RNA–Protein interactions for RNA: ENST00000370086.7

SSR4-203, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR4, Length 643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-203ENST00000370086 FAM83AQ86UY5 434 aa17.8■□□□□ 0.44
SSR4-203ENST00000370086 EAF2Q96CJ1 260 aaPredicted RBP17.8■□□□□ 0.44
SSR4-203ENST00000370086 CLMNQ96JQ2 1002 aa17.8■□□□□ 0.44
SSR4-203ENST00000370086 CCDC8Q9H0W5 538 aaPredicted RBP17.8■□□□□ 0.44
SSR4-203ENST00000370086 TLR7Q9NYK1 1049 aaKnown RBP17.8■□□□□ 0.44
SSR4-203ENST00000370086 TMOD2Q9NZR1 351 aa17.8■□□□□ 0.44
SSR4-203ENST00000370086 MKRN3Q13064 507 aaKnown RBP17.79■□□□□ 0.44
SSR4-203ENST00000370086 TTC39AQ5SRH9 613 aa17.79■□□□□ 0.44
SSR4-203ENST00000370086 SPTY2D1Q68D10 685 aaPredicted RBP17.79■□□□□ 0.44
SSR4-203ENST00000370086 DZIP1Q86YF9 867 aaKnown RBP17.79■□□□□ 0.44
SSR4-203ENST00000370086 ZNF384Q8TF68 577 aa17.79■□□□□ 0.44
SSR4-203ENST00000370086 DBNLQ9UJU6 430 aaKnown RBP17.79■□□□□ 0.44
SSR4-203ENST00000370086 CASP8AP2Q9UKL3 1982 aa17.79■□□□□ 0.44
SSR4-203ENST00000370086 GAKO14976 1311 aa17.78■□□□□ 0.44
SSR4-203ENST00000370086 CA12O43570 354 aa17.78■□□□□ 0.44
SSR4-203ENST00000370086 MECOMQ03112 1051 aa17.78■□□□□ 0.44
SSR4-203ENST00000370086 CCDC158Q5M9N0 1113 aa17.78■□□□□ 0.44
SSR4-203ENST00000370086 ERICH6Q7L0X2 663 aa17.78■□□□□ 0.44
SSR4-203ENST00000370086 CHMP4BQ9H444 224 aaKnown RBP17.78■□□□□ 0.44
SSR4-203ENST00000370086 SNRKQ9NRH2 765 aa17.78■□□□□ 0.44
SSR4-203ENST00000370086 USP40Q9NVE5 1235 aa17.78■□□□□ 0.44
SSR4-203ENST00000370086 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.78■□□□□ 0.44
SSR4-203ENST00000370086 MAST2Q6P0Q8 1798 aa17.77■□□□□ 0.44
SSR4-203ENST00000370086 IREB2P48200 963 aaKnown RBP17.77■□□□□ 0.44
SSR4-203ENST00000370086 NFIAQ12857 509 aa17.77■□□□□ 0.44
SSR4-203ENST00000370086 SPRYD7Q5W111 196 aa17.77■□□□□ 0.44
SSR4-203ENST00000370086 ERC1Q8IUD2 1116 aa17.77■□□□□ 0.44
SSR4-203ENST00000370086 SLC10A4Q96EP9 437 aa17.77■□□□□ 0.44
SSR4-203ENST00000370086 FAM163AQ96GL9 167 aaPredicted RBP17.77■□□□□ 0.44
SSR4-203ENST00000370086 ZNF512BQ96KM6 892 aaPredicted RBP17.77■□□□□ 0.44
SSR4-203ENST00000370086 RNF186Q9NXI6 227 aa17.77■□□□□ 0.44
SSR4-203ENST00000370086 MROH7-TTC4A0A0A0MT08 1334 aa17.76■□□□□ 0.43
SSR4-203ENST00000370086 HMMRO75330 724 aa17.76■□□□□ 0.43
SSR4-203ENST00000370086 TCP10Q12799 353 aa17.76■□□□□ 0.43
SSR4-203ENST00000370086 HSP90AB4PQ58FF6 505 aa17.76■□□□□ 0.43
SSR4-203ENST00000370086 TNS4Q8IZW8 715 aa17.76■□□□□ 0.43
SSR4-203ENST00000370086 RHPN1Q8TCX5 695 aa17.76■□□□□ 0.43
SSR4-203ENST00000370086 FAM151AQ8WW52 585 aa17.76■□□□□ 0.43
SSR4-203ENST00000370086 NSUN4Q96CB9 384 aaKnown RBP17.76■□□□□ 0.43
SSR4-203ENST00000370086 IL1RAPL2Q9NP60 686 aa17.76■□□□□ 0.43
SSR4-203ENST00000370086 FAM198AQ9UFP1 575 aa17.76■□□□□ 0.43
SSR4-203ENST00000370086 DOCK2Q92608 1830 aa17.76■□□□□ 0.43
SSR4-203ENST00000370086 RPAP1Q9BWH6 1393 aaPredicted RBP17.76■□□□□ 0.43
SSR4-203ENST00000370086 UNCXA6NJT0 531 aa17.75■□□□□ 0.43
SSR4-203ENST00000370086 CYP2E1P05181 493 aaPredicted RBP17.75■□□□□ 0.43
SSR4-203ENST00000370086 IFFO2Q5TF58 517 aa17.75■□□□□ 0.43
SSR4-203ENST00000370086 ZFPM1Q8IX07 1006 aa17.75■□□□□ 0.43
SSR4-203ENST00000370086 SLF2Q8IX21 1173 aa17.75■□□□□ 0.43
SSR4-203ENST00000370086 REM2Q8IYK8 340 aaPredicted RBP17.75■□□□□ 0.43
SSR4-203ENST00000370086 ANKRD13AQ8IZ07 590 aa17.75■□□□□ 0.43
SSR4-203ENST00000370086 WNK4Q96J92 1243 aa17.75■□□□□ 0.43
SSR4-203ENST00000370086 CDK5RAP2Q96SN8 1893 aa17.74■□□□□ 0.43
SSR4-203ENST00000370086 APBB1O00213 710 aa17.74■□□□□ 0.43
SSR4-203ENST00000370086 TRPA1O75762 1119 aa17.74■□□□□ 0.43
SSR4-203ENST00000370086 GJA5P36382 358 aa17.74■□□□□ 0.43
SSR4-203ENST00000370086 BTDP43251 543 aa17.74■□□□□ 0.43
SSR4-203ENST00000370086 ZAP70P43403 619 aa17.74■□□□□ 0.43
SSR4-203ENST00000370086 TM4SF4P48230 202 aa17.74■□□□□ 0.43
SSR4-203ENST00000370086 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.74■□□□□ 0.43
SSR4-203ENST00000370086 AACSQ86V21 672 aa17.74■□□□□ 0.43
SSR4-203ENST00000370086 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.74■□□□□ 0.432e-7■□□□□ 8.1
SSR4-203ENST00000370086 SAGE1Q9NXZ1 904 aa17.74■□□□□ 0.43
SSR4-203ENST00000370086 RAI14Q9P0K7 980 aa17.74■□□□□ 0.43
SSR4-203ENST00000370086 LRP2BPQ9P2M1 347 aa17.74■□□□□ 0.43
SSR4-203ENST00000370086 RFX7Q2KHR2 1363 aa17.74■□□□□ 0.43
SSR4-203ENST00000370086 GPR75-ASB3A0A0A6YYF3 556 aa17.73■□□□□ 0.43
SSR4-203ENST00000370086 RHBDL3P58872 404 aa17.73■□□□□ 0.43
SSR4-203ENST00000370086 KIF1BPQ96EK5 621 aa17.73■□□□□ 0.43
SSR4-203ENST00000370086 IDI2Q9BXS1 227 aa17.73■□□□□ 0.43
SSR4-203ENST00000370086 WDHD1O75717 1129 aaPredicted RBP17.72■□□□□ 0.43
SSR4-203ENST00000370086 RGS3P49796 1198 aa17.72■□□□□ 0.43
SSR4-203ENST00000370086 RRP1P56182 461 aaKnown RBP17.72■□□□□ 0.43
SSR4-203ENST00000370086 GSTO1P78417 241 aa17.72■□□□□ 0.43
SSR4-203ENST00000370086 MAP3K9P80192 1104 aa17.72■□□□□ 0.43
SSR4-203ENST00000370086 VGLL4Q14135 290 aa17.72■□□□□ 0.43
SSR4-203ENST00000370086 MIGA2Q7L4E1 593 aa17.72■□□□□ 0.43
SSR4-203ENST00000370086 ELP3Q9H9T3 547 aa17.72■□□□□ 0.43
SSR4-203ENST00000370086 DDX4Q9NQI0 724 aaKnown RBP17.72■□□□□ 0.43
SSR4-203ENST00000370086 PIH1D3Q9NQM4 214 aaKnown RBP17.72■□□□□ 0.43
SSR4-203ENST00000370086 FOCADQ5VW36 1801 aa17.71■□□□□ 0.43
SSR4-203ENST00000370086 RAB11FIP3O75154 756 aa17.71■□□□□ 0.43
SSR4-203ENST00000370086 LDHCP07864 332 aa17.71■□□□□ 0.43
SSR4-203ENST00000370086 ZBTB48P10074 688 aaPredicted RBP17.71■□□□□ 0.43
SSR4-203ENST00000370086 SH3BP5LQ7L8J4 393 aa17.71■□□□□ 0.43
SSR4-203ENST00000370086 CNKSR2Q8WXI2 1034 aa17.71■□□□□ 0.43
SSR4-203ENST00000370086 OPTNQ96CV9 577 aa17.71■□□□□ 0.43
SSR4-203ENST00000370086 HOOK2Q96ED9 719 aa17.71■□□□□ 0.43
SSR4-203ENST00000370086 NDUFB9Q9Y6M9 179 aa17.71■□□□□ 0.43
SSR4-203ENST00000370086 ENTPD3O75355 529 aa17.7■□□□□ 0.42
SSR4-203ENST00000370086 SREBF2Q12772 1141 aa17.7■□□□□ 0.42
SSR4-203ENST00000370086 DCAF15Q66K64 600 aa17.7■□□□□ 0.42
SSR4-203ENST00000370086 CLASRPQ8N2M8 674 aaKnown RBP17.7■□□□□ 0.42
SSR4-203ENST00000370086 ZKSCAN4Q969J2 545 aaPredicted RBP17.7■□□□□ 0.42
SSR4-203ENST00000370086 WRNIP1Q96S55 665 aa17.7■□□□□ 0.42
SSR4-203ENST00000370086 MANSC4A6NHS7 340 aaPredicted RBP17.69■□□□□ 0.42
SSR4-203ENST00000370086 PICALMQ13492 652 aa17.69■□□□□ 0.42
SSR4-203ENST00000370086 NAA16Q6N069 864 aaPredicted RBP17.69■□□□□ 0.42
SSR4-203ENST00000370086 ADGRA1Q86SQ6 560 aa17.69■□□□□ 0.42
SSR4-203ENST00000370086 ZNF341Q9BYN7 854 aa17.69■□□□□ 0.42
SSR4-203ENST00000370086 BCL11AQ9H165 835 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms