RNA–Protein interactions for RNA: ENST00000378105.4

PCDHGA1-201, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA1, Length 4,069 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-201ENST00000378105 NSFL1CQ9UNZ2 370 aaKnown RBP12.47□□□□□ -0.41
PCDHGA1-201ENST00000378105 JAKMIP3Q5VZ66 844 aa12.46□□□□□ -0.41
PCDHGA1-201ENST00000378105 MYLK4Q86YV6 388 aaPredicted RBP12.46□□□□□ -0.41
PCDHGA1-201ENST00000378105 ANKRD18AQ8IVF6 992 aa12.46□□□□□ -0.41
PCDHGA1-201ENST00000378105 TXLNBQ8N3L3 684 aa12.46□□□□□ -0.41
PCDHGA1-201ENST00000378105 CCDC112Q8NEF3 446 aa12.46□□□□□ -0.41
PCDHGA1-201ENST00000378105 ETAA1Q9NY74 926 aa12.46□□□□□ -0.41
PCDHGA1-201ENST00000378105 CYP27B1O15528 508 aa12.46□□□□□ -0.41
PCDHGA1-201ENST00000378105 ERVV-2B6SEH9 535 aa12.46□□□□□ -0.42
PCDHGA1-201ENST00000378105 KLHL40Q2TBA0 621 aa12.46□□□□□ -0.42
PCDHGA1-201ENST00000378105 KLHL23Q8NBE8 558 aa12.46□□□□□ -0.42
PCDHGA1-201ENST00000378105 CCDC87Q9NVE4 849 aa12.46□□□□□ -0.42
PCDHGA1-201ENST00000378105 TRPC5Q9UL62 973 aaPredicted RBP12.46□□□□□ -0.42
PCDHGA1-201ENST00000378105 CCNHP51946 323 aaPredicted RBP12.45□□□□□ -0.42
PCDHGA1-201ENST00000378105 HDAC1Q13547 482 aaPredicted RBP12.45□□□□□ -0.42
PCDHGA1-201ENST00000378105 DZIP1Q86YF9 867 aaKnown RBP12.45□□□□□ -0.42
PCDHGA1-201ENST00000378105 PLBD2Q8NHP8 589 aa12.45□□□□□ -0.42
PCDHGA1-201ENST00000378105 ZBTB10Q96DT7 871 aa12.45□□□□□ -0.42
PCDHGA1-201ENST00000378105 CTDP1Q9Y5B0 961 aaPredicted RBP12.45□□□□□ -0.42
PCDHGA1-201ENST00000378105 CYP46A1Q9Y6A2 500 aa12.45□□□□□ -0.42
PCDHGA1-201ENST00000378105 BRD1O95696 1058 aa12.45□□□□□ -0.42
PCDHGA1-201ENST00000378105 MYBL2P10244 700 aa12.45□□□□□ -0.42
PCDHGA1-201ENST00000378105 NAT1P18440 290 aa12.45□□□□□ -0.42
PCDHGA1-201ENST00000378105 TIMM10P62072 90 aa12.45□□□□□ -0.42
PCDHGA1-201ENST00000378105 OTUD7AQ8TE49 926 aaPredicted RBP12.45□□□□□ -0.42
PCDHGA1-201ENST00000378105 NUP133Q8WUM0 1156 aa12.45□□□□□ -0.42
PCDHGA1-201ENST00000378105 METTL22Q9BUU2 404 aaPredicted RBP12.45□□□□□ -0.42
PCDHGA1-201ENST00000378105 PNMA6EA0A0J9YXQ4 647 aa12.45□□□□□ -0.42
PCDHGA1-201ENST00000378105 EIF3CLB5ME19 914 aaKnown RBP12.45□□□□□ -0.42
PCDHGA1-201ENST00000378105 BLOC1S2Q6QNY1 142 aa12.45□□□□□ -0.42
PCDHGA1-201ENST00000378105 EIF3CQ99613 913 aaKnown RBP12.45□□□□□ -0.42
PCDHGA1-201ENST00000378105 YIPF2Q9BWQ6 316 aa12.45□□□□□ -0.42
PCDHGA1-201ENST00000378105 ATG3Q9NT62 314 aa12.45□□□□□ -0.42
PCDHGA1-201ENST00000378105 UVSSAQ2YD98 709 aa12.44□□□□□ -0.42
PCDHGA1-201ENST00000378105 ZSCAN25Q6NSZ9 544 aa12.44□□□□□ -0.42
PCDHGA1-201ENST00000378105 TBC1D9Q6ZT07 1266 aa12.44□□□□□ -0.42
PCDHGA1-201ENST00000378105 F8W031 263 aaPredicted RBP12.44□□□□□ -0.42
PCDHGA1-201ENST00000378105 PDE1AP54750 535 aa12.44□□□□□ -0.42
PCDHGA1-201ENST00000378105 HAND2P61296 217 aa12.44□□□□□ -0.42
PCDHGA1-201ENST00000378105 NUCB1Q02818 461 aa12.44□□□□□ -0.42
PCDHGA1-201ENST00000378105 RABEP1Q15276 862 aa12.44□□□□□ -0.42
PCDHGA1-201ENST00000378105 LOC102724428A0A0B4J2F2 783 aa12.44□□□□□ -0.42
PCDHGA1-201ENST00000378105 SIK1P57059 783 aa12.44□□□□□ -0.42
PCDHGA1-201ENST00000378105 MSL1Q68DK7 614 aa12.44□□□□□ -0.42
PCDHGA1-201ENST00000378105 PARD3BQ8TEW8 1205 aa12.44□□□□□ -0.42
PCDHGA1-201ENST00000378105 BSDC1Q9NW68 430 aaPredicted RBP12.44□□□□□ -0.42
PCDHGA1-201ENST00000378105 SPEF2Q9C093 1822 aa12.44□□□□□ -0.42
PCDHGA1-201ENST00000378105 PPFIA3O75145 1194 aa12.43□□□□□ -0.42
PCDHGA1-201ENST00000378105 FAM163BP0C2L3 166 aa12.43□□□□□ -0.42
PCDHGA1-201ENST00000378105 SDSP20132 328 aa12.43□□□□□ -0.42
PCDHGA1-201ENST00000378105 N4BP2L2Q92802 583 aaPredicted RBP12.43□□□□□ -0.42
PCDHGA1-201ENST00000378105 FAXDC2Q96IV6 333 aa12.43□□□□□ -0.42
PCDHGA1-201ENST00000378105 ZBTB1Q9Y2K1 713 aa12.43□□□□□ -0.42
PCDHGA1-201ENST00000378105 TFCP2Q12800 502 aa12.43□□□□□ -0.42
PCDHGA1-201ENST00000378105 MAP3K12Q12852 859 aa12.43□□□□□ -0.42
PCDHGA1-201ENST00000378105 RPUSD2Q8IZ73 545 aaKnown RBP12.43□□□□□ -0.42
PCDHGA1-201ENST00000378105 KCNV2Q8TDN2 545 aa12.43□□□□□ -0.42
PCDHGA1-201ENST00000378105 COQ9O75208 318 aa12.43□□□□□ -0.42
PCDHGA1-201ENST00000378105 CASTP20810 708 aaKnown RBP12.43□□□□□ -0.42
PCDHGA1-201ENST00000378105 GPS2Q13227 327 aa12.43□□□□□ -0.42
PCDHGA1-201ENST00000378105 GBP6Q6ZN66 633 aa12.43□□□□□ -0.42
PCDHGA1-201ENST00000378105 DRC7Q8IY82 874 aa12.43□□□□□ -0.42
PCDHGA1-201ENST00000378105 SUCLG2Q96I99 432 aa12.43□□□□□ -0.42
PCDHGA1-201ENST00000378105 SH3TC1Q8TE82 1336 aa12.43□□□□□ -0.42
PCDHGA1-201ENST00000378105 PSME4Q14997 1843 aa12.42□□□□□ -0.42
PCDHGA1-201ENST00000378105 CTIFO43310 598 aaKnown RBP12.42□□□□□ -0.42
PCDHGA1-201ENST00000378105 ONECUT3O60422 494 aaPredicted RBP12.42□□□□□ -0.42
PCDHGA1-201ENST00000378105 BAG4O95429 457 aaKnown RBP12.42□□□□□ -0.42
PCDHGA1-201ENST00000378105 HOXB7P09629 217 aa12.42□□□□□ -0.42
PCDHGA1-201ENST00000378105 GCKP35557 465 aa12.42□□□□□ -0.42
PCDHGA1-201ENST00000378105 UNC5CLQ8IV45 518 aa12.42□□□□□ -0.42
PCDHGA1-201ENST00000378105 CERKQ8TCT0 537 aa12.42□□□□□ -0.42
PCDHGA1-201ENST00000378105 CENPOQ9BU64 300 aa12.42□□□□□ -0.42
PCDHGA1-201ENST00000378105 ZNF215Q9UL58 517 aaPredicted RBP12.42□□□□□ -0.42
PCDHGA1-201ENST00000378105 ENO4A6NNW6 628 aa12.42□□□□□ -0.42
PCDHGA1-201ENST00000378105 ADCY5O95622 1261 aa12.42□□□□□ -0.42
PCDHGA1-201ENST00000378105 ZRSR2Q15696 482 aaKnown RBP12.42□□□□□ -0.42
PCDHGA1-201ENST00000378105 PHC3Q8NDX5 983 aa12.42□□□□□ -0.42
PCDHGA1-201ENST00000378105 ZNF397Q8NF99 534 aaPredicted RBP12.42□□□□□ -0.42
PCDHGA1-201ENST00000378105 ERCC4Q92889 916 aaPredicted RBP12.42□□□□□ -0.42
PCDHGA1-201ENST00000378105 BABAM1Q9NWV8 329 aa12.42□□□□□ -0.42
PCDHGA1-201ENST00000378105 MAGEA9P43362 315 aa12.42□□□□□ -0.42
PCDHGA1-201ENST00000378105 USP5P45974 858 aa12.42□□□□□ -0.42
PCDHGA1-201ENST00000378105 CEBPZQ03701 1054 aaKnown RBP12.42□□□□□ -0.42
PCDHGA1-201ENST00000378105 GCKRQ14397 625 aa12.42□□□□□ -0.42
PCDHGA1-201ENST00000378105 MMS22LQ6ZRQ5 1243 aa12.42□□□□□ -0.42
PCDHGA1-201ENST00000378105 SEPT12Q8IYM1 358 aa12.42□□□□□ -0.42
PCDHGA1-201ENST00000378105 CCDC82Q8N4S0 544 aa12.42□□□□□ -0.42
PCDHGA1-201ENST00000378105 PIGBQ92521 554 aa12.42□□□□□ -0.42
PCDHGA1-201ENST00000378105 DCTPP1Q9H773 170 aa12.42□□□□□ -0.42
PCDHGA1-201ENST00000378105 ANAPC4Q9UJX5 808 aa12.42□□□□□ -0.42
PCDHGA1-201ENST00000378105 NDUFB9Q9Y6M9 179 aa12.42□□□□□ -0.42
PCDHGA1-201ENST00000378105 CCDC196A0A1B0GTZ2 297 aa12.42□□□□□ -0.42
PCDHGA1-201ENST00000378105 TTC22Q5TAA0 569 aa12.42□□□□□ -0.42
PCDHGA1-201ENST00000378105 LRP10Q7Z4F1 713 aa12.42□□□□□ -0.42
PCDHGA1-201ENST00000378105 MIEF2Q96C03 454 aa12.42□□□□□ -0.42
PCDHGA1-201ENST00000378105 NAPBQ9H115 298 aa12.42□□□□□ -0.42
PCDHGA1-201ENST00000378105 ATP6V1DQ9Y5K8 247 aa12.42□□□□□ -0.42
PCDHGA1-201ENST00000378105 SLC3A2P08195 630 aaKnown RBP12.41□□□□□ -0.42
PCDHGA1-201ENST00000378105 HMGB2P26583 209 aaKnown RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms