RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 DDX19AQ9NUU7 478 aaKnown RBP13.69□□□□□ -0.22
PDE6C-201ENST00000371447 FAM13BQ9NYF5 915 aa13.69□□□□□ -0.22
PDE6C-201ENST00000371447 FBXO3Q9UK99 471 aa13.69□□□□□ -0.22
PDE6C-201ENST00000371447 CRYBG1Q9Y4K1 1723 aa13.69□□□□□ -0.22
PDE6C-201ENST00000371447 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.69□□□□□ -0.22
PDE6C-201ENST00000371447 TACC3Q9Y6A5 838 aa13.69□□□□□ -0.22
PDE6C-201ENST00000371447 NTSR2O95665 410 aa13.68□□□□□ -0.22
PDE6C-201ENST00000371447 IARSP41252 1262 aaKnown RBP13.68□□□□□ -0.22
PDE6C-201ENST00000371447 NDUFA8P51970 172 aa13.68□□□□□ -0.22
PDE6C-201ENST00000371447 NAA16Q6N069 864 aaPredicted RBP13.68□□□□□ -0.22
PDE6C-201ENST00000371447 APOA5Q6Q788 366 aa13.68□□□□□ -0.22
PDE6C-201ENST00000371447 FILIP1Q7Z7B0 1213 aa13.68□□□□□ -0.22
PDE6C-201ENST00000371447 PARP4Q9UKK3 1724 aaKnown RBP13.68□□□□□ -0.22
PDE6C-201ENST00000371447 GUCY1A2P33402 732 aa13.68□□□□□ -0.22
PDE6C-201ENST00000371447 UBE3CQ15386 1083 aa13.68□□□□□ -0.22
PDE6C-201ENST00000371447 PTPN21Q16825 1174 aa13.68□□□□□ -0.22
PDE6C-201ENST00000371447 CCDC186Q7Z3E2 898 aa13.68□□□□□ -0.22
PDE6C-201ENST00000371447 FBXO18Q8NFZ0 1043 aa13.68□□□□□ -0.22
PDE6C-201ENST00000371447 CLIC6Q96NY7 704 aa13.68□□□□□ -0.22
PDE6C-201ENST00000371447 ZNF652Q9Y2D9 606 aa13.68□□□□□ -0.22
PDE6C-201ENST00000371447 RFX7Q2KHR2 1363 aa13.68□□□□□ -0.22
PDE6C-201ENST00000371447 GSG1L2A8MUP6 293 aa13.67□□□□□ -0.22
PDE6C-201ENST00000371447 ZPR1O75312 459 aa13.67□□□□□ -0.22
PDE6C-201ENST00000371447 TRIM29Q14134 588 aa13.67□□□□□ -0.22
PDE6C-201ENST00000371447 CPLX2Q6PUV4 134 aaKnown RBP13.67□□□□□ -0.22
PDE6C-201ENST00000371447 AMIGO3Q86WK7 504 aa13.67□□□□□ -0.22
PDE6C-201ENST00000371447 CDC5LQ99459 802 aaKnown RBP13.67□□□□□ -0.22
PDE6C-201ENST00000371447 NACAP1Q9BZK3 213 aa13.67□□□□□ -0.22
PDE6C-201ENST00000371447 ELP1O95163 1332 aa13.67□□□□□ -0.22
PDE6C-201ENST00000371447 PATL2C9JE40 543 aaKnown RBP13.67□□□□□ -0.22
PDE6C-201ENST00000371447 FGFR2P21802 821 aa13.67□□□□□ -0.22
PDE6C-201ENST00000371447 KRT40Q6A162 431 aa13.67□□□□□ -0.22
PDE6C-201ENST00000371447 PYCARDQ9ULZ3 195 aa13.67□□□□□ -0.22
PDE6C-201ENST00000371447 ERICH2A1L162 156 aa13.66□□□□□ -0.22
PDE6C-201ENST00000371447 SPTLC2O15270 562 aa13.66□□□□□ -0.22
PDE6C-201ENST00000371447 SETDB2Q96T68 719 aa13.66□□□□□ -0.22
PDE6C-201ENST00000371447 UBAC1Q9BSL1 405 aa13.66□□□□□ -0.22
PDE6C-201ENST00000371447 AATFQ9NY61 560 aaKnown RBP eCLIP13.66□□□□□ -0.22
PDE6C-201ENST00000371447 TOGARAM1Q9Y4F4 1720 aa13.66□□□□□ -0.22
PDE6C-201ENST00000371447 TCRBV5S4A2TA0A5A2 114 aa13.66□□□□□ -0.22
PDE6C-201ENST00000371447 OFD1O75665 1012 aa13.66□□□□□ -0.22
PDE6C-201ENST00000371447 ARID4AP29374 1257 aaPredicted RBP13.66□□□□□ -0.22
PDE6C-201ENST00000371447 PARP10Q53GL7 1025 aa13.66□□□□□ -0.22
PDE6C-201ENST00000371447 CAVIN4Q5BKX8 364 aa13.66□□□□□ -0.22
PDE6C-201ENST00000371447 MYSM1Q5VVJ2 828 aa13.66□□□□□ -0.22
PDE6C-201ENST00000371447 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.66□□□□□ -0.22
PDE6C-201ENST00000371447 DHX37Q8IY37 1157 aaKnown RBP13.66□□□□□ -0.22
PDE6C-201ENST00000371447 PDILTQ8N807 584 aa13.66□□□□□ -0.22
PDE6C-201ENST00000371447 RCOR1Q9UKL0 485 aa13.66□□□□□ -0.22
PDE6C-201ENST00000371447 SH2B2O14492 632 aaPredicted RBP13.66□□□□□ -0.22
PDE6C-201ENST00000371447 UVSSAQ2YD98 709 aa13.66□□□□□ -0.22
PDE6C-201ENST00000371447 AGXT2Q9BYV1 514 aa13.66□□□□□ -0.22
PDE6C-201ENST00000371447 SPATA31A5Q5VU36 1347 aa13.65□□□□□ -0.22
PDE6C-201ENST00000371447 SPATA31A7Q8IWB4 1347 aa13.65□□□□□ -0.22
PDE6C-201ENST00000371447 ARID5BQ14865 1188 aa13.65□□□□□ -0.22
PDE6C-201ENST00000371447 AKNAD1Q5T1N1 836 aa13.65□□□□□ -0.22
PDE6C-201ENST00000371447 MEX3CQ5U5Q3 659 aaKnown RBP13.65□□□□□ -0.22
PDE6C-201ENST00000371447 ANKIB1Q9P2G1 1089 aa13.65□□□□□ -0.22
PDE6C-201ENST00000371447 CCNL1Q9UK58 526 aaPredicted RBP13.65□□□□□ -0.22
PDE6C-201ENST00000371447 MAGEB6P1A0A0J9YX57 407 aa13.65□□□□□ -0.22
PDE6C-201ENST00000371447 BTBD18B2RXH4 712 aa13.65□□□□□ -0.22
PDE6C-201ENST00000371447 WTAPQ15007 396 aa13.65□□□□□ -0.22
PDE6C-201ENST00000371447 AOPEPQ8N6M6 819 aa13.65□□□□□ -0.22
PDE6C-201ENST00000371447 MRPS27Q92552 414 aaKnown RBP13.65□□□□□ -0.22
PDE6C-201ENST00000371447 BAZ2BQ9UIF8 2168 aaKnown RBP13.65□□□□□ -0.22
PDE6C-201ENST00000371447 SRCAPQ6ZRS2 3230 aa13.65□□□□□ -0.23
PDE6C-201ENST00000371447 NMT2O60551 498 aa13.64□□□□□ -0.23
PDE6C-201ENST00000371447 FAM47AQ5JRC9 791 aa13.64□□□□□ -0.23
PDE6C-201ENST00000371447 TXNRD3Q86VQ6 643 aa13.64□□□□□ -0.23
PDE6C-201ENST00000371447 MINPP1Q9UNW1 487 aa13.64□□□□□ -0.23
PDE6C-201ENST00000371447 UQCRHLA0A096LP55 91 aa13.64□□□□□ -0.23
PDE6C-201ENST00000371447 TOM1O60784 492 aa13.64□□□□□ -0.23
PDE6C-201ENST00000371447 UQCRHP07919 91 aa13.64□□□□□ -0.23
PDE6C-201ENST00000371447 NOLC1Q14978 699 aaKnown RBP eCLIP13.64□□□□□ -0.23
PDE6C-201ENST00000371447 LINC00301Q8NCQ3 95 aa13.64□□□□□ -0.23
PDE6C-201ENST00000371447 IGDCC4Q8TDY8 1250 aa13.64□□□□□ -0.23
PDE6C-201ENST00000371447 LY9Q9HBG7 655 aa13.64□□□□□ -0.23
PDE6C-201ENST00000371447 PRDX5P30044 214 aa13.64□□□□□ -0.23
PDE6C-201ENST00000371447 KIF23Q02241 960 aaPredicted RBP13.64□□□□□ -0.23
PDE6C-201ENST00000371447 FAM160A1Q05DH4 1040 aa13.64□□□□□ -0.23
PDE6C-201ENST00000371447 NR5A1Q13285 461 aa13.64□□□□□ -0.23
PDE6C-201ENST00000371447 NLRP3Q96P20 1036 aa13.64□□□□□ -0.23
PDE6C-201ENST00000371447 GNL3LQ9NVN8 582 aaKnown RBP13.64□□□□□ -0.23
PDE6C-201ENST00000371447 SSRP1Q08945 709 aaKnown RBP13.63□□□□□ -0.23
PDE6C-201ENST00000371447 SNW1Q13573 536 aaKnown RBP13.63□□□□□ -0.23
PDE6C-201ENST00000371447 ANO1Q5XXA6 986 aa13.63□□□□□ -0.23
PDE6C-201ENST00000371447 ZNF592Q92610 1267 aa13.63□□□□□ -0.23
PDE6C-201ENST00000371447 CLIP2Q9UDT6 1046 aa13.63□□□□□ -0.23
PDE6C-201ENST00000371447 DISP2A7MBM2 1401 aa13.63□□□□□ -0.23
PDE6C-201ENST00000371447 SALL1Q9NSC2 1324 aa13.63□□□□□ -0.23
PDE6C-201ENST00000371447 TJP1Q07157 1748 aa13.63□□□□□ -0.23
PDE6C-201ENST00000371447 SART3Q15020 963 aaKnown RBP13.63□□□□□ -0.23
PDE6C-201ENST00000371447 CDCA7Q9BWT1 371 aaPredicted RBP13.63□□□□□ -0.23
PDE6C-201ENST00000371447 USP17L12C9JPN9 530 aa13.62□□□□□ -0.23
PDE6C-201ENST00000371447 USP17L21D6R901 530 aa13.62□□□□□ -0.23
PDE6C-201ENST00000371447 WDHD1O75717 1129 aaPredicted RBP13.62□□□□□ -0.23
PDE6C-201ENST00000371447 CYP2D6P10635 497 aa13.62□□□□□ -0.23
PDE6C-201ENST00000371447 PPARAQ07869 468 aa13.62□□□□□ -0.23
PDE6C-201ENST00000371447 HS1BP3Q53T59 392 aa13.62□□□□□ -0.23
PDE6C-201ENST00000371447 SMARCC1Q92922 1105 aaPredicted RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms