RNA–Protein interactions for RNA: ENST00000362093.4

CKLF-204, Transcript of chemokine like factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKLF, Length 412 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-204ENST00000362093 GRM1Q13255 1194 aa20.7■□□□□ 0.9
CKLF-204ENST00000362093 TTLL12Q14166 644 aaPredicted RBP20.7■□□□□ 0.9
CKLF-204ENST00000362093 MAP3K11Q16584 847 aa20.7■□□□□ 0.9
CKLF-204ENST00000362093 COL13A1Q5TAT6 717 aaPredicted RBP20.7■□□□□ 0.9
CKLF-204ENST00000362093 TMEM39BQ9GZU3 492 aa20.7■□□□□ 0.9
CKLF-204ENST00000362093 USP40Q9NVE5 1235 aa20.7■□□□□ 0.9
CKLF-204ENST00000362093 LRP2BPQ9P2M1 347 aa20.7■□□□□ 0.9
CKLF-204ENST00000362093 AKAP11Q9UKA4 1901 aa20.69■□□□□ 0.9
CKLF-204ENST00000362093 IFIT2P09913 472 aaKnown RBP20.69■□□□□ 0.9
CKLF-204ENST00000362093 PRKG1Q13976 671 aa20.69■□□□□ 0.9
CKLF-204ENST00000362093 LDLRAD1Q5T700 205 aa20.69■□□□□ 0.9
CKLF-204ENST00000362093 SSC5DA1L4H1 1573 aa20.68■□□□□ 0.9
CKLF-204ENST00000362093 GPR75-ASB3A0A0A6YYF3 556 aa20.68■□□□□ 0.9
CKLF-204ENST00000362093 IGSF3O75054 1194 aa20.68■□□□□ 0.9
CKLF-204ENST00000362093 USP2O75604 605 aaPredicted RBP20.68■□□□□ 0.9
CKLF-204ENST00000362093 HSPA1AP0DMV8 641 aaKnown RBP20.68■□□□□ 0.9
CKLF-204ENST00000362093 HSPA1BP0DMV9 641 aaKnown RBP20.68■□□□□ 0.9
CKLF-204ENST00000362093 GSTO1P78417 241 aa20.68■□□□□ 0.9
CKLF-204ENST00000362093 CDAN1Q8IWY9 1227 aa20.68■□□□□ 0.9
CKLF-204ENST00000362093 LRRCC1Q9C099 1032 aa20.68■□□□□ 0.9
CKLF-204ENST00000362093 WBP1LQ9NX94 342 aa20.68■□□□□ 0.9
CKLF-204ENST00000362093 RAI14Q9P0K7 980 aa20.68■□□□□ 0.9
CKLF-204ENST00000362093 ANGEL1Q9UNK9 670 aaKnown RBP20.68■□□□□ 0.9
CKLF-204ENST00000362093 FZD1Q9UP38 647 aa20.68■□□□□ 0.9
CKLF-204ENST00000362093 SUPT16HQ9Y5B9 1047 aaKnown RBP20.68■□□□□ 0.9
CKLF-204ENST00000362093 MROH7-TTC4A0A0A0MT08 1334 aa20.68■□□□□ 0.9
CKLF-204ENST00000362093 PPP1R12BO60237 982 aaPredicted RBP20.67■□□□□ 0.9
CKLF-204ENST00000362093 LDHCP07864 332 aa20.67■□□□□ 0.9
CKLF-204ENST00000362093 SLC10A3P09131 477 aa20.67■□□□□ 0.9
CKLF-204ENST00000362093 MAP2K1Q02750 393 aaPredicted RBP20.67■□□□□ 0.9
CKLF-204ENST00000362093 NOGQ13253 232 aa20.67■□□□□ 0.9
CKLF-204ENST00000362093 ZIC5Q96T25 663 aa20.67■□□□□ 0.9
CKLF-204ENST00000362093 PIH1D3Q9NQM4 214 aaKnown RBP20.67■□□□□ 0.9
CKLF-204ENST00000362093 MYH2Q9UKX2 1941 aa20.66■□□□□ 0.9
CKLF-204ENST00000362093 NFIAQ12857 509 aa20.66■□□□□ 0.9
CKLF-204ENST00000362093 RASAL3Q86YV0 1011 aa20.66■□□□□ 0.9
CKLF-204ENST00000362093 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.66■□□□□ 0.9
CKLF-204ENST00000362093 FAM151AQ8WW52 585 aa20.66■□□□□ 0.9
CKLF-204ENST00000362093 IDI2Q9BXS1 227 aa20.66■□□□□ 0.9
CKLF-204ENST00000362093 FAM198AQ9UFP1 575 aa20.66■□□□□ 0.9
CKLF-204ENST00000362093 SMARCA5O60264 1052 aaPredicted RBP20.65■□□□□ 0.9
CKLF-204ENST00000362093 BTDP43251 543 aa20.65■□□□□ 0.9
CKLF-204ENST00000362093 RHBDL3P58872 404 aa20.65■□□□□ 0.9
CKLF-204ENST00000362093 AAMPQ13685 434 aa20.65■□□□□ 0.9
CKLF-204ENST00000362093 NDUFB9Q9Y6M9 179 aa20.65■□□□□ 0.9
CKLF-204ENST00000362093 PCNTO95613 3336 aa20.65■□□□□ 0.9
CKLF-204ENST00000362093 THSD7BQ9C0I4 1608 aa20.64■□□□□ 0.9
CKLF-204ENST00000362093 UNCXA6NJT0 531 aa20.64■□□□□ 0.89
CKLF-204ENST00000362093 TCP10Q12799 353 aa20.64■□□□□ 0.89
CKLF-204ENST00000362093 NAA16Q6N069 864 aaPredicted RBP20.64■□□□□ 0.89
CKLF-204ENST00000362093 BCL11AQ9H165 835 aa20.64■□□□□ 0.89
CKLF-204ENST00000362093 ANTXR1Q9H6X2 564 aa20.64■□□□□ 0.89
CKLF-204ENST00000362093 MAP4K4O95819 1239 aaPredicted RBP20.63■□□□□ 0.89
CKLF-204ENST00000362093 IREB2P48200 963 aaKnown RBP20.63■□□□□ 0.89
CKLF-204ENST00000362093 RPAP1Q9BWH6 1393 aaPredicted RBP20.62■□□□□ 0.89
CKLF-204ENST00000362093 ENTPD3O75355 529 aa20.62■□□□□ 0.89
CKLF-204ENST00000362093 WDHD1O75717 1129 aaPredicted RBP20.62■□□□□ 0.89
CKLF-204ENST00000362093 ATP5JP18859 108 aa20.62■□□□□ 0.89
CKLF-204ENST00000362093 KIF23Q02241 960 aaPredicted RBP20.62■□□□□ 0.89
CKLF-204ENST00000362093 ZFPM1Q8IX07 1006 aa20.62■□□□□ 0.89
CKLF-204ENST00000362093 FOXN1O15353 648 aa20.61■□□□□ 0.89
CKLF-204ENST00000362093 NPM3O75607 178 aaKnown RBP20.61■□□□□ 0.89
CKLF-204ENST00000362093 RGS3P49796 1198 aa20.61■□□□□ 0.89
CKLF-204ENST00000362093 PPP4CP60510 307 aa20.61■□□□□ 0.89
CKLF-204ENST00000362093 EXOC6Q8TAG9 804 aa20.61■□□□□ 0.89
CKLF-204ENST00000362093 HOOK2Q96ED9 719 aa20.61■□□□□ 0.89
CKLF-204ENST00000362093 SLC10A4Q96EP9 437 aa20.61■□□□□ 0.89
CKLF-204ENST00000362093 DDX4Q9NQI0 724 aaKnown RBP20.61■□□□□ 0.89
CKLF-204ENST00000362093 RFX7Q2KHR2 1363 aa20.6■□□□□ 0.89
CKLF-204ENST00000362093 IDH1O75874 414 aaKnown RBP20.6■□□□□ 0.89
CKLF-204ENST00000362093 HDAC1Q13547 482 aaPredicted RBP20.6■□□□□ 0.89
CKLF-204ENST00000362093 TTF1Q15361 905 aaPredicted RBP20.6■□□□□ 0.89
CKLF-204ENST00000362093 ADGRA1Q86SQ6 560 aa20.6■□□□□ 0.89
CKLF-204ENST00000362093 ANKRD13AQ8IZ07 590 aa20.6■□□□□ 0.89
CKLF-204ENST00000362093 AIDAQ96BJ3 306 aa20.6■□□□□ 0.89
CKLF-204ENST00000362093 CLMNQ96JQ2 1002 aa20.6■□□□□ 0.89
CKLF-204ENST00000362093 CSRNP1Q96S65 589 aa20.6■□□□□ 0.89
CKLF-204ENST00000362093 BAG3O95817 575 aa20.59■□□□□ 0.89
CKLF-204ENST00000362093 MAP3K9P80192 1104 aa20.59■□□□□ 0.89
CKLF-204ENST00000362093 MAP3K12Q12852 859 aa20.59■□□□□ 0.89
CKLF-204ENST00000362093 TMED8Q6PL24 325 aaPredicted RBP20.59■□□□□ 0.89
CKLF-204ENST00000362093 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.59■□□□□ 0.89
CKLF-204ENST00000362093 REM2Q8IYK8 340 aaPredicted RBP20.59■□□□□ 0.89
CKLF-204ENST00000362093 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.59■□□□□ 0.89
CKLF-204ENST00000362093 HAUS7Q99871 368 aa20.59■□□□□ 0.89
CKLF-204ENST00000362093 BOLA2Q9H3K6 86 aa20.59■□□□□ 0.89
CKLF-204ENST00000362093 MYO5AQ9Y4I1 1855 aaKnown RBP20.58■□□□□ 0.89
CKLF-204ENST00000362093 CYP7A1P22680 504 aa20.58■□□□□ 0.89
CKLF-204ENST00000362093 SPRYD7Q5W111 196 aa20.58■□□□□ 0.89
CKLF-204ENST00000362093 DCAF15Q66K64 600 aa20.58■□□□□ 0.89
CKLF-204ENST00000362093 MIGA2Q7L4E1 593 aa20.58■□□□□ 0.89
CKLF-204ENST00000362093 SH3BP5LQ7L8J4 393 aa20.58■□□□□ 0.89
CKLF-204ENST00000362093 MAGEB6Q8N7X4 407 aa20.58■□□□□ 0.89
CKLF-204ENST00000362093 AATFQ9NY61 560 aaKnown RBP eCLIP20.58■□□□□ 0.89
CKLF-204ENST00000362093 DDTLA6NHG4 134 aaPredicted RBP20.57■□□□□ 0.88
CKLF-204ENST00000362093 SH3RF3Q8TEJ3 882 aaPredicted RBP20.57■□□□□ 0.88
CKLF-204ENST00000362093 EDC3Q96F86 508 aaKnown RBP20.57■□□□□ 0.88
CKLF-204ENST00000362093 DNAJC2Q99543 621 aaKnown RBP20.57■□□□□ 0.88
CKLF-204ENST00000362093 NOL10Q9BSC4 688 aaKnown RBP20.57■□□□□ 0.88
CKLF-204ENST00000362093 BEGAINQ9BUH8 593 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms