RNA–Protein interactions for RNA: ENST00000376957.6

SRM-201, Transcript of spermidine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRM, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-201ENST00000376957 RHPN1Q8TCX5 695 aa27.06■■□□□ 1.92
SRM-201ENST00000376957 TMEM39BQ9GZU3 492 aa27.06■■□□□ 1.92
SRM-201ENST00000376957 CCDC8Q9H0W5 538 aaPredicted RBP27.06■■□□□ 1.92
SRM-201ENST00000376957 USP40Q9NVE5 1235 aa27.06■■□□□ 1.92
SRM-201ENST00000376957 AOX1Q06278 1338 aa27.06■■□□□ 1.92
SRM-201ENST00000376957 MCAMP43121 646 aa27.05■■□□□ 1.92
SRM-201ENST00000376957 CACNB3P54284 484 aa27.05■■□□□ 1.92
SRM-201ENST00000376957 LDLRAD1Q5T700 205 aa27.05■■□□□ 1.92
SRM-201ENST00000376957 ANKRD13AQ8IZ07 590 aa27.05■■□□□ 1.92
SRM-201ENST00000376957 FAM163AQ96GL9 167 aaPredicted RBP27.05■■□□□ 1.92
SRM-201ENST00000376957 NOL10Q9BSC4 688 aaKnown RBP27.05■■□□□ 1.92
SRM-201ENST00000376957 PRDM10Q9NQV6 1147 aa27.05■■□□□ 1.92
SRM-201ENST00000376957 PCNTO95613 3336 aa27.04■■□□□ 1.92
SRM-201ENST00000376957 DCAF15Q66K64 600 aa27.04■■□□□ 1.92
SRM-201ENST00000376957 CDC42EP5Q6NZY7 148 aa27.04■■□□□ 1.92
SRM-201ENST00000376957 EAF2Q96CJ1 260 aaPredicted RBP27.04■■□□□ 1.92
SRM-201ENST00000376957 APBB1O00213 710 aa27.03■■□□□ 1.92
SRM-201ENST00000376957 IFIT2P09913 472 aaKnown RBP27.03■■□□□ 1.92
SRM-201ENST00000376957 MECOMQ03112 1051 aa27.03■■□□□ 1.92
SRM-201ENST00000376957 FAM151AQ8WW52 585 aa27.03■■□□□ 1.92
SRM-201ENST00000376957 DBNLQ9UJU6 430 aaKnown RBP27.03■■□□□ 1.92
SRM-201ENST00000376957 MYH2Q9UKX2 1941 aa27.03■■□□□ 1.92
SRM-201ENST00000376957 GAKO14976 1311 aa27.02■■□□□ 1.92
SRM-201ENST00000376957 MAP4K4O95819 1239 aaPredicted RBP27.02■■□□□ 1.92
SRM-201ENST00000376957 RRP1P56182 461 aaKnown RBP27.02■■□□□ 1.92
SRM-201ENST00000376957 SREBF2Q12772 1141 aa27.02■■□□□ 1.92
SRM-201ENST00000376957 TEPSINQ96N21 525 aa27.02■■□□□ 1.92
SRM-201ENST00000376957 MROH7-TTC4A0A0A0MT08 1334 aa27.01■■□□□ 1.91
SRM-201ENST00000376957 USP2O75604 605 aaPredicted RBP27.01■■□□□ 1.91
SRM-201ENST00000376957 PI16Q6UXB8 463 aa27.01■■□□□ 1.91
SRM-201ENST00000376957 TBC1D9Q6ZT07 1266 aa27.01■■□□□ 1.91
SRM-201ENST00000376957 SIRT2Q8IXJ6 389 aa27.01■■□□□ 1.91
SRM-201ENST00000376957 IL1RAPL2Q9NP60 686 aa27.01■■□□□ 1.91
SRM-201ENST00000376957 RPAP1Q9BWH6 1393 aaPredicted RBP27■■□□□ 1.91
SRM-201ENST00000376957 LBX1P52954 281 aa27■■□□□ 1.91
SRM-201ENST00000376957 SNRKQ9NRH2 765 aa27■■□□□ 1.91
SRM-201ENST00000376957 SAGE1Q9NXZ1 904 aa27■■□□□ 1.91
SRM-201ENST00000376957 CSADQ9Y600 493 aa27■■□□□ 1.91
SRM-201ENST00000376957 BAG3O95817 575 aa26.99■■□□□ 1.91
SRM-201ENST00000376957 ZBTB48P10074 688 aaPredicted RBP26.99■■□□□ 1.91
SRM-201ENST00000376957 BTDP43251 543 aa26.99■■□□□ 1.91
SRM-201ENST00000376957 TCP10Q12799 353 aa26.99■■□□□ 1.91
SRM-201ENST00000376957 NAA16Q6N069 864 aaPredicted RBP26.99■■□□□ 1.91
SRM-201ENST00000376957 NSUN4Q96CB9 384 aaKnown RBP26.99■■□□□ 1.91
SRM-201ENST00000376957 ZBTB4Q9P1Z0 1013 aaPredicted RBP26.99■■□□□ 1.91
SRM-201ENST00000376957 SSC5DA1L4H1 1573 aa26.98■■□□□ 1.91
SRM-201ENST00000376957 GPR75-ASB3A0A0A6YYF3 556 aa26.98■■□□□ 1.91
SRM-201ENST00000376957 ENTPD3O75355 529 aa26.98■■□□□ 1.91
SRM-201ENST00000376957 INHBEP58166 350 aa26.98■■□□□ 1.91
SRM-201ENST00000376957 TMED8Q6PL24 325 aaPredicted RBP26.98■■□□□ 1.91
SRM-201ENST00000376957 CSRNP1Q96S65 589 aa26.98■■□□□ 1.91
SRM-201ENST00000376957 IDI2Q9BXS1 227 aa26.98■■□□□ 1.91
SRM-201ENST00000376957 FZD1Q9UP38 647 aa26.98■■□□□ 1.91
SRM-201ENST00000376957 HSPA8P11142 646 aaKnown RBP26.97■■□□□ 1.91
SRM-201ENST00000376957 PLCG2P16885 1265 aa26.97■■□□□ 1.91
SRM-201ENST00000376957 MAP3K9P80192 1104 aa26.97■■□□□ 1.91
SRM-201ENST00000376957 COL13A1Q5TAT6 717 aaPredicted RBP26.97■■□□□ 1.91
SRM-201ENST00000376957 SPRYD7Q5W111 196 aa26.97■■□□□ 1.91
SRM-201ENST00000376957 ZIC5Q96T25 663 aa26.97■■□□□ 1.91
SRM-201ENST00000376957 LRRCC1Q9C099 1032 aa26.97■■□□□ 1.91
SRM-201ENST00000376957 BCL11AQ9H165 835 aa26.97■■□□□ 1.91
SRM-201ENST00000376957 TLR7Q9NYK1 1049 aaKnown RBP26.97■■□□□ 1.91
SRM-201ENST00000376957 AK9Q5TCS8 1911 aa26.96■■□□□ 1.91
SRM-201ENST00000376957 AKAP11Q9UKA4 1901 aa26.96■■□□□ 1.91
SRM-201ENST00000376957 MANSC4A6NHS7 340 aaPredicted RBP26.96■■□□□ 1.91
SRM-201ENST00000376957 TTF1Q15361 905 aaPredicted RBP26.96■■□□□ 1.91
SRM-201ENST00000376957 ZSCAN29Q8IWY8 852 aaPredicted RBP26.96■■□□□ 1.91
SRM-201ENST00000376957 CYP2E1P05181 493 aaPredicted RBP26.95■■□□□ 1.9
SRM-201ENST00000376957 ZAP70P43403 619 aa26.95■■□□□ 1.9
SRM-201ENST00000376957 MKRN3Q13064 507 aaKnown RBP26.95■■□□□ 1.9
SRM-201ENST00000376957 ZNF341Q9BYN7 854 aa26.95■■□□□ 1.9
SRM-201ENST00000376957 RGS3P49796 1198 aa26.94■■□□□ 1.9
SRM-201ENST00000376957 MAP3K12Q12852 859 aa26.94■■□□□ 1.9
SRM-201ENST00000376957 CERS3Q8IU89 383 aa26.94■■□□□ 1.9
SRM-201ENST00000376957 TNS4Q8IZW8 715 aa26.94■■□□□ 1.9
SRM-201ENST00000376957 TRPA1O75762 1119 aa26.93■■□□□ 1.9
SRM-201ENST00000376957 TM4SF4P48230 202 aa26.93■■□□□ 1.9
SRM-201ENST00000376957 NFIAQ12857 509 aa26.93■■□□□ 1.9
SRM-201ENST00000376957 CLMNQ96JQ2 1002 aa26.93■■□□□ 1.9
SRM-201ENST00000376957 RNF186Q9NXI6 227 aa26.93■■□□□ 1.9
SRM-201ENST00000376957 NPM3O75607 178 aaKnown RBP26.92■■□□□ 1.9
SRM-201ENST00000376957 IDH1O75874 414 aaKnown RBP26.92■■□□□ 1.9
SRM-201ENST00000376957 ALDH1A1P00352 501 aa26.92■■□□□ 1.9
SRM-201ENST00000376957 OTUD7BQ6GQQ9 843 aa26.92■■□□□ 1.9
SRM-201ENST00000376957 DDX55Q8NHQ9 600 aaKnown RBP eCLIP26.92■■□□□ 1.9
SRM-201ENST00000376957 PPIL4Q8WUA2 492 aaKnown RBP eCLIP26.92■■□□□ 1.9
SRM-201ENST00000376957 WNK4Q96J92 1243 aa26.92■■□□□ 1.9
SRM-201ENST00000376957 WRNIP1Q96S55 665 aa26.92■■□□□ 1.9
SRM-201ENST00000376957 FAM198AQ9UFP1 575 aa26.92■■□□□ 1.9
SRM-201ENST00000376957 PICALMQ13492 652 aa26.91■■□□□ 1.9
SRM-201ENST00000376957 AAMPQ13685 434 aa26.91■■□□□ 1.9
SRM-201ENST00000376957 CDAN1Q8IWY9 1227 aa26.91■■□□□ 1.9
SRM-201ENST00000376957 ELP3Q9H9T3 547 aa26.91■■□□□ 1.9
SRM-201ENST00000376957 TSKSQ9UJT2 592 aa26.91■■□□□ 1.9
SRM-201ENST00000376957 VGLL4Q14135 290 aa26.9■■□□□ 1.9
SRM-201ENST00000376957 MIGA2Q7L4E1 593 aa26.9■■□□□ 1.9
SRM-201ENST00000376957 OPTNQ96CV9 577 aa26.9■■□□□ 1.9
SRM-201ENST00000376957 ZBTB47Q9UFB7 747 aaPredicted RBP26.9■■□□□ 1.9
SRM-201ENST00000376957 PPP1R3FQ6ZSY5 799 aaPredicted RBP26.89■■□□□ 1.9
SRM-201ENST00000376957 TEX11Q8IYF3 940 aa26.89■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms