RNA–Protein interactions for RNA: ENST00000375850.3

C9orf47-202, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene C9orf47, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-202ENST00000375850 API5Q9BZZ5 524 aaKnown RBP28.93■■■□□ 2.22
C9orf47-202ENST00000375850 PPATQ06203 517 aa28.92■■■□□ 2.22
C9orf47-202ENST00000375850 ATP2B3Q16720 1220 aa28.92■■■□□ 2.22
C9orf47-202ENST00000375850 FAM43AQ8N2R8 423 aa28.92■■■□□ 2.22
C9orf47-202ENST00000375850 NBPF11Q86T75 865 aa28.91■■■□□ 2.22
C9orf47-202ENST00000375850 GCC1Q96CN9 775 aa28.91■■■□□ 2.22
C9orf47-202ENST00000375850 SALL1Q9NSC2 1324 aa28.91■■■□□ 2.22
C9orf47-202ENST00000375850 TLR2O60603 784 aa28.9■■■□□ 2.22
C9orf47-202ENST00000375850 GNRH1P01148 92 aa28.9■■■□□ 2.22
C9orf47-202ENST00000375850 IL15P40933 162 aaPredicted RBP28.9■■■□□ 2.22
C9orf47-202ENST00000375850 KIF22Q14807 665 aa28.9■■■□□ 2.22
C9orf47-202ENST00000375850 ZKSCAN4Q969J2 545 aaPredicted RBP28.9■■■□□ 2.22
C9orf47-202ENST00000375850 DENND2AQ9ULE3 1009 aa28.9■■■□□ 2.22
C9orf47-202ENST00000375850 IRF6O14896 467 aa28.89■■■□□ 2.22
C9orf47-202ENST00000375850 LDHBP07195 334 aaKnown RBP28.89■■■□□ 2.22
C9orf47-202ENST00000375850 ZGPATQ8N5A5 531 aaKnown RBP28.89■■■□□ 2.22
C9orf47-202ENST00000375850 TMEM106CQ9BVX2 250 aa28.89■■■□□ 2.22
C9orf47-202ENST00000375850 DAGLAQ9Y4D2 1042 aa28.89■■■□□ 2.22
C9orf47-202ENST00000375850 HTTP42858 3142 aa28.88■■■□□ 2.21
C9orf47-202ENST00000375850 CDCA7LQ96GN5 454 aa28.88■■■□□ 2.21
C9orf47-202ENST00000375850 POTEFA5A3E0 1075 aa28.87■■■□□ 2.21
C9orf47-202ENST00000375850 CDC42EP5Q6NZY7 148 aa28.87■■■□□ 2.21
C9orf47-202ENST00000375850 SIL1Q9H173 461 aa28.87■■■□□ 2.21
C9orf47-202ENST00000375850 ZNF112Q9UJU3 913 aa28.87■■■□□ 2.21
C9orf47-202ENST00000375850 BTBD19C9JJ37 291 aa28.86■■■□□ 2.21
C9orf47-202ENST00000375850 PRMT2P55345 433 aa28.86■■■□□ 2.21
C9orf47-202ENST00000375850 SLC9C1Q4G0N8 1177 aa28.86■■■□□ 2.21
C9orf47-202ENST00000375850 ZNF333Q96JL9 665 aa28.86■■■□□ 2.21
C9orf47-202ENST00000375850 COPRSQ9NQ92 184 aa28.86■■■□□ 2.21
C9orf47-202ENST00000375850 NOB1Q9ULX3 412 aaKnown RBP28.86■■■□□ 2.21
C9orf47-202ENST00000375850 PRDX5P30044 214 aa28.85■■■□□ 2.21
C9orf47-202ENST00000375850 MIGA2Q7L4E1 593 aa28.85■■■□□ 2.21
C9orf47-202ENST00000375850 DIXDC1Q155Q3 683 aa28.84■■■□□ 2.21
C9orf47-202ENST00000375850 ANKRD23Q86SG2 305 aa28.84■■■□□ 2.21
C9orf47-202ENST00000375850 LRRFIP2Q9Y608 721 aaKnown RBP28.84■■■□□ 2.21
C9orf47-202ENST00000375850 RBBP6Q7Z6E9 1792 aaKnown RBP28.83■■■□□ 2.21
C9orf47-202ENST00000375850 LACTBP83111 547 aaPredicted RBP28.83■■■□□ 2.21
C9orf47-202ENST00000375850 CAP1Q01518 475 aa28.83■■■□□ 2.21
C9orf47-202ENST00000375850 NOL9Q5SY16 702 aaKnown RBP28.83■■■□□ 2.21
C9orf47-202ENST00000375850 SLF2Q8IX21 1173 aa28.83■■■□□ 2.21
C9orf47-202ENST00000375850 KCNH4Q9UQ05 1017 aa28.83■■■□□ 2.21
C9orf47-202ENST00000375850 PTCH2Q9Y6C5 1203 aa28.83■■■□□ 2.21
C9orf47-202ENST00000375850 PDS5AQ29RF7 1337 aaKnown RBP28.83■■■□□ 2.21
C9orf47-202ENST00000375850 INPP5BP32019 993 aa28.82■■■□□ 2.2
C9orf47-202ENST00000375850 TCP10Q12799 353 aa28.82■■■□□ 2.2
C9orf47-202ENST00000375850 ARHGAP45Q92619 1136 aa28.82■■■□□ 2.2
C9orf47-202ENST00000375850 USP40Q9NVE5 1235 aa28.82■■■□□ 2.2
C9orf47-202ENST00000375850 ENTPD3O75355 529 aa28.8■■■□□ 2.2
C9orf47-202ENST00000375850 GNAI3P08754 354 aa28.8■■■□□ 2.2
C9orf47-202ENST00000375850 PHKA1P46020 1223 aa28.8■■■□□ 2.2
C9orf47-202ENST00000375850 NFIAQ12857 509 aa28.8■■■□□ 2.2
C9orf47-202ENST00000375850 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.8■■■□□ 2.2
C9orf47-202ENST00000375850 IDI2Q9BXS1 227 aa28.8■■■□□ 2.2
C9orf47-202ENST00000375850 FAM198AQ9UFP1 575 aa28.8■■■□□ 2.2
C9orf47-202ENST00000375850 AKAP2Q9Y2D5 859 aa28.8■■■□□ 2.2
C9orf47-202ENST00000375850 MYH13Q9UKX3 1938 aa28.8■■■□□ 2.2
C9orf47-202ENST00000375850 SPTY2D1Q68D10 685 aaPredicted RBP28.79■■■□□ 2.2
C9orf47-202ENST00000375850 CCDC102BQ68D86 513 aa28.79■■■□□ 2.2
C9orf47-202ENST00000375850 C17orf99Q6UX52 265 aa28.79■■■□□ 2.2
C9orf47-202ENST00000375850 GAKO14976 1311 aa28.78■■■□□ 2.2
C9orf47-202ENST00000375850 CXCL11O14625 94 aa28.78■■■□□ 2.2
C9orf47-202ENST00000375850 EN2P19622 333 aaPredicted RBP28.78■■■□□ 2.2
C9orf47-202ENST00000375850 HOXD10P28358 340 aa28.77■■■□□ 2.2
C9orf47-202ENST00000375850 DZIP1Q86YF9 867 aaKnown RBP28.77■■■□□ 2.2
C9orf47-202ENST00000375850 FAM163AQ96GL9 167 aaPredicted RBP28.77■■■□□ 2.2
C9orf47-202ENST00000375850 MEIS3Q99687 375 aa28.77■■■□□ 2.2
C9orf47-202ENST00000375850 PA2G4Q9UQ80 394 aaKnown RBP28.77■■■□□ 2.2
C9orf47-202ENST00000375850 PDHXO00330 501 aa28.76■■■□□ 2.19
C9orf47-202ENST00000375850 RARSP54136 660 aaKnown RBP28.76■■■□□ 2.19
C9orf47-202ENST00000375850 MTX1Q13505 466 aa28.76■■■□□ 2.19
C9orf47-202ENST00000375850 MVPQ14764 893 aaKnown RBP28.76■■■□□ 2.19
C9orf47-202ENST00000375850 SLC4A8Q2Y0W8 1093 aa28.76■■■□□ 2.19
C9orf47-202ENST00000375850 PARK7Q99497 189 aaKnown RBP28.75■■■□□ 2.19
C9orf47-202ENST00000375850 KIAA0100Q14667 2235 aaKnown RBP28.75■■■□□ 2.19
C9orf47-202ENST00000375850 CCER2I3L3R5 266 aa28.74■■■□□ 2.19
C9orf47-202ENST00000375850 RASGRF1Q13972 1273 aa28.74■■■□□ 2.19
C9orf47-202ENST00000375850 ARHGAP39Q9C0H5 1083 aa28.74■■■□□ 2.19
C9orf47-202ENST00000375850 IPO8O15397 1037 aaKnown RBP28.73■■■□□ 2.19
C9orf47-202ENST00000375850 SRGAP3O43295 1099 aa28.73■■■□□ 2.19
C9orf47-202ENST00000375850 ADORA1P30542 326 aa28.73■■■□□ 2.19
C9orf47-202ENST00000375850 RGS3P49796 1198 aa28.73■■■□□ 2.19
C9orf47-202ENST00000375850 FASTKD5Q7L8L6 764 aaKnown RBP28.73■■■□□ 2.19
C9orf47-202ENST00000375850 SCYL3Q8IZE3 742 aa28.73■■■□□ 2.19
C9orf47-202ENST00000375850 PICK1Q9NRD5 415 aa28.73■■■□□ 2.19
C9orf47-202ENST00000375850 ATRNL1Q5VV63 1379 aa28.73■■■□□ 2.19
C9orf47-202ENST00000375850 A0A1B0GUL7 405 aa28.72■■■□□ 2.19
C9orf47-202ENST00000375850 MAP3K10Q02779 954 aa28.72■■■□□ 2.19
C9orf47-202ENST00000375850 ABCF2Q9UG63 623 aa28.72■■■□□ 2.19
C9orf47-202ENST00000375850 SRRDQ9UH36 339 aa28.72■■■□□ 2.19
C9orf47-202ENST00000375850 CPA4Q9UI42 421 aa28.72■■■□□ 2.19
C9orf47-202ENST00000375850 RFX7Q2KHR2 1363 aa28.72■■■□□ 2.19
C9orf47-202ENST00000375850 ADGRA2Q96PE1 1338 aa28.71■■■□□ 2.19
C9orf47-202ENST00000375850 PHF20L1A8MW92 1017 aa28.71■■■□□ 2.19
C9orf47-202ENST00000375850 MAP4K4O95819 1239 aaPredicted RBP28.71■■■□□ 2.19
C9orf47-202ENST00000375850 PSMC4P43686 418 aa28.71■■■□□ 2.19
C9orf47-202ENST00000375850 TIMM10P62072 90 aa28.71■■■□□ 2.19
C9orf47-202ENST00000375850 MOGSQ13724 837 aa28.71■■■□□ 2.19
C9orf47-202ENST00000375850 CENPFP49454 3210 aa28.7■■■□□ 2.19
C9orf47-202ENST00000375850 ZSCAN29Q8IWY8 852 aaPredicted RBP28.7■■■□□ 2.18
C9orf47-202ENST00000375850 ZFPM1Q8IX07 1006 aa28.7■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 131.7 ms