RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 UBE3BQ7Z3V4 1068 aa10.97□□□□□ -0.65
HMGB1P39-201ENST00000366304 C8orf58Q8NAV2 365 aa10.97□□□□□ -0.65
HMGB1P39-201ENST00000366304 ZKSCAN4Q969J2 545 aaPredicted RBP10.97□□□□□ -0.65
HMGB1P39-201ENST00000366304 GDF15Q99988 308 aa10.97□□□□□ -0.65
HMGB1P39-201ENST00000366304 MTMR10Q9NXD2 777 aa10.97□□□□□ -0.65
HMGB1P39-201ENST00000366304 MYO1BO43795 1136 aa10.96□□□□□ -0.65
HMGB1P39-201ENST00000366304 GNRH1P01148 92 aa10.96□□□□□ -0.65
HMGB1P39-201ENST00000366304 CETPP11597 493 aa10.96□□□□□ -0.65
HMGB1P39-201ENST00000366304 IGHMBP2P38935 993 aaKnown RBP10.96□□□□□ -0.65
HMGB1P39-201ENST00000366304 RBM5P52756 815 aaKnown RBP eCLIP10.96□□□□□ -0.65
HMGB1P39-201ENST00000366304 CACNB3P54284 484 aa10.96□□□□□ -0.65
HMGB1P39-201ENST00000366304 CASP7P55210 303 aa10.96□□□□□ -0.65
HMGB1P39-201ENST00000366304 PRMT2P55345 433 aa10.96□□□□□ -0.65
HMGB1P39-201ENST00000366304 PRKCZQ05513 592 aa10.96□□□□□ -0.65
HMGB1P39-201ENST00000366304 MOGSQ13724 837 aa10.96□□□□□ -0.65
HMGB1P39-201ENST00000366304 KIF22Q14807 665 aa10.96□□□□□ -0.65
HMGB1P39-201ENST00000366304 C15orf52Q6ZUT6 534 aaKnown RBP10.96□□□□□ -0.65
HMGB1P39-201ENST00000366304 ANKRD2Q9GZV1 360 aa10.96□□□□□ -0.65
HMGB1P39-201ENST00000366304 GABRQQ9UN88 632 aa10.96□□□□□ -0.65
HMGB1P39-201ENST00000366304 STXBP5LQ9Y2K9 1186 aa10.96□□□□□ -0.65
HMGB1P39-201ENST00000366304 MYPNQ86TC9 1320 aa10.95□□□□□ -0.66
HMGB1P39-201ENST00000366304 PI4KAP2A4QPH2 592 aa10.95□□□□□ -0.66
HMGB1P39-201ENST00000366304 NEURL1BA8MQ27 555 aa10.95□□□□□ -0.66
HMGB1P39-201ENST00000366304 EVI5O60447 810 aa10.95□□□□□ -0.66
HMGB1P39-201ENST00000366304 SGPL1O95470 568 aa10.95□□□□□ -0.66
HMGB1P39-201ENST00000366304 CSF1RP07333 972 aa10.95□□□□□ -0.66
HMGB1P39-201ENST00000366304 FKBP1AP62942 108 aaKnown RBP10.95□□□□□ -0.66
HMGB1P39-201ENST00000366304 PI4KAP1Q8N8J0 262 aa10.95□□□□□ -0.66
HMGB1P39-201ENST00000366304 NKX2-3Q8TAU0 364 aa10.95□□□□□ -0.66
HMGB1P39-201ENST00000366304 DIS3LQ8TF46 1054 aaKnown RBP10.95□□□□□ -0.66
HMGB1P39-201ENST00000366304 ALPK3Q96L96 1907 aa10.95□□□□□ -0.66
HMGB1P39-201ENST00000366304 FMNL1O95466 1100 aaPredicted RBP10.94□□□□□ -0.66
HMGB1P39-201ENST00000366304 ELNP15502 786 aa10.94□□□□□ -0.66
HMGB1P39-201ENST00000366304 KCNJ4P48050 445 aa10.94□□□□□ -0.66
HMGB1P39-201ENST00000366304 BCAMP50895 628 aa10.94□□□□□ -0.66
HMGB1P39-201ENST00000366304 DZIP1LQ8IYY4 767 aaKnown RBP10.94□□□□□ -0.66
HMGB1P39-201ENST00000366304 SLAIN1Q8ND83 568 aa10.94□□□□□ -0.66
HMGB1P39-201ENST00000366304 RAET1EQ8TD07 263 aa10.94□□□□□ -0.66
HMGB1P39-201ENST00000366304 ZCCHC17Q9NP64 241 aaKnown RBP10.94□□□□□ -0.66
HMGB1P39-201ENST00000366304 ZMYND8Q9ULU4 1186 aaPredicted RBP10.94□□□□□ -0.66
HMGB1P39-201ENST00000366304 CSADQ9Y600 493 aa10.94□□□□□ -0.66
HMGB1P39-201ENST00000366304 ARAP2Q8WZ64 1704 aa10.94□□□□□ -0.66
HMGB1P39-201ENST00000366304 FAM205AQ6ZU69 1335 aa10.93□□□□□ -0.66
HMGB1P39-201ENST00000366304 PDHXO00330 501 aa10.93□□□□□ -0.66
HMGB1P39-201ENST00000366304 BMP8BP34820 402 aa10.93□□□□□ -0.66
HMGB1P39-201ENST00000366304 PPIL2Q13356 520 aa10.93□□□□□ -0.66
HMGB1P39-201ENST00000366304 SNAPC2Q13487 334 aa10.93□□□□□ -0.66
HMGB1P39-201ENST00000366304 GPR153Q6NV75 609 aa10.93□□□□□ -0.66
HMGB1P39-201ENST00000366304 KSR2Q6VAB6 950 aa10.93□□□□□ -0.66
HMGB1P39-201ENST00000366304 G2E3Q7L622 706 aa10.93□□□□□ -0.66
HMGB1P39-201ENST00000366304 ERO1BQ86YB8 467 aa10.93□□□□□ -0.66
HMGB1P39-201ENST00000366304 TSPYL6Q8N831 410 aa10.93□□□□□ -0.66
HMGB1P39-201ENST00000366304 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.93□□□□□ -0.66
HMGB1P39-201ENST00000366304 WRNIP1Q96S55 665 aa10.93□□□□□ -0.66
HMGB1P39-201ENST00000366304 PLA2G12BQ9BX93 195 aa10.93□□□□□ -0.66
HMGB1P39-201ENST00000366304 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.93□□□□□ -0.66
HMGB1P39-201ENST00000366304 BIN2Q9UBW5 565 aaPredicted RBP10.93□□□□□ -0.66
HMGB1P39-201ENST00000366304 BOLA1Q9Y3E2 137 aa10.93□□□□□ -0.66
HMGB1P39-201ENST00000366304 A0A1B0GUL6 1792 aa10.93□□□□□ -0.66
HMGB1P39-201ENST00000366304 EYSQ5T1H1 3165 aa10.92□□□□□ -0.66
HMGB1P39-201ENST00000366304 MYH3P11055 1940 aa10.92□□□□□ -0.66
HMGB1P39-201ENST00000366304 BCRP11274 1271 aa10.92□□□□□ -0.66
HMGB1P39-201ENST00000366304 CRKP46108 304 aa10.92□□□□□ -0.66
HMGB1P39-201ENST00000366304 TNFAIP1Q13829 316 aa10.92□□□□□ -0.66
HMGB1P39-201ENST00000366304 MFSD14BQ5SR56 506 aa10.92□□□□□ -0.66
HMGB1P39-201ENST00000366304 GPAT2Q6NUI2 795 aa10.92□□□□□ -0.66
HMGB1P39-201ENST00000366304 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.92□□□□□ -0.66
HMGB1P39-201ENST00000366304 HS6ST3Q8IZP7 471 aa10.92□□□□□ -0.66
HMGB1P39-201ENST00000366304 PAWRQ96IZ0 340 aaKnown RBP10.92□□□□□ -0.66
HMGB1P39-201ENST00000366304 DEFB118Q96PH6 123 aa10.92□□□□□ -0.66
HMGB1P39-201ENST00000366304 MPHOSPH8Q99549 860 aa10.92□□□□□ -0.66
HMGB1P39-201ENST00000366304 MFRPQ9BY79 579 aa10.92□□□□□ -0.66
HMGB1P39-201ENST00000366304 CRISPLD2Q9H0B8 497 aa10.92□□□□□ -0.66
HMGB1P39-201ENST00000366304 SERPINA10Q9UK55 444 aa10.92□□□□□ -0.66
HMGB1P39-201ENST00000366304 TTF2Q9UNY4 1162 aaKnown RBP10.92□□□□□ -0.66
HMGB1P39-201ENST00000366304 TTC28Q96AY4 2481 aa10.92□□□□□ -0.66
HMGB1P39-201ENST00000366304 INHAP05111 366 aa10.91□□□□□ -0.66
HMGB1P39-201ENST00000366304 CYP2C8P10632 490 aa10.91□□□□□ -0.66
HMGB1P39-201ENST00000366304 SYN1P17600 705 aa10.91□□□□□ -0.66
HMGB1P39-201ENST00000366304 INPP5BP32019 993 aa10.91□□□□□ -0.66
HMGB1P39-201ENST00000366304 GCKRQ14397 625 aa10.91□□□□□ -0.66
HMGB1P39-201ENST00000366304 LRIT3Q3SXY7 679 aa10.91□□□□□ -0.66
HMGB1P39-201ENST00000366304 ZNF804AQ7Z570 1209 aa10.91□□□□□ -0.66
HMGB1P39-201ENST00000366304 ANKRD23Q86SG2 305 aa10.91□□□□□ -0.66
HMGB1P39-201ENST00000366304 C7orf61Q8IZ16 206 aa10.91□□□□□ -0.66
HMGB1P39-201ENST00000366304 FBXO22Q8NEZ5 403 aa10.91□□□□□ -0.66
HMGB1P39-201ENST00000366304 TDRD7Q8NHU6 1098 aaKnown RBP10.91□□□□□ -0.66
HMGB1P39-201ENST00000366304 RUNDC1Q96C34 613 aa10.91□□□□□ -0.66
HMGB1P39-201ENST00000366304 PAK6Q9NQU5 681 aaPredicted RBP10.91□□□□□ -0.66
HMGB1P39-201ENST00000366304 LAMA2P24043 3122 aaKnown RBP10.9□□□□□ -0.66
HMGB1P39-201ENST00000366304 ADCY3O60266 1144 aa10.9□□□□□ -0.66
HMGB1P39-201ENST00000366304 DDX58O95786 925 aaKnown RBP10.9□□□□□ -0.66
HMGB1P39-201ENST00000366304 TFRCP02786 760 aaKnown RBP10.9□□□□□ -0.66
HMGB1P39-201ENST00000366304 MAGEA10P43363 369 aaPredicted RBP10.9□□□□□ -0.66
HMGB1P39-201ENST00000366304 GYG1P46976 350 aa10.9□□□□□ -0.66
HMGB1P39-201ENST00000366304 UBXN2AP68543 259 aa10.9□□□□□ -0.66
HMGB1P39-201ENST00000366304 FOXO4P98177 505 aa10.9□□□□□ -0.66
HMGB1P39-201ENST00000366304 EPHA10Q5JZY3 1008 aa10.9□□□□□ -0.66
HMGB1P39-201ENST00000366304 MIGA2Q7L4E1 593 aa10.9□□□□□ -0.66
HMGB1P39-201ENST00000366304 ZNF594Q96JF6 807 aaPredicted RBP10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms