RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 FKBP1CQ5VVH2 108 aa27.42■■□□□ 1.98
ECHDC1-203ENST00000368291 CAPNS2Q96L46 248 aa27.42■■□□□ 1.98
ECHDC1-203ENST00000368291 TMEM39BQ9GZU3 492 aa27.42■■□□□ 1.98
ECHDC1-203ENST00000368291 RAI14Q9P0K7 980 aa27.42■■□□□ 1.98
ECHDC1-203ENST00000368291 NF2P35240 595 aa27.41■■□□□ 1.98
ECHDC1-203ENST00000368291 SLF2Q8IX21 1173 aa27.41■■□□□ 1.98
ECHDC1-203ENST00000368291 ANTXR1Q9H6X2 564 aa27.41■■□□□ 1.98
ECHDC1-203ENST00000368291 FZD1Q9UP38 647 aa27.41■■□□□ 1.98
ECHDC1-203ENST00000368291 CDK5RAP2Q96SN8 1893 aa27.41■■□□□ 1.98
ECHDC1-203ENST00000368291 HDAC1Q13547 482 aaPredicted RBP27.4■■□□□ 1.98
ECHDC1-203ENST00000368291 FAM83AQ86UY5 434 aa27.4■■□□□ 1.98
ECHDC1-203ENST00000368291 PPIL4Q8WUA2 492 aaKnown RBP eCLIP27.4■■□□□ 1.98
ECHDC1-203ENST00000368291 TMOD2Q9NZR1 351 aa27.4■■□□□ 1.98
ECHDC1-203ENST00000368291 GPR75-ASB3A0A0A6YYF3 556 aa27.39■■□□□ 1.98
ECHDC1-203ENST00000368291 TNNI2P48788 182 aa27.39■■□□□ 1.98
ECHDC1-203ENST00000368291 PAXIP1Q6ZW49 1069 aaPredicted RBP27.39■■□□□ 1.98
ECHDC1-203ENST00000368291 USP40Q9NVE5 1235 aa27.39■■□□□ 1.98
ECHDC1-203ENST00000368291 OTOFQ9HC10 1997 aa27.39■■□□□ 1.97
ECHDC1-203ENST00000368291 UBE2Q2LH0YL09 131 aa27.38■■□□□ 1.97
ECHDC1-203ENST00000368291 BTDP43251 543 aa27.38■■□□□ 1.97
ECHDC1-203ENST00000368291 NFIAQ12857 509 aa27.38■■□□□ 1.97
ECHDC1-203ENST00000368291 PRKG1Q13976 671 aa27.38■■□□□ 1.97
ECHDC1-203ENST00000368291 RFX7Q2KHR2 1363 aa27.38■■□□□ 1.97
ECHDC1-203ENST00000368291 LDHCP07864 332 aa27.37■■□□□ 1.97
ECHDC1-203ENST00000368291 ECE1P42892 770 aa27.37■■□□□ 1.97
ECHDC1-203ENST00000368291 GSTO1P78417 241 aa27.37■■□□□ 1.97
ECHDC1-203ENST00000368291 SUPT20HL1Q3ZLR7 823 aa27.37■■□□□ 1.97
ECHDC1-203ENST00000368291 RGMBQ6NW40 437 aa27.37■■□□□ 1.97
ECHDC1-203ENST00000368291 FAM198AQ9UFP1 575 aa27.37■■□□□ 1.97
ECHDC1-203ENST00000368291 FAM155AB1AL88 458 aaPredicted RBP27.36■■□□□ 1.97
ECHDC1-203ENST00000368291 ATP5JP18859 108 aa27.36■■□□□ 1.97
ECHDC1-203ENST00000368291 RHBDL3P58872 404 aa27.36■■□□□ 1.97
ECHDC1-203ENST00000368291 IRX6P78412 446 aaPredicted RBP27.36■■□□□ 1.97
ECHDC1-203ENST00000368291 GRM1Q13255 1194 aa27.36■■□□□ 1.97
ECHDC1-203ENST00000368291 MAP3K11Q16584 847 aa27.36■■□□□ 1.97
ECHDC1-203ENST00000368291 FOCADQ5VW36 1801 aa27.36■■□□□ 1.97
ECHDC1-203ENST00000368291 MYH7P12883 1935 aa27.36■■□□□ 1.97
ECHDC1-203ENST00000368291 IGSF3O75054 1194 aa27.35■■□□□ 1.97
ECHDC1-203ENST00000368291 TTLL12Q14166 644 aaPredicted RBP27.35■■□□□ 1.97
ECHDC1-203ENST00000368291 ADGRA1Q86SQ6 560 aa27.35■■□□□ 1.97
ECHDC1-203ENST00000368291 IDI2Q9BXS1 227 aa27.35■■□□□ 1.97
ECHDC1-203ENST00000368291 ANGEL1Q9UNK9 670 aaKnown RBP27.35■■□□□ 1.97
ECHDC1-203ENST00000368291 RPAP1Q9BWH6 1393 aaPredicted RBP27.35■■□□□ 1.97
ECHDC1-203ENST00000368291 AOC2O75106 756 aa27.35■■□□□ 1.97
ECHDC1-203ENST00000368291 WDHD1O75717 1129 aaPredicted RBP27.35■■□□□ 1.97
ECHDC1-203ENST00000368291 LDLRAD1Q5T700 205 aa27.35■■□□□ 1.97
ECHDC1-203ENST00000368291 NAA16Q6N069 864 aaPredicted RBP27.35■■□□□ 1.97
ECHDC1-203ENST00000368291 ARMC9Q7Z3E5 817 aa27.35■■□□□ 1.97
ECHDC1-203ENST00000368291 FAM151AQ8WW52 585 aa27.35■■□□□ 1.97
ECHDC1-203ENST00000368291 BOLA2Q9H3K6 86 aa27.35■■□□□ 1.97
ECHDC1-203ENST00000368291 USP2O75604 605 aaPredicted RBP27.34■■□□□ 1.97
ECHDC1-203ENST00000368291 IDH1O75874 414 aaKnown RBP27.34■■□□□ 1.97
ECHDC1-203ENST00000368291 TCP10Q12799 353 aa27.34■■□□□ 1.97
ECHDC1-203ENST00000368291 EDC3Q96F86 508 aaKnown RBP27.34■■□□□ 1.97
ECHDC1-203ENST00000368291 ZNF157P51786 506 aaPredicted RBP27.33■■□□□ 1.97
ECHDC1-203ENST00000368291 ZFPM1Q8IX07 1006 aa27.33■■□□□ 1.97
ECHDC1-203ENST00000368291 ZIC5Q96T25 663 aa27.33■■□□□ 1.97
ECHDC1-203ENST00000368291 DNAJC2Q99543 621 aaKnown RBP27.33■■□□□ 1.97
ECHDC1-203ENST00000368291 DDX4Q9NQI0 724 aaKnown RBP27.33■■□□□ 1.97
ECHDC1-203ENST00000368291 PPP1R12BO60237 982 aaPredicted RBP27.32■■□□□ 1.96
ECHDC1-203ENST00000368291 IGHDP01880 384 aa27.32■■□□□ 1.96
ECHDC1-203ENST00000368291 RGS3P49796 1198 aa27.32■■□□□ 1.96
ECHDC1-203ENST00000368291 GCC1Q96CN9 775 aa27.32■■□□□ 1.96
ECHDC1-203ENST00000368291 HAUS7Q99871 368 aa27.32■■□□□ 1.96
ECHDC1-203ENST00000368291 GOLIM4O00461 696 aa27.31■■□□□ 1.96
ECHDC1-203ENST00000368291 SLC10A3P09131 477 aa27.31■■□□□ 1.96
ECHDC1-203ENST00000368291 TTF1Q15361 905 aaPredicted RBP27.31■■□□□ 1.96
ECHDC1-203ENST00000368291 RASAL3Q86YV0 1011 aa27.31■■□□□ 1.96
ECHDC1-203ENST00000368291 ECHDC1Q9NTX5 307 aa27.31■■□□□ 1.96
ECHDC1-203ENST00000368291 ENTPD3O75355 529 aa27.3■■□□□ 1.96
ECHDC1-203ENST00000368291 MAP2K2P36507 400 aa27.3■■□□□ 1.96
ECHDC1-203ENST00000368291 PPP4CP60510 307 aa27.3■■□□□ 1.96
ECHDC1-203ENST00000368291 MAGEB6Q8N7X4 407 aa27.3■■□□□ 1.96
ECHDC1-203ENST00000368291 OTUD7AQ8TE49 926 aaPredicted RBP27.3■■□□□ 1.96
ECHDC1-203ENST00000368291 CCDC102AQ96A19 550 aa27.3■■□□□ 1.96
ECHDC1-203ENST00000368291 AATFQ9NY61 560 aaKnown RBP eCLIP27.3■■□□□ 1.96
ECHDC1-203ENST00000368291 CYP7A1P22680 504 aa27.29■■□□□ 1.96
ECHDC1-203ENST00000368291 MAP3K12Q12852 859 aa27.29■■□□□ 1.96
ECHDC1-203ENST00000368291 PAG1Q9NWQ8 432 aa27.29■■□□□ 1.96
ECHDC1-203ENST00000368291 LAMB1P07942 1786 aa27.28■■□□□ 1.96
ECHDC1-203ENST00000368291 MAP4K4O95819 1239 aaPredicted RBP27.28■■□□□ 1.96
ECHDC1-203ENST00000368291 NOGQ13253 232 aa27.28■■□□□ 1.96
ECHDC1-203ENST00000368291 ANKRD45Q5TZF3 282 aa27.28■■□□□ 1.96
ECHDC1-203ENST00000368291 TSHZ3Q63HK5 1081 aa27.28■■□□□ 1.96
ECHDC1-203ENST00000368291 SH3BP5LQ7L8J4 393 aa27.28■■□□□ 1.96
ECHDC1-203ENST00000368291 SMC5Q8IY18 1101 aa27.28■■□□□ 1.96
ECHDC1-203ENST00000368291 SH3RF3Q8TEJ3 882 aaPredicted RBP27.28■■□□□ 1.96
ECHDC1-203ENST00000368291 RWDD1Q9H446 243 aaPredicted RBP27.28■■□□□ 1.96
ECHDC1-203ENST00000368291 SALL3Q9BXA9 1300 aa27.28■■□□□ 1.96
ECHDC1-203ENST00000368291 CLMNQ96JQ2 1002 aa27.27■■□□□ 1.96
ECHDC1-203ENST00000368291 NPM3O75607 178 aaKnown RBP27.26■■□□□ 1.95
ECHDC1-203ENST00000368291 HSPA1AP0DMV8 641 aaKnown RBP27.26■■□□□ 1.95
ECHDC1-203ENST00000368291 HSPA1BP0DMV9 641 aaKnown RBP27.26■■□□□ 1.95
ECHDC1-203ENST00000368291 IREB2P48200 963 aaKnown RBP27.26■■□□□ 1.95
ECHDC1-203ENST00000368291 PICALMQ13492 652 aa27.26■■□□□ 1.95
ECHDC1-203ENST00000368291 WBP1LQ9NX94 342 aa27.26■■□□□ 1.95
ECHDC1-203ENST00000368291 ATRNL1Q5VV63 1379 aa27.26■■□□□ 1.95
ECHDC1-203ENST00000368291 BAG3O95817 575 aa27.25■■□□□ 1.95
ECHDC1-203ENST00000368291 DYNLL1P63167 89 aaKnown RBP27.25■■□□□ 1.95
ECHDC1-203ENST00000368291 TMED8Q6PL24 325 aaPredicted RBP27.25■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms