RNA–Protein interactions for RNA: ENST00000373386.6

GARNL3-201, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 3,143 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-201ENST00000373386 MMS22LQ6ZRQ5 1243 aa9.44□□□□□ -0.9
GARNL3-201ENST00000373386 PROSER2Q86WR7 435 aaPredicted RBP9.44□□□□□ -0.9
GARNL3-201ENST00000373386 CCDC83Q8IWF9 413 aa9.44□□□□□ -0.9
GARNL3-201ENST00000373386 RBM12BQ8IXT5 1001 aaKnown RBP9.44□□□□□ -0.9
GARNL3-201ENST00000373386 IQSEC3Q9UPP2 1182 aaPredicted RBP9.44□□□□□ -0.9
GARNL3-201ENST00000373386 MYH15Q9Y2K3 1946 aa9.44□□□□□ -0.9
GARNL3-201ENST00000373386 SHANK3Q9BYB0 1731 aa9.44□□□□□ -0.9
GARNL3-201ENST00000373386 KCPQ6ZWJ8 1503 aa9.44□□□□□ -0.9
GARNL3-201ENST00000373386 MAGEA9P43362 315 aa9.43□□□□□ -0.9
GARNL3-201ENST00000373386 TNS2Q63HR2 1409 aa9.43□□□□□ -0.9
GARNL3-201ENST00000373386 KLHL10Q6JEL2 608 aa9.43□□□□□ -0.9
GARNL3-201ENST00000373386 GIMAP6Q6P9H5 292 aa9.43□□□□□ -0.9
GARNL3-201ENST00000373386 DRAXINQ8NBI3 349 aaPredicted RBP9.43□□□□□ -0.9
GARNL3-201ENST00000373386 SPATS2LQ9NUQ6 558 aaKnown RBP9.43□□□□□ -0.9
GARNL3-201ENST00000373386 PA2G4Q9UQ80 394 aaKnown RBP9.43□□□□□ -0.9
GARNL3-201ENST00000373386 ZNF335Q9H4Z2 1342 aaPredicted RBP9.43□□□□□ -0.9
GARNL3-201ENST00000373386 SHTN1A0MZ66 631 aa9.43□□□□□ -0.9
GARNL3-201ENST00000373386 DNM1Q05193 864 aaKnown RBP9.43□□□□□ -0.9
GARNL3-201ENST00000373386 ST3GAL1Q11201 340 aa9.43□□□□□ -0.9
GARNL3-201ENST00000373386 E2F5Q15329 346 aa9.43□□□□□ -0.9
GARNL3-201ENST00000373386 SLC5A9Q2M3M2 681 aa9.43□□□□□ -0.9
GARNL3-201ENST00000373386 TSNAXIP1Q2TAA8 658 aa9.43□□□□□ -0.9
GARNL3-201ENST00000373386 TBC1D25Q3MII6 688 aa9.43□□□□□ -0.9
GARNL3-201ENST00000373386 ADCK5Q3MIX3 580 aa9.43□□□□□ -0.9
GARNL3-201ENST00000373386 FBXL16Q8N461 479 aa9.43□□□□□ -0.9
GARNL3-201ENST00000373386 KIAA1524Q8TCG1 905 aa9.43□□□□□ -0.9
GARNL3-201ENST00000373386 MIEF2Q96C03 454 aa9.43□□□□□ -0.9
GARNL3-201ENST00000373386 HAUS7Q99871 368 aa9.43□□□□□ -0.9
GARNL3-201ENST00000373386 POLR3CQ9BUI4 534 aaPredicted RBP9.43□□□□□ -0.9
GARNL3-201ENST00000373386 TMOD4Q9NZQ9 345 aa9.43□□□□□ -0.9
GARNL3-201ENST00000373386 U3KPZ7 1027 aaPredicted RBP9.43□□□□□ -0.9
GARNL3-201ENST00000373386 ABCA3Q99758 1704 aa9.43□□□□□ -0.9
GARNL3-201ENST00000373386 ANKRD62A6NC57 917 aa9.42□□□□□ -0.9
GARNL3-201ENST00000373386 LARGE1O95461 756 aa9.42□□□□□ -0.9
GARNL3-201ENST00000373386 CCDC175P0C221 793 aa9.42□□□□□ -0.9
GARNL3-201ENST00000373386 CSB-PGBD3P0DP91 1061 aa9.42□□□□□ -0.9
GARNL3-201ENST00000373386 NAT2P11245 290 aa9.42□□□□□ -0.9
GARNL3-201ENST00000373386 ICA1Q05084 483 aa9.42□□□□□ -0.9
GARNL3-201ENST00000373386 PTPN12Q05209 780 aaKnown RBP9.42□□□□□ -0.9
GARNL3-201ENST00000373386 NKX1-1Q15270 411 aaPredicted RBP9.42□□□□□ -0.9
GARNL3-201ENST00000373386 ME3Q16798 604 aa9.42□□□□□ -0.9
GARNL3-201ENST00000373386 TNNI3KQ59H18 835 aa9.42□□□□□ -0.9
GARNL3-201ENST00000373386 CCDC178Q5BJE1 867 aa9.42□□□□□ -0.9
GARNL3-201ENST00000373386 BLOC1S2Q6QNY1 142 aa9.42□□□□□ -0.9
GARNL3-201ENST00000373386 SRLQ86TD4 932 aa9.42□□□□□ -0.9
GARNL3-201ENST00000373386 XAGE3Q8WTP9 111 aa9.42□□□□□ -0.9
GARNL3-201ENST00000373386 TEKT1Q969V4 418 aa9.42□□□□□ -0.9
GARNL3-201ENST00000373386 LLPHQ9BRT6 129 aaKnown RBP9.42□□□□□ -0.9
GARNL3-201ENST00000373386 METTL14Q9HCE5 456 aaKnown RBP9.42□□□□□ -0.9
GARNL3-201ENST00000373386 FPGT-TNNI3KV9GXZ4 949 aa9.42□□□□□ -0.9
GARNL3-201ENST00000373386 ABCC12Q96J65 1359 aa9.42□□□□□ -0.9
GARNL3-201ENST00000373386 DDX60Q8IY21 1712 aaKnown RBP9.42□□□□□ -0.9
GARNL3-201ENST00000373386 PRAMEF22A3QJZ6 481 aa9.42□□□□□ -0.9
GARNL3-201ENST00000373386 CREB3O43889 395 aa9.42□□□□□ -0.9
GARNL3-201ENST00000373386 TAF5LO75529 589 aa9.42□□□□□ -0.9
GARNL3-201ENST00000373386 RDXP35241 583 aaKnown RBP9.42□□□□□ -0.9
GARNL3-201ENST00000373386 TRPC1P48995 793 aa9.42□□□□□ -0.9
GARNL3-201ENST00000373386 KRT85P78386 507 aa9.42□□□□□ -0.9
GARNL3-201ENST00000373386 HHATQ5VTY9 493 aa9.42□□□□□ -0.9
GARNL3-201ENST00000373386 COPS6Q7L5N1 327 aa9.42□□□□□ -0.9
GARNL3-201ENST00000373386 PACS2Q86VP3 889 aa9.42□□□□□ -0.9
GARNL3-201ENST00000373386 TTC5Q8N0Z6 440 aa9.42□□□□□ -0.9
GARNL3-201ENST00000373386 BIN2Q9UBW5 565 aaPredicted RBP9.42□□□□□ -0.9
GARNL3-201ENST00000373386 ERVV-2B6SEH9 535 aa9.42□□□□□ -0.9
GARNL3-201ENST00000373386 ALDH1B1P30837 517 aa9.42□□□□□ -0.9
GARNL3-201ENST00000373386 INF2Q27J81 1249 aa9.42□□□□□ -0.9
GARNL3-201ENST00000373386 SAMD3Q8N6K7 520 aa9.42□□□□□ -0.9
GARNL3-201ENST00000373386 FAM200AQ8TCP9 573 aa9.42□□□□□ -0.9
GARNL3-201ENST00000373386 FSD1Q9BTV5 496 aa9.42□□□□□ -0.9
GARNL3-201ENST00000373386 SCAND2PQ9GZW5 306 aaPredicted RBP9.42□□□□□ -0.9
GARNL3-201ENST00000373386 SLC24A3Q9HC58 644 aa9.42□□□□□ -0.9
GARNL3-201ENST00000373386 SPATA31A3Q5VYP0 1347 aa9.41□□□□□ -0.9
GARNL3-201ENST00000373386 VPS37CA5D8V6 355 aaPredicted RBP9.41□□□□□ -0.9
GARNL3-201ENST00000373386 H7C1W4 665 aa9.41□□□□□ -0.9
GARNL3-201ENST00000373386 CIAO1O76071 339 aa9.41□□□□□ -0.9
GARNL3-201ENST00000373386 LEKR1Q6ZMV7 388 aa9.41□□□□□ -0.9
GARNL3-201ENST00000373386 RBM43Q6ZSC3 357 aaKnown RBP9.41□□□□□ -0.9
GARNL3-201ENST00000373386 CCDC186Q7Z3E2 898 aa9.41□□□□□ -0.9
GARNL3-201ENST00000373386 C17orf53Q8N3J3 647 aaPredicted RBP9.41□□□□□ -0.9
GARNL3-201ENST00000373386 GIMAP7Q8NHV1 300 aa9.41□□□□□ -0.9
GARNL3-201ENST00000373386 ZNF496Q96IT1 587 aaPredicted RBP9.41□□□□□ -0.9
GARNL3-201ENST00000373386 HELLSQ9NRZ9 838 aa9.41□□□□□ -0.9
GARNL3-201ENST00000373386 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.41□□□□□ -0.9
GARNL3-201ENST00000373386 TPCN1Q9ULQ1 816 aa9.41□□□□□ -0.9
GARNL3-201ENST00000373386 ZC3H4Q9UPT8 1303 aaKnown RBP9.41□□□□□ -0.9
GARNL3-201ENST00000373386 LAMA4Q16363 1823 aa9.41□□□□□ -0.9
GARNL3-201ENST00000373386 A0A0D9SFI3 127 aa9.41□□□□□ -0.9
GARNL3-201ENST00000373386 CTIFO43310 598 aaKnown RBP9.41□□□□□ -0.9
GARNL3-201ENST00000373386 ECM2O94769 699 aaPredicted RBP9.41□□□□□ -0.9
GARNL3-201ENST00000373386 CAVIN2O95810 425 aa9.41□□□□□ -0.9
GARNL3-201ENST00000373386 ATF3P18847 181 aa9.41□□□□□ -0.9
GARNL3-201ENST00000373386 MAP3K11Q16584 847 aa9.41□□□□□ -0.9
GARNL3-201ENST00000373386 ATL3Q6DD88 541 aa9.41□□□□□ -0.9
GARNL3-201ENST00000373386 ELOA2Q8IYF1 753 aaPredicted RBP9.41□□□□□ -0.9
GARNL3-201ENST00000373386 NFATC2IPQ8NCF5 419 aa9.41□□□□□ -0.9
GARNL3-201ENST00000373386 KIF18AQ8NI77 898 aa9.41□□□□□ -0.9
GARNL3-201ENST00000373386 PPM1EQ8WY54 764 aa9.41□□□□□ -0.9
GARNL3-201ENST00000373386 FAM227BQ96M60 508 aa9.41□□□□□ -0.9
GARNL3-201ENST00000373386 NUP62CLQ9H1M0 184 aa9.41□□□□□ -0.9
GARNL3-201ENST00000373386 AKAP2Q9Y2D5 859 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms