RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 ZBTB38Q8NAP3 1195 aaPredicted RBP17.11■□□□□ 0.33
PRKN-204ENST00000366896 FBXO3Q9UK99 471 aa17.11■□□□□ 0.33
PRKN-204ENST00000366896 NAP1L2Q9ULW6 460 aaPredicted RBP17.11■□□□□ 0.33
PRKN-204ENST00000366896 QSER1Q2KHR3 1735 aa17.11■□□□□ 0.33
PRKN-204ENST00000366896 COL24A1Q17RW2 1714 aa17.11■□□□□ 0.33
PRKN-204ENST00000366896 PNPLA7Q6ZV29 1317 aa17.11■□□□□ 0.33
PRKN-204ENST00000366896 GUCY1B3Q02153 619 aa17.11■□□□□ 0.33
PRKN-204ENST00000366896 IQCB1Q15051 598 aa17.11■□□□□ 0.33
PRKN-204ENST00000366896 KMT5BQ4FZB7 885 aa17.11■□□□□ 0.33
PRKN-204ENST00000366896 TTLL5Q6EMB2 1281 aa17.11■□□□□ 0.33
PRKN-204ENST00000366896 FLAD1Q8NFF5 587 aa17.11■□□□□ 0.33
PRKN-204ENST00000366896 USP28Q96RU2 1077 aa17.11■□□□□ 0.33
PRKN-204ENST00000366896 STK32BQ9NY57 414 aa17.11■□□□□ 0.33
PRKN-204ENST00000366896 A0A087WWV3 80 aa17.1■□□□□ 0.33
PRKN-204ENST00000366896 M0R2C6 588 aa17.1■□□□□ 0.33
PRKN-204ENST00000366896 GYS1P13807 737 aa17.1■□□□□ 0.33
PRKN-204ENST00000366896 LRRFIP1Q32MZ4 808 aaKnown RBP17.1■□□□□ 0.33
PRKN-204ENST00000366896 CCAR1Q8IX12 1150 aaKnown RBP17.1■□□□□ 0.33
PRKN-204ENST00000366896 ZNF592Q92610 1267 aa17.1■□□□□ 0.33
PRKN-204ENST00000366896 FAM89AQ96GI7 184 aa17.1■□□□□ 0.33
PRKN-204ENST00000366896 MRFAP1L1Q96HT8 127 aa17.1■□□□□ 0.33
PRKN-204ENST00000366896 EYA2O00167 538 aa17.1■□□□□ 0.33
PRKN-204ENST00000366896 STX1AQ16623 288 aa17.1■□□□□ 0.33
PRKN-204ENST00000366896 PUS3Q9BZE2 481 aaKnown RBP17.1■□□□□ 0.33
PRKN-204ENST00000366896 ZNF215Q9UL58 517 aaPredicted RBP17.1■□□□□ 0.33
PRKN-204ENST00000366896 USP27XA6NNY8 438 aa17.09■□□□□ 0.33
PRKN-204ENST00000366896 RNF113AO15541 343 aaKnown RBP17.09■□□□□ 0.33
PRKN-204ENST00000366896 BICDL1Q6ZP65 573 aa17.09■□□□□ 0.33
PRKN-204ENST00000366896 ENGASEQ8NFI3 743 aa17.09■□□□□ 0.33
PRKN-204ENST00000366896 TRMT112Q9UI30 125 aaKnown RBP17.09■□□□□ 0.33
PRKN-204ENST00000366896 CDHR2Q9BYE9 1310 aa17.09■□□□□ 0.33
PRKN-204ENST00000366896 A0A1B0GUL7 405 aa17.09■□□□□ 0.33
PRKN-204ENST00000366896 IFIT1P09914 478 aaKnown RBP17.09■□□□□ 0.33
PRKN-204ENST00000366896 PDIA3P30101 505 aaKnown RBP17.09■□□□□ 0.33
PRKN-204ENST00000366896 PTPN14Q15678 1187 aa17.09■□□□□ 0.33
PRKN-204ENST00000366896 SYNE4Q8N205 404 aa17.09■□□□□ 0.33
PRKN-204ENST00000366896 UTP14AQ9BVJ6 771 aaKnown RBP17.09■□□□□ 0.33
PRKN-204ENST00000366896 GPHNQ9NQX3 736 aaPredicted RBP17.09■□□□□ 0.33
PRKN-204ENST00000366896 NTSR2O95665 410 aa17.08■□□□□ 0.33
PRKN-204ENST00000366896 SNW1Q13573 536 aaKnown RBP17.08■□□□□ 0.33
PRKN-204ENST00000366896 FAM160A1Q05DH4 1040 aa17.08■□□□□ 0.32
PRKN-204ENST00000366896 CCDC73Q6ZRK6 1079 aa17.08■□□□□ 0.32
PRKN-204ENST00000366896 ERO1AQ96HE7 468 aa17.08■□□□□ 0.32
PRKN-204ENST00000366896 ABCC12Q96J65 1359 aa17.08■□□□□ 0.32
PRKN-204ENST00000366896 GOLGA6L19H0YKK7 550 aa17.07■□□□□ 0.32
PRKN-204ENST00000366896 ARID5BQ14865 1188 aa17.07■□□□□ 0.32
PRKN-204ENST00000366896 OSBP2Q969R2 916 aa17.07■□□□□ 0.32
PRKN-204ENST00000366896 SETDB2Q96T68 719 aa17.07■□□□□ 0.32
PRKN-204ENST00000366896 ZFYP08048 801 aaPredicted RBP17.07■□□□□ 0.32
PRKN-204ENST00000366896 NFIXQ14938 502 aa17.07■□□□□ 0.32
PRKN-204ENST00000366896 PLA2G12BQ9BX93 195 aa17.07■□□□□ 0.32
PRKN-204ENST00000366896 KCND1Q9NSA2 647 aa17.07■□□□□ 0.32
PRKN-204ENST00000366896 ANO10Q9NW15 660 aa17.07■□□□□ 0.32
PRKN-204ENST00000366896 CARMIL3Q8ND23 1372 aa17.07■□□□□ 0.32
PRKN-204ENST00000366896 A0A1W2PQ27 194 aa17.06■□□□□ 0.32
PRKN-204ENST00000366896 A0A1W2PQ64 194 aa17.06■□□□□ 0.32
PRKN-204ENST00000366896 A0A1W2PQD8 194 aa17.06■□□□□ 0.32
PRKN-204ENST00000366896 FOXP2O15409 715 aa17.06■□□□□ 0.32
PRKN-204ENST00000366896 SKILP12757 684 aa17.06■□□□□ 0.32
PRKN-204ENST00000366896 FBXO38Q6PIJ6 1188 aa17.06■□□□□ 0.32
PRKN-204ENST00000366896 ERCC4Q92889 916 aaPredicted RBP17.06■□□□□ 0.32
PRKN-204ENST00000366896 FDPSP14324 419 aaKnown RBP17.06■□□□□ 0.32
PRKN-204ENST00000366896 CCZ1BP86790 482 aa17.06■□□□□ 0.32
PRKN-204ENST00000366896 CCZ1P86791 482 aaPredicted RBP17.06■□□□□ 0.32
PRKN-204ENST00000366896 RTEL1Q9NZ71 1219 aa17.06■□□□□ 0.32
PRKN-204ENST00000366896 DDX60Q8IY21 1712 aaKnown RBP17.05■□□□□ 0.32
PRKN-204ENST00000366896 CCDC66A2RUB6 948 aa17.05■□□□□ 0.32
PRKN-204ENST00000366896 IRS4O14654 1257 aaPredicted RBP17.05■□□□□ 0.32
PRKN-204ENST00000366896 KINO60870 393 aaKnown RBP17.05■□□□□ 0.32
PRKN-204ENST00000366896 ADORA1P30542 326 aa17.05■□□□□ 0.32
PRKN-204ENST00000366896 HAND2P61296 217 aa17.05■□□□□ 0.32
PRKN-204ENST00000366896 FKBP4Q02790 459 aaKnown RBP eCLIP17.05■□□□□ 0.32
PRKN-204ENST00000366896 TMEM51Q9NW97 253 aa17.05■□□□□ 0.32
PRKN-204ENST00000366896 LAMB2P55268 1798 aa17.05■□□□□ 0.32
PRKN-204ENST00000366896 WDR19Q8NEZ3 1342 aa17.05■□□□□ 0.32
PRKN-204ENST00000366896 FAM193AP78312 1265 aa17.05■□□□□ 0.32
PRKN-204ENST00000366896 OTUD7BQ6GQQ9 843 aa17.05■□□□□ 0.32
PRKN-204ENST00000366896 FSIP1Q8NA03 581 aa17.05■□□□□ 0.32
PRKN-204ENST00000366896 MYH3P11055 1940 aa17.04■□□□□ 0.32
PRKN-204ENST00000366896 CCDC69A6NI79 296 aa17.04■□□□□ 0.32
PRKN-204ENST00000366896 GTF2E1P29083 439 aaPredicted RBP17.04■□□□□ 0.32
PRKN-204ENST00000366896 TM4SF1P30408 202 aa17.04■□□□□ 0.32
PRKN-204ENST00000366896 ME1P48163 572 aa17.04■□□□□ 0.32
PRKN-204ENST00000366896 ELF2Q15723 593 aa17.04■□□□□ 0.32
PRKN-204ENST00000366896 ADALQ6DHV7 355 aa17.04■□□□□ 0.32
PRKN-204ENST00000366896 ILDR2Q71H61 639 aa17.04■□□□□ 0.32
PRKN-204ENST00000366896 CCAR2Q8N163 923 aaKnown RBP17.04■□□□□ 0.32
PRKN-204ENST00000366896 BBXQ8WY36 941 aaPredicted RBP17.04■□□□□ 0.32
PRKN-204ENST00000366896 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.04■□□□□ 0.32
PRKN-204ENST00000366896 V9GYY5 206 aaPredicted RBP17.04■□□□□ 0.32
PRKN-204ENST00000366896 AKAP2Q9Y2D5 859 aa17.04■□□□□ 0.32
PRKN-204ENST00000366896 DHX16O60231 1041 aaKnown RBP17.03■□□□□ 0.32
PRKN-204ENST00000366896 SLU7O95391 586 aaKnown RBP17.03■□□□□ 0.32
PRKN-204ENST00000366896 SCARF1Q14162 830 aa17.03■□□□□ 0.32
PRKN-204ENST00000366896 NBPF5PQ86XG9 351 aaPredicted RBP17.03■□□□□ 0.32
PRKN-204ENST00000366896 DHX40Q8IX18 779 aaKnown RBP17.03■□□□□ 0.32
PRKN-204ENST00000366896 FBXW7Q969H0 707 aa17.03■□□□□ 0.32
PRKN-204ENST00000366896 CCDC85AQ96PX6 553 aaPredicted RBP17.03■□□□□ 0.32
PRKN-204ENST00000366896 NYXQ9GZU5 481 aa17.03■□□□□ 0.32
PRKN-204ENST00000366896 KIF2AO00139 706 aaPredicted RBP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms