RNA–Protein interactions for RNA: ENST00000373839.7

PHACTR4-202, Transcript of phosphatase and actin regulator 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHACTR4, Length 6,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-202ENST00000373839 APOBRQ0VD83 1088 aa12.48□□□□□ -0.41
PHACTR4-202ENST00000373839 TNNI3KQ59H18 835 aa12.48□□□□□ -0.41
PHACTR4-202ENST00000373839 CNNM4Q6P4Q7 775 aa12.48□□□□□ -0.41
PHACTR4-202ENST00000373839 KRT25Q7Z3Z0 450 aa12.48□□□□□ -0.41
PHACTR4-202ENST00000373839 GOLGA1Q92805 767 aa12.48□□□□□ -0.41
PHACTR4-202ENST00000373839 LUC7L2Q9Y383 392 aaKnown RBP12.48□□□□□ -0.41
PHACTR4-202ENST00000373839 FPGT-TNNI3KV9GXZ4 949 aa12.48□□□□□ -0.41
PHACTR4-202ENST00000373839 CTAGE9A4FU28 777 aa12.48□□□□□ -0.41
PHACTR4-202ENST00000373839 TCIRG1Q13488 830 aa12.48□□□□□ -0.41
PHACTR4-202ENST00000373839 USP48Q86UV5 1035 aa12.48□□□□□ -0.41
PHACTR4-202ENST00000373839 CALCOCO1Q9P1Z2 691 aa12.48□□□□□ -0.41
PHACTR4-202ENST00000373839 CHMLP26374 656 aa12.48□□□□□ -0.41
PHACTR4-202ENST00000373839 STRN3Q13033 797 aa12.48□□□□□ -0.41
PHACTR4-202ENST00000373839 AOPEPQ8N6M6 819 aa12.48□□□□□ -0.41
PHACTR4-202ENST00000373839 NAP1L3Q99457 506 aaPredicted RBP12.48□□□□□ -0.41
PHACTR4-202ENST00000373839 ERVV-2B6SEH9 535 aa12.47□□□□□ -0.41
PHACTR4-202ENST00000373839 HAUS2Q9NVX0 235 aa12.47□□□□□ -0.41
PHACTR4-202ENST00000373839 HACE1Q8IYU2 909 aa12.47□□□□□ -0.41
PHACTR4-202ENST00000373839 GIMAP7Q8NHV1 300 aa12.47□□□□□ -0.41
PHACTR4-202ENST00000373839 ZBTB40Q9NUA8 1239 aa12.47□□□□□ -0.41
PHACTR4-202ENST00000373839 KIAA0556O60303 1618 aa12.47□□□□□ -0.41
PHACTR4-202ENST00000373839 NOP56O00567 594 aaKnown RBP12.47□□□□□ -0.41
PHACTR4-202ENST00000373839 ARID4AP29374 1257 aaPredicted RBP12.47□□□□□ -0.41
PHACTR4-202ENST00000373839 AK2P54819 239 aa12.47□□□□□ -0.41
PHACTR4-202ENST00000373839 TNNC1P63316 161 aa12.47□□□□□ -0.41
PHACTR4-202ENST00000373839 FAM89AQ96GI7 184 aa12.47□□□□□ -0.41
PHACTR4-202ENST00000373839 PSMD1Q99460 953 aa12.47□□□□□ -0.41
PHACTR4-202ENST00000373839 ZRANB1Q9UGI0 708 aa12.47□□□□□ -0.41
PHACTR4-202ENST00000373839 PPFIA3O75145 1194 aa12.47□□□□□ -0.41
PHACTR4-202ENST00000373839 CCT6AP40227 531 aaKnown RBP12.47□□□□□ -0.41
PHACTR4-202ENST00000373839 CCDC50Q8IVM0 306 aa12.47□□□□□ -0.41
PHACTR4-202ENST00000373839 ARFGAP2Q8N6H7 521 aa12.47□□□□□ -0.41
PHACTR4-202ENST00000373839 SYT1P21579 422 aa12.47□□□□□ -0.41
PHACTR4-202ENST00000373839 ARL1P40616 181 aaPredicted RBP12.47□□□□□ -0.41
PHACTR4-202ENST00000373839 UBXN1Q04323 297 aa12.47□□□□□ -0.41
PHACTR4-202ENST00000373839 BIRC3Q13489 604 aa12.47□□□□□ -0.41
PHACTR4-202ENST00000373839 FBF1Q8TES7 1133 aa12.47□□□□□ -0.41
PHACTR4-202ENST00000373839 AZI2Q9H6S1 392 aa12.47□□□□□ -0.41
PHACTR4-202ENST00000373839 CALUO43852 315 aaPredicted RBP12.46□□□□□ -0.41
PHACTR4-202ENST00000373839 ALDH3A1P30838 453 aa12.46□□□□□ -0.41
PHACTR4-202ENST00000373839 AS3MTQ9HBK9 375 aa12.46□□□□□ -0.41
PHACTR4-202ENST00000373839 FAM169AQ9Y6X4 670 aa12.46□□□□□ -0.41
PHACTR4-202ENST00000373839 DNM2P50570 870 aa12.46□□□□□ -0.41
PHACTR4-202ENST00000373839 LETM2Q2VYF4 491 aa12.46□□□□□ -0.41
PHACTR4-202ENST00000373839 SPATA24Q86W54 205 aa12.46□□□□□ -0.41
PHACTR4-202ENST00000373839 ARFGAP3Q9NP61 516 aa12.46□□□□□ -0.41
PHACTR4-202ENST00000373839 ANGEL1Q9UNK9 670 aaKnown RBP12.46□□□□□ -0.41
PHACTR4-202ENST00000373839 ERBB4Q15303 1308 aa12.46□□□□□ -0.42
PHACTR4-202ENST00000373839 DNM1Q05193 864 aaKnown RBP12.46□□□□□ -0.42
PHACTR4-202ENST00000373839 CALCOCO2Q13137 446 aa12.46□□□□□ -0.42
PHACTR4-202ENST00000373839 ARHGEF35A5YM69 484 aa12.45□□□□□ -0.42
PHACTR4-202ENST00000373839 SEL1L2Q5TEA6 688 aa12.45□□□□□ -0.42
PHACTR4-202ENST00000373839 XAGE2Q96GT9 111 aa12.45□□□□□ -0.42
PHACTR4-202ENST00000373839 ZBTB21Q9ULJ3 1066 aa12.45□□□□□ -0.42
PHACTR4-202ENST00000373839 M0QZ92 97 aa12.45□□□□□ -0.42
PHACTR4-202ENST00000373839 SLC1A4P43007 532 aa12.45□□□□□ -0.42
PHACTR4-202ENST00000373839 MAK16Q9BXY0 300 aaKnown RBP12.45□□□□□ -0.42
PHACTR4-202ENST00000373839 LIN9Q5TKA1 542 aa12.45□□□□□ -0.42
PHACTR4-202ENST00000373839 H7C1D1 291 aa12.45□□□□□ -0.42
PHACTR4-202ENST00000373839 ADCY7P51828 1080 aa12.45□□□□□ -0.42
PHACTR4-202ENST00000373839 TRPC3Q13507 836 aa12.45□□□□□ -0.42
PHACTR4-202ENST00000373839 NONOQ15233 471 aaKnown RBP eCLIP12.45□□□□□ -0.42
PHACTR4-202ENST00000373839 DLGAP5Q15398 846 aa12.45□□□□□ -0.42
PHACTR4-202ENST00000373839 SMC6Q96SB8 1091 aa12.45□□□□□ -0.42
PHACTR4-202ENST00000373839 ERICH4A6NGS2 130 aa12.45□□□□□ -0.42
PHACTR4-202ENST00000373839 LPXNO60711 386 aa12.45□□□□□ -0.42
PHACTR4-202ENST00000373839 PABPC4Q13310 644 aaKnown RBP eCLIP12.45□□□□□ -0.423e-6■■■■■ 29.2
PHACTR4-202ENST00000373839 TESK2Q96S53 571 aa12.45□□□□□ -0.42
PHACTR4-202ENST00000373839 SPC25Q9HBM1 224 aa12.45□□□□□ -0.42
PHACTR4-202ENST00000373839 USP21Q9UK80 565 aa12.45□□□□□ -0.42
PHACTR4-202ENST00000373839 CETN3O15182 167 aa12.44□□□□□ -0.42
PHACTR4-202ENST00000373839 MYL5Q02045 173 aa12.44□□□□□ -0.42
PHACTR4-202ENST00000373839 TRAF5O00463 557 aa12.44□□□□□ -0.42
PHACTR4-202ENST00000373839 TYRO3Q06418 890 aa12.44□□□□□ -0.42
PHACTR4-202ENST00000373839 PLEKHM2Q8IWE5 1019 aa12.44□□□□□ -0.42
PHACTR4-202ENST00000373839 DNAJC25Q9H1X3 360 aa12.44□□□□□ -0.42
PHACTR4-202ENST00000373839 GPCPD1Q9NPB8 672 aa12.44□□□□□ -0.42
PHACTR4-202ENST00000373839 COL17A1Q9UMD9 1497 aaPredicted RBP12.44□□□□□ -0.42
PHACTR4-202ENST00000373839 CCDC129Q6ZRS4 1044 aa12.44□□□□□ -0.42
PHACTR4-202ENST00000373839 DPH6Q7L8W6 267 aa12.44□□□□□ -0.42
PHACTR4-202ENST00000373839 TMX1Q9H3N1 280 aa12.44□□□□□ -0.42
PHACTR4-202ENST00000373839 SLAIN2Q9P270 581 aa12.44□□□□□ -0.42
PHACTR4-202ENST00000373839 RPS6KB1P23443 525 aa12.44□□□□□ -0.42
PHACTR4-202ENST00000373839 FAM160A1Q05DH4 1040 aa12.44□□□□□ -0.42
PHACTR4-202ENST00000373839 ADAMTS12P58397 1594 aa12.44□□□□□ -0.42
PHACTR4-202ENST00000373839 GJC1P36383 396 aa12.44□□□□□ -0.42
PHACTR4-202ENST00000373839 IRX3P78415 501 aaPredicted RBP12.44□□□□□ -0.42
PHACTR4-202ENST00000373839 INF2Q27J81 1249 aa12.44□□□□□ -0.42
PHACTR4-202ENST00000373839 DCAF15Q66K64 600 aa12.44□□□□□ -0.42
PHACTR4-202ENST00000373839 TSPYL6Q8N831 410 aa12.44□□□□□ -0.42
PHACTR4-202ENST00000373839 KBTBD3Q8NAB2 608 aa12.44□□□□□ -0.42
PHACTR4-202ENST00000373839 CHURC1Q8WUH1 139 aa12.44□□□□□ -0.42
PHACTR4-202ENST00000373839 DNAI1Q9UI46 699 aa12.44□□□□□ -0.42
PHACTR4-202ENST00000373839 PHACTR3Q96KR7 559 aa12.43□□□□□ -0.42
PHACTR4-202ENST00000373839 IWS1Q96ST2 819 aa12.43□□□□□ -0.42
PHACTR4-202ENST00000373839 VAV2P52735 878 aa12.43□□□□□ -0.42
PHACTR4-202ENST00000373839 ARPP21Q9UBL0 812 aaPredicted RBP12.43□□□□□ -0.42
PHACTR4-202ENST00000373839 SAP30BPQ9UHR5 308 aaKnown RBP12.43□□□□□ -0.42
PHACTR4-202ENST00000373839 CHL1O00533 1208 aa12.43□□□□□ -0.42
PHACTR4-202ENST00000373839 IL13P35225 146 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms