aa11.91□□□□□ -0.5
ARHGEF39-201ENST00000378387 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.91□□□□□ -0.5
ARHGEF39-201ENST00000378387 ADD1P35611 737 aaKnown RBP11.91□□□□□ -0.5
ARHGEF39-201ENST00000378387 SF3B2Q13435 895 aaKnown RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms