RNA–Protein interactions for RNA: ENST00000364313.1

RNVU1-3-201, Transcript of RNA, variant U1 small nuclear 3, humanhuman

BASIC

Gene RNVU1-3, Length 161 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNVU1-3-201ENST00000364313 HHIPQ96QV1 700 aa5.4□□□□□ -1.54
RNVU1-3-201ENST00000364313 SLC26A8Q96RN1 970 aa5.4□□□□□ -1.54
RNVU1-3-201ENST00000364313 MUC3BQ9H195 1237 aa5.4□□□□□ -1.54
RNVU1-3-201ENST00000364313 SOX13Q9UN79 622 aa5.4□□□□□ -1.54
RNVU1-3-201ENST00000364313 POLR3KQ9Y2Y1 108 aaPredicted RBP5.4□□□□□ -1.54
RNVU1-3-201ENST00000364313 RIPOR2Q9Y4F9 1068 aa5.4□□□□□ -1.54
RNVU1-3-201ENST00000364313 KDM2BQ8NHM5 1336 aa5.4□□□□□ -1.55
RNVU1-3-201ENST00000364313 CCDC194A0A1B0GVG4 234 aa5.39□□□□□ -1.55
RNVU1-3-201ENST00000364313 ZBTB42B2RXF5 422 aa5.39□□□□□ -1.55
RNVU1-3-201ENST00000364313 TRPA1O75762 1119 aa5.39□□□□□ -1.55
RNVU1-3-201ENST00000364313 GUCY2CP25092 1073 aa5.39□□□□□ -1.55
RNVU1-3-201ENST00000364313 SMCPP49901 116 aaPredicted RBP5.39□□□□□ -1.55
RNVU1-3-201ENST00000364313 EXOSC10Q01780 885 aaKnown RBP5.39□□□□□ -1.55
RNVU1-3-201ENST00000364313 ZNF423Q2M1K9 1284 aa5.39□□□□□ -1.55
RNVU1-3-201ENST00000364313 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.39□□□□□ -1.55
RNVU1-3-201ENST00000364313 SPATC1Q76KD6 591 aa5.39□□□□□ -1.55
RNVU1-3-201ENST00000364313 PDZD3Q86UT5 571 aa5.39□□□□□ -1.55
RNVU1-3-201ENST00000364313 CACTIN-AS1Q8N1I8 211 aa5.39□□□□□ -1.55
RNVU1-3-201ENST00000364313 JARID2Q92833 1246 aaPredicted RBP5.39□□□□□ -1.55
RNVU1-3-201ENST00000364313 NINJ1Q92982 152 aa5.39□□□□□ -1.55
RNVU1-3-201ENST00000364313 POP1Q99575 1024 aaKnown RBP5.39□□□□□ -1.55
RNVU1-3-201ENST00000364313 PCDHB14Q9Y5E9 798 aa5.39□□□□□ -1.55
RNVU1-3-201ENST00000364313 LOC102724159A0A0B4J2E5 919 aa5.38□□□□□ -1.55
RNVU1-3-201ENST00000364313 UPK3BL1B0FP48 263 aa5.38□□□□□ -1.55
RNVU1-3-201ENST00000364313 UPK3BL2E5RIL1 263 aa5.38□□□□□ -1.55
RNVU1-3-201ENST00000364313 TNFRSF10AO00220 468 aa5.38□□□□□ -1.55
RNVU1-3-201ENST00000364313 GFRA2O00451 464 aa5.38□□□□□ -1.55
RNVU1-3-201ENST00000364313 BNIP3LO60238 219 aa5.38□□□□□ -1.55
RNVU1-3-201ENST00000364313 DIAPH1O60610 1272 aaKnown RBP5.38□□□□□ -1.55
RNVU1-3-201ENST00000364313 HCLS1P14317 486 aaPredicted RBP5.38□□□□□ -1.55
RNVU1-3-201ENST00000364313 POU3F3P20264 500 aaPredicted RBP5.38□□□□□ -1.55
RNVU1-3-201ENST00000364313 PCDH1Q08174 1060 aa5.38□□□□□ -1.55
RNVU1-3-201ENST00000364313 SSRP1Q08945 709 aaKnown RBP5.38□□□□□ -1.55
RNVU1-3-201ENST00000364313 NEUROD1Q13562 356 aa5.38□□□□□ -1.55
RNVU1-3-201ENST00000364313 SEPT6Q14141 434 aa5.38□□□□□ -1.55
RNVU1-3-201ENST00000364313 NCAPHQ15003 741 aa5.38□□□□□ -1.55
RNVU1-3-201ENST00000364313 PWP2Q15269 919 aaKnown RBP5.38□□□□□ -1.55
RNVU1-3-201ENST00000364313 C6orf118Q5T5N4 469 aa5.38□□□□□ -1.55
RNVU1-3-201ENST00000364313 FBXW10Q5XX13 1052 aa5.38□□□□□ -1.55
RNVU1-3-201ENST00000364313 LARP1BQ659C4 914 aaKnown RBP5.38□□□□□ -1.55
RNVU1-3-201ENST00000364313 HGSNATQ68CP4 663 aa5.38□□□□□ -1.55
RNVU1-3-201ENST00000364313 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.38□□□□□ -1.55
RNVU1-3-201ENST00000364313 EEPD1Q7L9B9 569 aa5.38□□□□□ -1.55
RNVU1-3-201ENST00000364313 VN1R5Q7Z5H4 357 aa5.38□□□□□ -1.55
RNVU1-3-201ENST00000364313 TTC6Q86TZ1 520 aa5.38□□□□□ -1.55
RNVU1-3-201ENST00000364313 SULF2Q8IWU5 870 aa5.38□□□□□ -1.55
RNVU1-3-201ENST00000364313 ZBTB38Q8NAP3 1195 aaPredicted RBP5.38□□□□□ -1.55
RNVU1-3-201ENST00000364313 SGSM3Q96HU1 749 aa5.38□□□□□ -1.55
RNVU1-3-201ENST00000364313 SLC30A3Q99726 388 aa5.38□□□□□ -1.55
RNVU1-3-201ENST00000364313 IER2Q9BTL4 223 aa5.38□□□□□ -1.55
RNVU1-3-201ENST00000364313 RASSF4Q9H2L5 321 aa5.38□□□□□ -1.55
RNVU1-3-201ENST00000364313 SOX17Q9H6I2 414 aaPredicted RBP5.38□□□□□ -1.55
RNVU1-3-201ENST00000364313 ATXN7L1Q9ULK2 861 aaPredicted RBP5.38□□□□□ -1.55
RNVU1-3-201ENST00000364313 ATP8A1Q9Y2Q0 1164 aa5.38□□□□□ -1.55
RNVU1-3-201ENST00000364313 FIGNL2A6NMB9 653 aa5.37□□□□□ -1.55
RNVU1-3-201ENST00000364313 ADCY3O60266 1144 aa5.37□□□□□ -1.55
RNVU1-3-201ENST00000364313 SMNDC1O75940 238 aaKnown RBP eCLIP5.37□□□□□ -1.55
RNVU1-3-201ENST00000364313 DDAH1O94760 285 aa5.37□□□□□ -1.55
RNVU1-3-201ENST00000364313 ASMTLO95671 621 aa5.37□□□□□ -1.55
RNVU1-3-201ENST00000364313 STAT3P40763 770 aa5.37□□□□□ -1.55
RNVU1-3-201ENST00000364313 AP3B2Q13367 1082 aa5.37□□□□□ -1.55
RNVU1-3-201ENST00000364313 MRM1Q6IN84 353 aaKnown RBP5.37□□□□□ -1.55
RNVU1-3-201ENST00000364313 FERMT3Q86UX7 667 aa5.37□□□□□ -1.55
RNVU1-3-201ENST00000364313 THNSL2Q86YJ6 484 aa5.37□□□□□ -1.55
RNVU1-3-201ENST00000364313 PRPF38AQ8NAV1 312 aaKnown RBP5.37□□□□□ -1.55
RNVU1-3-201ENST00000364313 ZSCAN1Q8NBB4 408 aa5.37□□□□□ -1.55
RNVU1-3-201ENST00000364313 DDX54Q8TDD1 881 aaKnown RBP5.37□□□□□ -1.55
RNVU1-3-201ENST00000364313 STK35Q8TDR2 534 aa5.37□□□□□ -1.55
RNVU1-3-201ENST00000364313 ASAP3Q8TDY4 903 aa5.37□□□□□ -1.55
RNVU1-3-201ENST00000364313 TMEM40Q8WWA1 233 aa5.37□□□□□ -1.55
RNVU1-3-201ENST00000364313 TTC9Q92623 222 aa5.37□□□□□ -1.55
RNVU1-3-201ENST00000364313 MFSD3Q96ES6 412 aa5.37□□□□□ -1.55
RNVU1-3-201ENST00000364313 C8orf48Q96LL4 319 aa5.37□□□□□ -1.55
RNVU1-3-201ENST00000364313 NSUN5Q96P11 429 aaKnown RBP5.37□□□□□ -1.55
RNVU1-3-201ENST00000364313 TRERF1Q96PN7 1200 aa5.37□□□□□ -1.55
RNVU1-3-201ENST00000364313 GAS2L1Q99501 681 aaPredicted RBP5.37□□□□□ -1.55
RNVU1-3-201ENST00000364313 SPATA9Q9BWV2 254 aa5.37□□□□□ -1.55
RNVU1-3-201ENST00000364313 NUCKS1Q9H1E3 243 aaKnown RBP5.37□□□□□ -1.55
RNVU1-3-201ENST00000364313 RBSNQ9H1K0 784 aa5.37□□□□□ -1.55
RNVU1-3-201ENST00000364313 HOMER2Q9NSB8 354 aa5.37□□□□□ -1.55
RNVU1-3-201ENST00000364313 DNMT3LQ9UJW3 386 aa5.37□□□□□ -1.55
RNVU1-3-201ENST00000364313 SNCAIPQ9Y6H5 919 aa5.37□□□□□ -1.55
RNVU1-3-201ENST00000364313 A0A087X0B3 334 aa5.36□□□□□ -1.55
RNVU1-3-201ENST00000364313 DCDC2BA2VCK2 349 aa5.36□□□□□ -1.55
RNVU1-3-201ENST00000364313 SLC35F4A4IF30 521 aa5.36□□□□□ -1.55
RNVU1-3-201ENST00000364313 IQCA1LA6NCM1 817 aa5.36□□□□□ -1.55
RNVU1-3-201ENST00000364313 ALG1L2C9J202 215 aa5.36□□□□□ -1.55
RNVU1-3-201ENST00000364313 TNFRSF10CO14798 259 aa5.36□□□□□ -1.55
RNVU1-3-201ENST00000364313 ESRRAP11474 423 aaPredicted RBP5.36□□□□□ -1.55
RNVU1-3-201ENST00000364313 PTPN11Q06124 597 aaPredicted RBP5.36□□□□□ -1.55
RNVU1-3-201ENST00000364313 FNDC3BQ53EP0 1204 aaKnown RBP5.36□□□□□ -1.55
RNVU1-3-201ENST00000364313 CDCP2Q5VXM1 449 aa5.36□□□□□ -1.55
RNVU1-3-201ENST00000364313 C6orf15Q6UXA7 325 aaPredicted RBP5.36□□□□□ -1.55
RNVU1-3-201ENST00000364313 ADAMTSL4Q6UY14 1074 aa5.36□□□□□ -1.55
RNVU1-3-201ENST00000364313 TRIM46Q7Z4K8 759 aa5.36□□□□□ -1.55
RNVU1-3-201ENST00000364313 TRIM22Q8IYM9 498 aa5.36□□□□□ -1.55
RNVU1-3-201ENST00000364313 LRRC47Q8N1G4 583 aaKnown RBP5.36□□□□□ -1.55
RNVU1-3-201ENST00000364313 GRIN3AQ8TCU5 1115 aa5.36□□□□□ -1.55
RNVU1-3-201ENST00000364313 BHMTQ93088 406 aa5.36□□□□□ -1.55
RNVU1-3-201ENST00000364313 PHAXQ9H814 394 aaKnown RBP5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms