RNA–Protein interactions for RNA: ENST00000377142.4

NKX2-2-201, Transcript of NK2 homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX2-2, Length 2,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2-201ENST00000377142 CCDC183Q5T5S1 534 aa20.53■□□□□ 0.88
NKX2-2-201ENST00000377142 LEMD3Q9Y2U8 911 aa20.53■□□□□ 0.88
NKX2-2-201ENST00000377142 IRS2Q9Y4H2 1338 aa20.53■□□□□ 0.88
NKX2-2-201ENST00000377142 MFSD6Q6ZSS7 791 aa20.52■□□□□ 0.88
NKX2-2-201ENST00000377142 RPGRQ92834 1020 aaKnown RBP20.52■□□□□ 0.88
NKX2-2-201ENST00000377142 RIOK1Q9BRS2 568 aaKnown RBP20.52■□□□□ 0.88
NKX2-2-201ENST00000377142 XDHP47989 1333 aa20.52■□□□□ 0.88
NKX2-2-201ENST00000377142 CTDSPL2Q05D32 466 aa20.52■□□□□ 0.87
NKX2-2-201ENST00000377142 CRY2Q49AN0 593 aa20.52■□□□□ 0.87
NKX2-2-201ENST00000377142 TTC6Q86TZ1 520 aa20.52■□□□□ 0.87
NKX2-2-201ENST00000377142 RNF41Q9H4P4 317 aaPredicted RBP20.52■□□□□ 0.87
NKX2-2-201ENST00000377142 TFCP2L1Q9NZI6 479 aa20.52■□□□□ 0.87
NKX2-2-201ENST00000377142 CPLX1O14810 134 aa20.51■□□□□ 0.87
NKX2-2-201ENST00000377142 IGSF3O75054 1194 aa20.51■□□□□ 0.87
NKX2-2-201ENST00000377142 SERPINB2P05120 415 aa20.51■□□□□ 0.87
NKX2-2-201ENST00000377142 NASPP49321 788 aaPredicted RBP20.51■□□□□ 0.87
NKX2-2-201ENST00000377142 TXNRD1Q16881 649 aa20.51■□□□□ 0.87
NKX2-2-201ENST00000377142 FAM173BQ6P4H8 233 aa20.51■□□□□ 0.87
NKX2-2-201ENST00000377142 SGMS1Q86VZ5 419 aa20.51■□□□□ 0.87
NKX2-2-201ENST00000377142 LETM1O95202 739 aaPredicted RBP20.5■□□□□ 0.87
NKX2-2-201ENST00000377142 RBM6P78332 1123 aaKnown RBP20.5■□□□□ 0.87
NKX2-2-201ENST00000377142 KLHL34Q8N239 644 aa20.5■□□□□ 0.87
NKX2-2-201ENST00000377142 MTA3Q9BTC8 594 aa20.5■□□□□ 0.87
NKX2-2-201ENST00000377142 ANKIB1Q9P2G1 1089 aa20.5■□□□□ 0.87
NKX2-2-201ENST00000377142 LIFRP42702 1097 aa20.5■□□□□ 0.87
NKX2-2-201ENST00000377142 ZNF772Q68DY9 489 aaPredicted RBP20.5■□□□□ 0.87
NKX2-2-201ENST00000377142 IGDCC4Q8TDY8 1250 aa20.5■□□□□ 0.87
NKX2-2-201ENST00000377142 NSUN4Q96CB9 384 aaKnown RBP20.5■□□□□ 0.87
NKX2-2-201ENST00000377142 SPATA32Q96LK8 384 aa20.5■□□□□ 0.87
NKX2-2-201ENST00000377142 ANAPC4Q9UJX5 808 aa20.5■□□□□ 0.87
NKX2-2-201ENST00000377142 FDPSP14324 419 aaKnown RBP20.49■□□□□ 0.87
NKX2-2-201ENST00000377142 METAP2P50579 478 aaKnown RBP eCLIP20.49■□□□□ 0.87
NKX2-2-201ENST00000377142 PPARAQ07869 468 aa20.49■□□□□ 0.87
NKX2-2-201ENST00000377142 TMEM67Q5HYA8 995 aa20.49■□□□□ 0.87
NKX2-2-201ENST00000377142 APOA5Q6Q788 366 aa20.49■□□□□ 0.87
NKX2-2-201ENST00000377142 RGS22Q8NE09 1264 aa20.49■□□□□ 0.87
NKX2-2-201ENST00000377142 NKX2-3Q8TAU0 364 aa20.49■□□□□ 0.87
NKX2-2-201ENST00000377142 BRIP1Q9BX63 1249 aa20.49■□□□□ 0.87
NKX2-2-201ENST00000377142 LY9Q9HBG7 655 aa20.49■□□□□ 0.87
NKX2-2-201ENST00000377142 CFAP45Q9UL16 551 aa20.49■□□□□ 0.87
NKX2-2-201ENST00000377142 DUOX1Q9NRD9 1551 aa20.49■□□□□ 0.87
NKX2-2-201ENST00000377142 LAMB1P07942 1786 aa20.49■□□□□ 0.87
NKX2-2-201ENST00000377142 KDM4AO75164 1064 aa20.49■□□□□ 0.87
NKX2-2-201ENST00000377142 CDKL5O76039 1030 aa20.49■□□□□ 0.87
NKX2-2-201ENST00000377142 GIMAP6Q6P9H5 292 aa20.49■□□□□ 0.87
NKX2-2-201ENST00000377142 SDR42E1Q8WUS8 393 aa20.49■□□□□ 0.87
NKX2-2-201ENST00000377142 LEO1Q8WVC0 666 aaPredicted RBP20.49■□□□□ 0.87
NKX2-2-201ENST00000377142 MECOMQ03112 1051 aa20.48■□□□□ 0.87
NKX2-2-201ENST00000377142 SART3Q15020 963 aaKnown RBP20.48■□□□□ 0.87
NKX2-2-201ENST00000377142 SPTY2D1Q68D10 685 aaPredicted RBP20.48■□□□□ 0.87
NKX2-2-201ENST00000377142 ATL3Q6DD88 541 aa20.48■□□□□ 0.87
NKX2-2-201ENST00000377142 C15orf52Q6ZUT6 534 aaKnown RBP20.48■□□□□ 0.87
NKX2-2-201ENST00000377142 ZNF384Q8TF68 577 aa20.48■□□□□ 0.87
NKX2-2-201ENST00000377142 RBM17Q96I25 401 aaKnown RBP20.48■□□□□ 0.87
NKX2-2-201ENST00000377142 ZSWIM5Q9P217 1185 aa20.48■□□□□ 0.87
NKX2-2-201ENST00000377142 BAZ2AQ9UIF9 1905 aaKnown RBP20.48■□□□□ 0.87
NKX2-2-201ENST00000377142 CHAF1AQ13111 956 aaPredicted RBP20.47■□□□□ 0.87
NKX2-2-201ENST00000377142 CPLX2Q6PUV4 134 aaKnown RBP20.47■□□□□ 0.87
NKX2-2-201ENST00000377142 NFXL1Q6ZNB6 911 aa20.47■□□□□ 0.87
NKX2-2-201ENST00000377142 TXNRD3Q86VQ6 643 aa20.47■□□□□ 0.87
NKX2-2-201ENST00000377142 ORC3Q9UBD5 711 aaPredicted RBP20.47■□□□□ 0.87
NKX2-2-201ENST00000377142 TACC3Q9Y6A5 838 aa20.47■□□□□ 0.87
NKX2-2-201ENST00000377142 NID2Q14112 1375 aa20.47■□□□□ 0.87
NKX2-2-201ENST00000377142 LRRC37AA6NMS7 1700 aa20.47■□□□□ 0.87
NKX2-2-201ENST00000377142 IFIT3O14879 490 aaKnown RBP20.47■□□□□ 0.87
NKX2-2-201ENST00000377142 ZBTB43O43298 467 aa20.47■□□□□ 0.87
NKX2-2-201ENST00000377142 FOSBP53539 338 aa20.47■□□□□ 0.87
NKX2-2-201ENST00000377142 ANP32BQ92688 251 aaKnown RBP20.47■□□□□ 0.87
NKX2-2-201ENST00000377142 RBSNQ9H1K0 784 aa20.47■□□□□ 0.87
NKX2-2-201ENST00000377142 TSPY26PQ9H489 355 aa20.47■□□□□ 0.87
NKX2-2-201ENST00000377142 ECM29Q5VYK3 1845 aa20.46■□□□□ 0.87
NKX2-2-201ENST00000377142 DYNLL1P63167 89 aaKnown RBP20.46■□□□□ 0.87
NKX2-2-201ENST00000377142 ZNF804AQ7Z570 1209 aa20.46■□□□□ 0.87
NKX2-2-201ENST00000377142 PROM2Q8N271 834 aa20.46■□□□□ 0.87
NKX2-2-201ENST00000377142 C8orf76Q96K31 380 aa20.46■□□□□ 0.87
NKX2-2-201ENST00000377142 INCENPQ9NQS7 918 aa20.46■□□□□ 0.87
NKX2-2-201ENST00000377142 TFIP11Q9UBB9 837 aaKnown RBP20.46■□□□□ 0.87
NKX2-2-201ENST00000377142 EP400Q96L91 3159 aa20.46■□□□□ 0.87
NKX2-2-201ENST00000377142 POLRMTO00411 1230 aaKnown RBP20.46■□□□□ 0.87
NKX2-2-201ENST00000377142 DDR1Q08345 913 aa20.46■□□□□ 0.87
NKX2-2-201ENST00000377142 RAB11FIP4Q86YS3 637 aa20.46■□□□□ 0.87
NKX2-2-201ENST00000377142 WDR66Q8TBY9 1149 aa20.46■□□□□ 0.87
NKX2-2-201ENST00000377142 TOMM22Q9NS69 142 aa20.46■□□□□ 0.87
NKX2-2-201ENST00000377142 GOLGA6L4A6NEF3 574 aa20.45■□□□□ 0.86
NKX2-2-201ENST00000377142 CCDC69A6NI79 296 aa20.45■□□□□ 0.86
NKX2-2-201ENST00000377142 PCP11498 1178 aaKnown RBP20.45■□□□□ 0.86
NKX2-2-201ENST00000377142 PRDX5P30044 214 aa20.45■□□□□ 0.86
NKX2-2-201ENST00000377142 RRP12Q5JTH9 1297 aaKnown RBP20.45■□□□□ 0.86
NKX2-2-201ENST00000377142 MICU3Q86XE3 530 aa20.45■□□□□ 0.86
NKX2-2-201ENST00000377142 ZNF396Q96N95 335 aaPredicted RBP20.45■□□□□ 0.86
NKX2-2-201ENST00000377142 NRXN2Q9P2S2 1712 aa20.45■□□□□ 0.86
NKX2-2-201ENST00000377142 ERICH2A1L162 156 aa20.44■□□□□ 0.86
NKX2-2-201ENST00000377142 GOLGA8AA7E2F4 631 aa20.44■□□□□ 0.86
NKX2-2-201ENST00000377142 PLSCR1O15162 318 aa20.44■□□□□ 0.86
NKX2-2-201ENST00000377142 HOXA10P31260 410 aaPredicted RBP20.44■□□□□ 0.86
NKX2-2-201ENST00000377142 TDRD7Q8NHU6 1098 aaKnown RBP20.44■□□□□ 0.86
NKX2-2-201ENST00000377142 CRNKL1Q9BZJ0 848 aaKnown RBP20.44■□□□□ 0.86
NKX2-2-201ENST00000377142 SLC12A7Q9Y666 1083 aa20.44■□□□□ 0.86
NKX2-2-201ENST00000377142 MINDY4BA8MYZ0 360 aa20.44■□□□□ 0.86
NKX2-2-201ENST00000377142 PPFIA3O75145 1194 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms