RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 HMMRO75330 724 aa18.02■□□□□ 0.48
SF3B5-201ENST00000367569 USP2O75604 605 aaPredicted RBP18.02■□□□□ 0.48
SF3B5-201ENST00000367569 MCAMP43121 646 aa18.02■□□□□ 0.48
SF3B5-201ENST00000367569 SPDYE2Q495Y8 402 aa18.02■□□□□ 0.48
SF3B5-201ENST00000367569 TTC39AQ5SRH9 613 aa18.02■□□□□ 0.48
SF3B5-201ENST00000367569 TBC1D9Q6ZT07 1266 aa18.02■□□□□ 0.48
SF3B5-201ENST00000367569 AACSQ86V21 672 aa18.02■□□□□ 0.48
SF3B5-201ENST00000367569 RPAP2Q8IXW5 612 aaPredicted RBP18.02■□□□□ 0.48
SF3B5-201ENST00000367569 WDR66Q8TBY9 1149 aa18.02■□□□□ 0.48
SF3B5-201ENST00000367569 HMG20BQ9P0W2 317 aa18.02■□□□□ 0.48
SF3B5-201ENST00000367569 ZNF70Q9UC06 446 aaPredicted RBP18.02■□□□□ 0.48
SF3B5-201ENST00000367569 SERPINA10Q9UK55 444 aa18.02■□□□□ 0.48
SF3B5-201ENST00000367569 NDUFB9Q9Y6M9 179 aa18.02■□□□□ 0.48
SF3B5-201ENST00000367569 DOCK2Q92608 1830 aa18.02■□□□□ 0.47
SF3B5-201ENST00000367569 CDAN1Q8IWY9 1227 aa18.01■□□□□ 0.47
SF3B5-201ENST00000367569 RHPN1Q8TCX5 695 aa18.01■□□□□ 0.47
SF3B5-201ENST00000367569 TEKT1Q969V4 418 aa18.01■□□□□ 0.47
SF3B5-201ENST00000367569 WNK4Q96J92 1243 aa18.01■□□□□ 0.47
SF3B5-201ENST00000367569 TCP10L2B9ZVM9 353 aa18■□□□□ 0.47
SF3B5-201ENST00000367569 SEMA3EO15041 775 aa18■□□□□ 0.47
SF3B5-201ENST00000367569 LDHBP07195 334 aaKnown RBP18■□□□□ 0.47
SF3B5-201ENST00000367569 ARID4AP29374 1257 aaPredicted RBP18■□□□□ 0.47
SF3B5-201ENST00000367569 SOX10P56693 466 aa18■□□□□ 0.47
SF3B5-201ENST00000367569 NOM1Q5C9Z4 860 aaKnown RBP18■□□□□ 0.47
SF3B5-201ENST00000367569 SPATA5Q8NB90 893 aa18■□□□□ 0.47
SF3B5-201ENST00000367569 CFHR5Q9BXR6 569 aa18■□□□□ 0.47
SF3B5-201ENST00000367569 CHMP4BQ9H444 224 aaKnown RBP18■□□□□ 0.47
SF3B5-201ENST00000367569 AK9Q5TCS8 1911 aa18■□□□□ 0.47
SF3B5-201ENST00000367569 MANSC4A6NHS7 340 aaPredicted RBP17.99■□□□□ 0.47
SF3B5-201ENST00000367569 SMARCA5O60264 1052 aaPredicted RBP17.99■□□□□ 0.47
SF3B5-201ENST00000367569 ZBTB48P10074 688 aaPredicted RBP17.99■□□□□ 0.47
SF3B5-201ENST00000367569 IREB2P48200 963 aaKnown RBP17.99■□□□□ 0.47
SF3B5-201ENST00000367569 IRX6P78412 446 aaPredicted RBP17.99■□□□□ 0.47
SF3B5-201ENST00000367569 ERC1Q8IUD2 1116 aa17.99■□□□□ 0.47
SF3B5-201ENST00000367569 GPR108Q9NPR9 543 aa17.99■□□□□ 0.47
SF3B5-201ENST00000367569 HPS5Q9UPZ3 1129 aa17.99■□□□□ 0.47
SF3B5-201ENST00000367569 DAGLAQ9Y4D2 1042 aa17.99■□□□□ 0.47
SF3B5-201ENST00000367569 PCDHB15Q9Y5E8 787 aa17.99■□□□□ 0.47
SF3B5-201ENST00000367569 CDK5RAP2Q96SN8 1893 aa17.99■□□□□ 0.47
SF3B5-201ENST00000367569 MAST3O60307 1309 aa17.98■□□□□ 0.47
SF3B5-201ENST00000367569 SALL1Q9NSC2 1324 aa17.98■□□□□ 0.47
SF3B5-201ENST00000367569 UNCXA6NJT0 531 aa17.98■□□□□ 0.47
SF3B5-201ENST00000367569 IGF2BP3O00425 579 aaKnown RBP eCLIP17.98■□□□□ 0.47
SF3B5-201ENST00000367569 GJA5P36382 358 aa17.98■□□□□ 0.47
SF3B5-201ENST00000367569 INHBEP58166 350 aa17.98■□□□□ 0.47
SF3B5-201ENST00000367569 DZIP1Q86YF9 867 aaKnown RBP17.98■□□□□ 0.47
SF3B5-201ENST00000367569 IFNL1Q8IU54 200 aa17.98■□□□□ 0.47
SF3B5-201ENST00000367569 TEPSINQ96N21 525 aa17.98■□□□□ 0.47
SF3B5-201ENST00000367569 LAMB1P07942 1786 aa17.97■□□□□ 0.47
SF3B5-201ENST00000367569 PDE4DIPQ5VU43 2346 aa17.97■□□□□ 0.47
SF3B5-201ENST00000367569 FKTNO75072 461 aa17.97■□□□□ 0.47
SF3B5-201ENST00000367569 ALDH1A1P00352 501 aa17.97■□□□□ 0.47
SF3B5-201ENST00000367569 TNFAIP1Q13829 316 aa17.97■□□□□ 0.47
SF3B5-201ENST00000367569 PKN2Q16513 984 aaKnown RBP17.97■□□□□ 0.47
SF3B5-201ENST00000367569 ANKRD13AQ8IZ07 590 aa17.97■□□□□ 0.47
SF3B5-201ENST00000367569 TMEM39BQ9GZU3 492 aa17.97■□□□□ 0.47
SF3B5-201ENST00000367569 SUPT16HQ9Y5B9 1047 aaKnown RBP17.97■□□□□ 0.47
SF3B5-201ENST00000367569 TNRC18O15417 2968 aaPredicted RBP17.97■□□□□ 0.47
SF3B5-201ENST00000367569 UQCRFS1P1P0C7P4 283 aa17.96■□□□□ 0.47
SF3B5-201ENST00000367569 ZAP70P43403 619 aa17.96■□□□□ 0.47
SF3B5-201ENST00000367569 CCDC158Q5M9N0 1113 aa17.96■□□□□ 0.47
SF3B5-201ENST00000367569 APOBEC3HQ6NTF7 200 aaKnown RBP17.96■□□□□ 0.47
SF3B5-201ENST00000367569 ZNF384Q8TF68 577 aa17.96■□□□□ 0.47
SF3B5-201ENST00000367569 KIF1BPQ96EK5 621 aa17.96■□□□□ 0.47
SF3B5-201ENST00000367569 ZDHHC15Q96MV8 337 aa17.96■□□□□ 0.47
SF3B5-201ENST00000367569 RAI14Q9P0K7 980 aa17.96■□□□□ 0.47
SF3B5-201ENST00000367569 PDS5AQ29RF7 1337 aaKnown RBP17.96■□□□□ 0.46
SF3B5-201ENST00000367569 HDLBPQ00341 1268 aaKnown RBP17.95■□□□□ 0.46
SF3B5-201ENST00000367569 MECOMQ03112 1051 aa17.95■□□□□ 0.46
SF3B5-201ENST00000367569 HSP90AB4PQ58FF6 505 aa17.95■□□□□ 0.46
SF3B5-201ENST00000367569 ELP3Q9H9T3 547 aa17.95■□□□□ 0.46
SF3B5-201ENST00000367569 PIH1D3Q9NQM4 214 aaKnown RBP17.95■□□□□ 0.46
SF3B5-201ENST00000367569 SUGT1Q9Y2Z0 365 aa17.95■□□□□ 0.46
SF3B5-201ENST00000367569 ERICH6Q7L0X2 663 aa17.94■□□□□ 0.46
SF3B5-201ENST00000367569 ZGPATQ8N5A5 531 aaKnown RBP17.94■□□□□ 0.46
SF3B5-201ENST00000367569 EXOC6Q8TAG9 804 aa17.94■□□□□ 0.46
SF3B5-201ENST00000367569 PTPN18Q99952 460 aa17.94■□□□□ 0.46
SF3B5-201ENST00000367569 MYH7P12883 1935 aa17.94■□□□□ 0.46
SF3B5-201ENST00000367569 CYP2E1P05181 493 aaPredicted RBP17.93■□□□□ 0.46
SF3B5-201ENST00000367569 IFIT2P09913 472 aaKnown RBP17.93■□□□□ 0.46
SF3B5-201ENST00000367569 TNNI2P48788 182 aa17.93■□□□□ 0.46
SF3B5-201ENST00000367569 TCP10Q12799 353 aa17.93■□□□□ 0.46
SF3B5-201ENST00000367569 NFIAQ12857 509 aa17.93■□□□□ 0.46
SF3B5-201ENST00000367569 CDC42EP5Q6NZY7 148 aa17.93■□□□□ 0.46
SF3B5-201ENST00000367569 FBXO46Q6PJ61 603 aaPredicted RBP17.93■□□□□ 0.46
SF3B5-201ENST00000367569 HHIPL2Q6UWX4 724 aa17.93■□□□□ 0.46
SF3B5-201ENST00000367569 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.93■□□□□ 0.46
SF3B5-201ENST00000367569 CLASRPQ8N2M8 674 aaKnown RBP17.93■□□□□ 0.46
SF3B5-201ENST00000367569 OPTNQ96CV9 577 aa17.93■□□□□ 0.46
SF3B5-201ENST00000367569 TMOD2Q9NZR1 351 aa17.93■□□□□ 0.46
SF3B5-201ENST00000367569 LRP2BPQ9P2M1 347 aa17.93■□□□□ 0.46
SF3B5-201ENST00000367569 MROH7-TTC4A0A0A0MT08 1334 aa17.93■□□□□ 0.46
SF3B5-201ENST00000367569 FOCADQ5VW36 1801 aa17.93■□□□□ 0.46
SF3B5-201ENST00000367569 TESPA1A2RU30 521 aaPredicted RBP17.92■□□□□ 0.46
SF3B5-201ENST00000367569 BTDP43251 543 aa17.92■□□□□ 0.46
SF3B5-201ENST00000367569 CNKSR2Q8WXI2 1034 aa17.92■□□□□ 0.46
SF3B5-201ENST00000367569 MRIQ9BWK5 157 aa17.92■□□□□ 0.46
SF3B5-201ENST00000367569 LRRCC1Q9C099 1032 aa17.92■□□□□ 0.46
SF3B5-201ENST00000367569 ANTXR1Q9H6X2 564 aa17.92■□□□□ 0.46
SF3B5-201ENST00000367569 GAKO14976 1311 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms