RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 ANKRD62A6NC57 917 aa8.85□□□□□ -0.99
CLCN3-202ENST00000360642 INHAP05111 366 aa8.85□□□□□ -0.99
CLCN3-202ENST00000360642 ZNF76P36508 570 aa8.85□□□□□ -0.99
CLCN3-202ENST00000360642 PBX2P40425 430 aa8.85□□□□□ -0.99
CLCN3-202ENST00000360642 MRE11P49959 708 aa8.85□□□□□ -0.99
CLCN3-202ENST00000360642 BAG4O95429 457 aaKnown RBP8.84□□□□□ -0.99
CLCN3-202ENST00000360642 CHMLP26374 656 aa8.84□□□□□ -0.99
CLCN3-202ENST00000360642 PLCB3Q01970 1234 aa8.84□□□□□ -0.99
CLCN3-202ENST00000360642 BEND3Q5T5X7 828 aa8.84□□□□□ -0.99
CLCN3-202ENST00000360642 MAMSTRQ6ZN01 415 aa8.84□□□□□ -0.99
CLCN3-202ENST00000360642 ARHGEF25Q86VW2 580 aa8.84□□□□□ -0.99
CLCN3-202ENST00000360642 KCNQ3O43525 872 aa8.84□□□□□ -0.99
CLCN3-202ENST00000360642 RAB11FIP3O75154 756 aa8.84□□□□□ -0.99
CLCN3-202ENST00000360642 HMGB1P09429 215 aaKnown RBP8.84□□□□□ -0.99
CLCN3-202ENST00000360642 NUCB2P80303 420 aa8.84□□□□□ -0.99
CLCN3-202ENST00000360642 EDEM1Q92611 657 aa8.84□□□□□ -0.99
CLCN3-202ENST00000360642 C2orf49Q9BVC5 232 aaPredicted RBP8.84□□□□□ -0.99
CLCN3-202ENST00000360642 OVOS2A0A0G2JMS6 1433 aa8.84□□□□□ -0.99
CLCN3-202ENST00000360642 NR3C2P08235 984 aa8.84□□□□□ -0.99
CLCN3-202ENST00000360642 TRIM32Q13049 653 aa8.84□□□□□ -0.99
CLCN3-202ENST00000360642 BMS1Q14692 1282 aaKnown RBP8.84□□□□□ -0.99
CLCN3-202ENST00000360642 AMOTQ4VCS5 1084 aa8.84□□□□□ -0.99
CLCN3-202ENST00000360642 LRRC59Q96AG4 307 aaKnown RBP8.84□□□□□ -0.99
CLCN3-202ENST00000360642 CHPF2Q9P2E5 772 aa8.84□□□□□ -0.99
CLCN3-202ENST00000360642 CAMTA1Q9Y6Y1 1673 aa8.84□□□□□ -1
CLCN3-202ENST00000360642 HEG1Q9ULI3 1381 aa8.83□□□□□ -1
CLCN3-202ENST00000360642 CCDC85CA6NKD9 419 aa8.83□□□□□ -1
CLCN3-202ENST00000360642 GCP02774 474 aa8.83□□□□□ -1
CLCN3-202ENST00000360642 PLEKHO1Q53GL0 409 aaPredicted RBP8.83□□□□□ -1
CLCN3-202ENST00000360642 RNF20Q5VTR2 975 aa8.83□□□□□ -1
CLCN3-202ENST00000360642 THSD4Q6ZMP0 1018 aa8.83□□□□□ -1
CLCN3-202ENST00000360642 PPP1R42Q7Z4L9 355 aa8.83□□□□□ -1
CLCN3-202ENST00000360642 PANK2Q9BZ23 570 aa8.83□□□□□ -1
CLCN3-202ENST00000360642 GRPEL1Q9HAV7 217 aa8.83□□□□□ -1
CLCN3-202ENST00000360642 ADAMTSL3P82987 1691 aa8.83□□□□□ -1
CLCN3-202ENST00000360642 BTBD11A6QL63 1104 aa8.83□□□□□ -1
CLCN3-202ENST00000360642 EPB41L2O43491 1005 aaKnown RBP8.83□□□□□ -1
CLCN3-202ENST00000360642 NBPF7P0C2Y1 421 aaPredicted RBP8.83□□□□□ -1
CLCN3-202ENST00000360642 EIF2S2P20042 333 aaKnown RBP8.83□□□□□ -1
CLCN3-202ENST00000360642 IGFBP4P22692 258 aa8.83□□□□□ -1
CLCN3-202ENST00000360642 ANAPC15P60006 121 aa8.83□□□□□ -1
CLCN3-202ENST00000360642 UNC5CLQ8IV45 518 aa8.83□□□□□ -1
CLCN3-202ENST00000360642 ZSWIM4Q9H7M6 989 aa8.83□□□□□ -1
CLCN3-202ENST00000360642 LMTK3Q96Q04 1460 aa8.83□□□□□ -1
CLCN3-202ENST00000360642 PRPF40AO75400 957 aaKnown RBP8.82□□□□□ -1
CLCN3-202ENST00000360642 DNAAF4Q8WXU2 420 aa8.82□□□□□ -1
CLCN3-202ENST00000360642 RNF34Q969K3 372 aa8.82□□□□□ -1
CLCN3-202ENST00000360642 ORAI2Q96SN7 254 aa8.82□□□□□ -1
CLCN3-202ENST00000360642 SCHIP1Q9P0W5 487 aaPredicted RBP8.82□□□□□ -1
CLCN3-202ENST00000360642 ADCY9O60503 1353 aa8.82□□□□□ -1
CLCN3-202ENST00000360642 PXDNQ92626 1479 aa8.82□□□□□ -1
CLCN3-202ENST00000360642 NPHP4O75161 1426 aaPredicted RBP8.82□□□□□ -1
CLCN3-202ENST00000360642 TRPM3Q9HCF6 1732 aaPredicted RBP8.82□□□□□ -1
CLCN3-202ENST00000360642 SETD1BQ9UPS6 1966 aaKnown RBP8.82□□□□□ -1
CLCN3-202ENST00000360642 PI4KAP2A4QPH2 592 aa8.82□□□□□ -1
CLCN3-202ENST00000360642 RNMTO43148 476 aaKnown RBP8.82□□□□□ -1
CLCN3-202ENST00000360642 ERVK-9P63128 1117 aa8.82□□□□□ -1
CLCN3-202ENST00000360642 PKP1Q13835 747 aa8.82□□□□□ -1
CLCN3-202ENST00000360642 KLHL40Q2TBA0 621 aa8.82□□□□□ -1
CLCN3-202ENST00000360642 PPP1R18Q6NYC8 613 aa8.82□□□□□ -1
CLCN3-202ENST00000360642 ZNF530Q6P9A1 599 aaPredicted RBP8.82□□□□□ -1
CLCN3-202ENST00000360642 GAS2L3Q86XJ1 694 aa8.82□□□□□ -1
CLCN3-202ENST00000360642 ZGPATQ8N5A5 531 aaKnown RBP8.82□□□□□ -1
CLCN3-202ENST00000360642 PI4KAP1Q8N8J0 262 aa8.82□□□□□ -1
CLCN3-202ENST00000360642 MST1RQ04912 1400 aa8.82□□□□□ -1
CLCN3-202ENST00000360642 AK9Q5TCS8 1911 aa8.82□□□□□ -1
CLCN3-202ENST00000360642 CBLBQ13191 982 aa8.82□□□□□ -1
CLCN3-202ENST00000360642 TJAP1Q5JTD0 557 aa8.82□□□□□ -1
CLCN3-202ENST00000360642 MPRIPQ6WCQ1 1025 aa8.82□□□□□ -1
CLCN3-202ENST00000360642 PI4K2BQ8TCG2 481 aa8.82□□□□□ -1
CLCN3-202ENST00000360642 RHPN1Q8TCX5 695 aa8.82□□□□□ -1
CLCN3-202ENST00000360642 ZDHHC9Q9Y397 364 aa8.82□□□□□ -1
CLCN3-202ENST00000360642 ADAMTS7Q9UKP4 1686 aa8.81□□□□□ -1
CLCN3-202ENST00000360642 GOLGA6L22H0YM25 854 aa8.81□□□□□ -1
CLCN3-202ENST00000360642 MZF1P28698 734 aaPredicted RBP8.81□□□□□ -1
CLCN3-202ENST00000360642 TEFQ10587 303 aa8.81□□□□□ -1
CLCN3-202ENST00000360642 TMC4Q7Z404 712 aa8.81□□□□□ -1
CLCN3-202ENST00000360642 RILPL2Q969X0 211 aa8.81□□□□□ -1
CLCN3-202ENST00000360642 C1QTNF2Q9BXJ5 285 aa8.81□□□□□ -1
CLCN3-202ENST00000360642 IL1RAPL2Q9NP60 686 aa8.81□□□□□ -1
CLCN3-202ENST00000360642 COPRSQ9NQ92 184 aa8.81□□□□□ -1
CLCN3-202ENST00000360642 PALD1Q9ULE6 856 aa8.81□□□□□ -1
CLCN3-202ENST00000360642 SIPA1L3O60292 1781 aaPredicted RBP8.81□□□□□ -1
CLCN3-202ENST00000360642 TK2O00142 265 aa8.81□□□□□ -1
CLCN3-202ENST00000360642 SURF6O75683 361 aaKnown RBP8.81□□□□□ -1
CLCN3-202ENST00000360642 GRM5P41594 1212 aa8.81□□□□□ -1
CLCN3-202ENST00000360642 MCM2P49736 904 aa8.81□□□□□ -1
CLCN3-202ENST00000360642 DAB2P98082 770 aa8.81□□□□□ -1
CLCN3-202ENST00000360642 MTX1Q13505 466 aa8.81□□□□□ -1
CLCN3-202ENST00000360642 EPS8L3Q8TE67 593 aaKnown RBP8.81□□□□□ -1
CLCN3-202ENST00000360642 KIF1BPQ96EK5 621 aa8.81□□□□□ -1
CLCN3-202ENST00000360642 SRGAP3O43295 1099 aa8.8□□□□□ -1
CLCN3-202ENST00000360642 NEK4P51957 841 aa8.8□□□□□ -1
CLCN3-202ENST00000360642 CUL4AQ13619 759 aa8.8□□□□□ -1
CLCN3-202ENST00000360642 SF3A1Q15459 793 aaKnown RBP8.8□□□□□ -1
CLCN3-202ENST00000360642 NLGN1Q8N2Q7 840 aa8.8□□□□□ -1
CLCN3-202ENST00000360642 ANKRD24Q8TF21 1146 aa8.8□□□□□ -1
CLCN3-202ENST00000360642 CNKSR1Q969H4 720 aa8.8□□□□□ -1
CLCN3-202ENST00000360642 IL25Q9H293 177 aa8.8□□□□□ -1
CLCN3-202ENST00000360642 LMBRD1Q9NUN5 540 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms