RNA–Protein interactions for RNA: ENST00000366731.9

MRPL55-205, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 2 BASIC

Gene MRPL55, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-205ENST00000366731 SIRT2Q8IXJ6 389 aa16.8■□□□□ 0.28
MRPL55-205ENST00000366731 EAF2Q96CJ1 260 aaPredicted RBP16.8■□□□□ 0.28
MRPL55-205ENST00000366731 PRDM10Q9NQV6 1147 aa16.8■□□□□ 0.28
MRPL55-205ENST00000366731 TLR7Q9NYK1 1049 aaKnown RBP16.8■□□□□ 0.28
MRPL55-205ENST00000366731 TRPA1O75762 1119 aa16.79■□□□□ 0.28
MRPL55-205ENST00000366731 IREB2P48200 963 aaKnown RBP16.79■□□□□ 0.28
MRPL55-205ENST00000366731 MECOMQ03112 1051 aa16.79■□□□□ 0.28
MRPL55-205ENST00000366731 RPAP2Q8IXW5 612 aaPredicted RBP16.79■□□□□ 0.28
MRPL55-205ENST00000366731 IL1RAPL2Q9NP60 686 aa16.79■□□□□ 0.28
MRPL55-205ENST00000366731 RAI14Q9P0K7 980 aa16.79■□□□□ 0.28
MRPL55-205ENST00000366731 NFIAQ12857 509 aa16.79■□□□□ 0.28
MRPL55-205ENST00000366731 MAP3K11Q16584 847 aa16.79■□□□□ 0.28
MRPL55-205ENST00000366731 AACSQ86V21 672 aa16.79■□□□□ 0.28
MRPL55-205ENST00000366731 CHMP4BQ9H444 224 aaKnown RBP16.79■□□□□ 0.28
MRPL55-205ENST00000366731 RNF186Q9NXI6 227 aa16.79■□□□□ 0.28
MRPL55-205ENST00000366731 LRP2BPQ9P2M1 347 aa16.79■□□□□ 0.28
MRPL55-205ENST00000366731 DBNLQ9UJU6 430 aaKnown RBP16.79■□□□□ 0.28
MRPL55-205ENST00000366731 PDS5AQ29RF7 1337 aaKnown RBP16.78■□□□□ 0.28
MRPL55-205ENST00000366731 THSD7BQ9C0I4 1608 aa16.78■□□□□ 0.28
MRPL55-205ENST00000366731 ARAP2Q8WZ64 1704 aa16.78■□□□□ 0.28
MRPL55-205ENST00000366731 CA12O43570 354 aa16.78■□□□□ 0.28
MRPL55-205ENST00000366731 HMMRO75330 724 aa16.78■□□□□ 0.28
MRPL55-205ENST00000366731 SPRYD7Q5W111 196 aa16.78■□□□□ 0.28
MRPL55-205ENST00000366731 MIGA2Q7L4E1 593 aa16.78■□□□□ 0.28
MRPL55-205ENST00000366731 FAM83AQ86UY5 434 aa16.78■□□□□ 0.28
MRPL55-205ENST00000366731 ERC1Q8IUD2 1116 aa16.78■□□□□ 0.28
MRPL55-205ENST00000366731 ZBTB22O15209 634 aa16.77■□□□□ 0.27
MRPL55-205ENST00000366731 BTDP43251 543 aa16.77■□□□□ 0.27
MRPL55-205ENST00000366731 HSP90AB4PQ58FF6 505 aa16.77■□□□□ 0.27
MRPL55-205ENST00000366731 IFFO2Q5TF58 517 aa16.77■□□□□ 0.27
MRPL55-205ENST00000366731 FKBP1CQ5VVH2 108 aa16.77■□□□□ 0.27
MRPL55-205ENST00000366731 ZFPM1Q8IX07 1006 aa16.77■□□□□ 0.27
MRPL55-205ENST00000366731 SLF2Q8IX21 1173 aa16.77■□□□□ 0.27
MRPL55-205ENST00000366731 ANKRD13AQ8IZ07 590 aa16.77■□□□□ 0.27
MRPL55-205ENST00000366731 RHPN1Q8TCX5 695 aa16.77■□□□□ 0.27
MRPL55-205ENST00000366731 ZNF384Q8TF68 577 aa16.77■□□□□ 0.27
MRPL55-205ENST00000366731 ELP3Q9H9T3 547 aa16.77■□□□□ 0.27
MRPL55-205ENST00000366731 CAPN15O75808 1086 aa16.76■□□□□ 0.27
MRPL55-205ENST00000366731 ZAP70P43403 619 aa16.76■□□□□ 0.27
MRPL55-205ENST00000366731 FAM151AQ8WW52 585 aa16.76■□□□□ 0.27
MRPL55-205ENST00000366731 WNK4Q96J92 1243 aa16.76■□□□□ 0.27
MRPL55-205ENST00000366731 FAM198AQ9UFP1 575 aa16.76■□□□□ 0.27
MRPL55-205ENST00000366731 GAKO14976 1311 aa16.75■□□□□ 0.27
MRPL55-205ENST00000366731 MAP3K9P80192 1104 aa16.75■□□□□ 0.27
MRPL55-205ENST00000366731 PICALMQ13492 652 aa16.75■□□□□ 0.27
MRPL55-205ENST00000366731 NSUN4Q96CB9 384 aaKnown RBP16.75■□□□□ 0.27
MRPL55-205ENST00000366731 NDUFB9Q9Y6M9 179 aa16.75■□□□□ 0.27
MRPL55-205ENST00000366731 MROH7-TTC4A0A0A0MT08 1334 aa16.75■□□□□ 0.27
MRPL55-205ENST00000366731 MYH13Q9UKX3 1938 aa16.74■□□□□ 0.27
MRPL55-205ENST00000366731 TBC1D8O95759 1140 aa16.74■□□□□ 0.27
MRPL55-205ENST00000366731 CYP2E1P05181 493 aaPredicted RBP16.74■□□□□ 0.27
MRPL55-205ENST00000366731 GJA5P36382 358 aa16.74■□□□□ 0.27
MRPL55-205ENST00000366731 RGS3P49796 1198 aa16.74■□□□□ 0.27
MRPL55-205ENST00000366731 GSTO1P78417 241 aa16.74■□□□□ 0.27
MRPL55-205ENST00000366731 VGLL4Q14135 290 aa16.74■□□□□ 0.27
MRPL55-205ENST00000366731 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.74■□□□□ 0.27
MRPL55-205ENST00000366731 ZSCAN29Q8IWY8 852 aaPredicted RBP16.74■□□□□ 0.27
MRPL55-205ENST00000366731 REM2Q8IYK8 340 aaPredicted RBP16.74■□□□□ 0.27
MRPL55-205ENST00000366731 CNKSR2Q8WXI2 1034 aa16.74■□□□□ 0.27
MRPL55-205ENST00000366731 FAM163AQ96GL9 167 aaPredicted RBP16.74■□□□□ 0.27
MRPL55-205ENST00000366731 WRNIP1Q96S55 665 aa16.74■□□□□ 0.27
MRPL55-205ENST00000366731 PIH1D3Q9NQM4 214 aaKnown RBP16.74■□□□□ 0.27
MRPL55-205ENST00000366731 ECM29Q5VYK3 1845 aa16.74■□□□□ 0.27
MRPL55-205ENST00000366731 LDHCP07864 332 aa16.73■□□□□ 0.27
MRPL55-205ENST00000366731 CLASRPQ8N2M8 674 aaKnown RBP16.73■□□□□ 0.27
MRPL55-205ENST00000366731 ZKSCAN4Q969J2 545 aaPredicted RBP16.73■□□□□ 0.27
MRPL55-205ENST00000366731 OPTNQ96CV9 577 aa16.73■□□□□ 0.27
MRPL55-205ENST00000366731 KIF1BPQ96EK5 621 aa16.73■□□□□ 0.27
MRPL55-205ENST00000366731 CSADQ9Y600 493 aa16.73■□□□□ 0.27
MRPL55-205ENST00000366731 GPR75-ASB3A0A0A6YYF3 556 aa16.72■□□□□ 0.27
MRPL55-205ENST00000366731 IFIT2P09913 472 aaKnown RBP16.72■□□□□ 0.27
MRPL55-205ENST00000366731 TM4SF4P48230 202 aa16.72■□□□□ 0.27
MRPL55-205ENST00000366731 SREBF2Q12772 1141 aa16.72■□□□□ 0.27
MRPL55-205ENST00000366731 DCAF15Q66K64 600 aa16.72■□□□□ 0.27
MRPL55-205ENST00000366731 NAA16Q6N069 864 aaPredicted RBP16.72■□□□□ 0.27
MRPL55-205ENST00000366731 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.72■□□□□ 0.273e-6■■■■□ 21.3
MRPL55-205ENST00000366731 HOOK2Q96ED9 719 aa16.72■□□□□ 0.27
MRPL55-205ENST00000366731 ZNF512BQ96KM6 892 aaPredicted RBP16.72■□□□□ 0.27
MRPL55-205ENST00000366731 DDX4Q9NQI0 724 aaKnown RBP16.72■□□□□ 0.27
MRPL55-205ENST00000366731 SAGE1Q9NXZ1 904 aa16.72■□□□□ 0.27
MRPL55-205ENST00000366731 MANSC4A6NHS7 340 aaPredicted RBP16.71■□□□□ 0.27
MRPL55-205ENST00000366731 UNCXA6NJT0 531 aa16.71■□□□□ 0.27
MRPL55-205ENST00000366731 RAB11FIP3O75154 756 aa16.71■□□□□ 0.27
MRPL55-205ENST00000366731 WDHD1O75717 1129 aaPredicted RBP16.71■□□□□ 0.27
MRPL55-205ENST00000366731 RRP1P56182 461 aaKnown RBP16.71■□□□□ 0.27
MRPL55-205ENST00000366731 IDI2Q9BXS1 227 aa16.71■□□□□ 0.27
MRPL55-205ENST00000366731 ZNF341Q9BYN7 854 aa16.71■□□□□ 0.27
MRPL55-205ENST00000366731 IDH1O75874 414 aaKnown RBP16.7■□□□□ 0.26
MRPL55-205ENST00000366731 SLURP2P0DP57 97 aa16.7■□□□□ 0.26
MRPL55-205ENST00000366731 ZBTB48P10074 688 aaPredicted RBP16.7■□□□□ 0.26
MRPL55-205ENST00000366731 INPP5BP32019 993 aa16.7■□□□□ 0.26
MRPL55-205ENST00000366731 RHBDL3P58872 404 aa16.7■□□□□ 0.26
MRPL55-205ENST00000366731 OTUD5Q96G74 571 aa16.7■□□□□ 0.26
MRPL55-205ENST00000366731 ANTXR1Q9H6X2 564 aa16.7■□□□□ 0.26
MRPL55-205ENST00000366731 DDTLA6NHG4 134 aaPredicted RBP16.7■□□□□ 0.26
MRPL55-205ENST00000366731 SMARCA5O60264 1052 aaPredicted RBP16.7■□□□□ 0.26
MRPL55-205ENST00000366731 ENTPD3O75355 529 aa16.7■□□□□ 0.26
MRPL55-205ENST00000366731 SH3BP5LQ7L8J4 393 aa16.7■□□□□ 0.26
MRPL55-205ENST00000366731 SH3RF3Q8TEJ3 882 aaPredicted RBP16.7■□□□□ 0.26
MRPL55-205ENST00000366731 NOL10Q9BSC4 688 aaKnown RBP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms