RNA–Protein interactions for RNA: ENST00000358207.9

SMARCAL1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SMARCAL1, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-202ENST00000358207 PRDM16Q9HAZ2 1276 aa10.78□□□□□ -0.68
SMARCAL1-202ENST00000358207 ARGLU1Q9NWB6 273 aaPredicted RBP10.78□□□□□ -0.68
SMARCAL1-202ENST00000358207 MRVI1Q9Y6F6 885 aa10.78□□□□□ -0.68
SMARCAL1-202ENST00000358207 ELP1O95163 1332 aa10.77□□□□□ -0.68
SMARCAL1-202ENST00000358207 GNPATO15228 680 aa10.77□□□□□ -0.68
SMARCAL1-202ENST00000358207 LIG1P18858 919 aa10.77□□□□□ -0.68
SMARCAL1-202ENST00000358207 UBE2HP62256 183 aa10.77□□□□□ -0.68
SMARCAL1-202ENST00000358207 GPR162Q16538 588 aa10.77□□□□□ -0.68
SMARCAL1-202ENST00000358207 JPH2Q9BR39 696 aaPredicted RBP10.77□□□□□ -0.68
SMARCAL1-202ENST00000358207 FUT8Q9BYC5 575 aa10.77□□□□□ -0.68
SMARCAL1-202ENST00000358207 GNL3LQ9NVN8 582 aaKnown RBP10.77□□□□□ -0.68
SMARCAL1-202ENST00000358207 CLIP2Q9UDT6 1046 aa10.77□□□□□ -0.68
SMARCAL1-202ENST00000358207 NARFQ9UHQ1 456 aa10.77□□□□□ -0.68
SMARCAL1-202ENST00000358207 ABCC4O15439 1325 aa10.77□□□□□ -0.69
SMARCAL1-202ENST00000358207 POLRMTO00411 1230 aaKnown RBP10.77□□□□□ -0.69
SMARCAL1-202ENST00000358207 SKILP12757 684 aa10.77□□□□□ -0.69
SMARCAL1-202ENST00000358207 CCT2P78371 535 aaKnown RBP10.77□□□□□ -0.69
SMARCAL1-202ENST00000358207 OTUD7AQ8TE49 926 aaPredicted RBP10.77□□□□□ -0.69
SMARCAL1-202ENST00000358207 LAMB1P07942 1786 aa10.77□□□□□ -0.69
SMARCAL1-202ENST00000358207 ATP5J2-PTCD1G3V325 749 aa10.76□□□□□ -0.69
SMARCAL1-202ENST00000358207 A1BGP04217 495 aa10.76□□□□□ -0.69
SMARCAL1-202ENST00000358207 ELF1P32519 619 aa10.76□□□□□ -0.69
SMARCAL1-202ENST00000358207 CRKLP46109 303 aaKnown RBP10.76□□□□□ -0.69
SMARCAL1-202ENST00000358207 CCZ1BP86790 482 aa10.76□□□□□ -0.69
SMARCAL1-202ENST00000358207 CCZ1P86791 482 aaPredicted RBP10.76□□□□□ -0.69
SMARCAL1-202ENST00000358207 CBX8Q9HC52 389 aa10.76□□□□□ -0.69
SMARCAL1-202ENST00000358207 EME2A4GXA9 379 aaPredicted RBP10.76□□□□□ -0.69
SMARCAL1-202ENST00000358207 CCNHP51946 323 aaPredicted RBP10.76□□□□□ -0.69
SMARCAL1-202ENST00000358207 UBXN4Q92575 508 aa10.76□□□□□ -0.69
SMARCAL1-202ENST00000358207 KCNB2Q92953 911 aa10.76□□□□□ -0.69
SMARCAL1-202ENST00000358207 IRAK4Q9NWZ3 460 aa10.76□□□□□ -0.69
SMARCAL1-202ENST00000358207 PSME4Q14997 1843 aa10.76□□□□□ -0.69
SMARCAL1-202ENST00000358207 NBPF7P0C2Y1 421 aaPredicted RBP10.76□□□□□ -0.69
SMARCAL1-202ENST00000358207 CCDC192P0DO97 292 aa10.76□□□□□ -0.69
SMARCAL1-202ENST00000358207 GORABQ5T7V8 394 aa10.76□□□□□ -0.69
SMARCAL1-202ENST00000358207 NOL8Q76FK4 1167 aaKnown RBP10.76□□□□□ -0.69
SMARCAL1-202ENST00000358207 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.76□□□□□ -0.69
SMARCAL1-202ENST00000358207 THOC1Q96FV9 657 aaKnown RBP10.76□□□□□ -0.69
SMARCAL1-202ENST00000358207 MAP3K2Q9Y2U5 619 aa10.76□□□□□ -0.69
SMARCAL1-202ENST00000358207 NEK4P51957 841 aa10.75□□□□□ -0.69
SMARCAL1-202ENST00000358207 IRX1P78414 480 aaPredicted RBP10.75□□□□□ -0.69
SMARCAL1-202ENST00000358207 ZRSR1Q15695 479 aaKnown RBP10.75□□□□□ -0.69
SMARCAL1-202ENST00000358207 SMIM5Q71RC9 77 aa10.75□□□□□ -0.69
SMARCAL1-202ENST00000358207 NBPF3Q9H094 633 aa10.75□□□□□ -0.69
SMARCAL1-202ENST00000358207 VPS18Q9P253 973 aa10.75□□□□□ -0.69
SMARCAL1-202ENST00000358207 AKAP2Q9Y2D5 859 aa10.75□□□□□ -0.69
SMARCAL1-202ENST00000358207 LTBP1Q14766 1721 aa10.75□□□□□ -0.69
SMARCAL1-202ENST00000358207 LIG3P49916 1009 aa10.75□□□□□ -0.69
SMARCAL1-202ENST00000358207 SCRN1Q12765 414 aa10.75□□□□□ -0.69
SMARCAL1-202ENST00000358207 ETAA1Q9NY74 926 aa10.75□□□□□ -0.69
SMARCAL1-202ENST00000358207 PNMA6EA0A0J9YXQ4 647 aa10.74□□□□□ -0.69
SMARCAL1-202ENST00000358207 SGSM2O43147 1006 aa10.74□□□□□ -0.69
SMARCAL1-202ENST00000358207 TADA3O75528 432 aa10.74□□□□□ -0.69
SMARCAL1-202ENST00000358207 ERLIN2O94905 339 aa10.74□□□□□ -0.69
SMARCAL1-202ENST00000358207 MMP10P09238 476 aa10.74□□□□□ -0.69
SMARCAL1-202ENST00000358207 EIF5P55010 431 aaKnown RBP10.74□□□□□ -0.69
SMARCAL1-202ENST00000358207 JAKMIP3Q5VZ66 844 aa10.74□□□□□ -0.69
SMARCAL1-202ENST00000358207 DNAJC14Q6Y2X3 702 aaPredicted RBP10.74□□□□□ -0.69
SMARCAL1-202ENST00000358207 GBP6Q6ZN66 633 aa10.74□□□□□ -0.69
SMARCAL1-202ENST00000358207 COPS6Q7L5N1 327 aa10.74□□□□□ -0.69
SMARCAL1-202ENST00000358207 GIMAP7Q8NHV1 300 aa10.74□□□□□ -0.69
SMARCAL1-202ENST00000358207 RBM46Q8TBY0 533 aaKnown RBP10.74□□□□□ -0.69
SMARCAL1-202ENST00000358207 ZNF483Q8TF39 744 aaPredicted RBP10.74□□□□□ -0.69
SMARCAL1-202ENST00000358207 XAGE3Q8WTP9 111 aa10.74□□□□□ -0.69
SMARCAL1-202ENST00000358207 STAG1Q8WVM7 1258 aa10.74□□□□□ -0.69
SMARCAL1-202ENST00000358207 MKRN1Q9UHC7 482 aaKnown RBP10.74□□□□□ -0.69
SMARCAL1-202ENST00000358207 KLRG2A4D1S0 409 aaPredicted RBP10.74□□□□□ -0.69
SMARCAL1-202ENST00000358207 ADCY2Q08462 1091 aa10.74□□□□□ -0.69
SMARCAL1-202ENST00000358207 C1QTNF12Q5T7M4 302 aa10.74□□□□□ -0.69
SMARCAL1-202ENST00000358207 MCM8Q9UJA3 840 aa10.74□□□□□ -0.69
SMARCAL1-202ENST00000358207 CTAGE5O15320 804 aa10.73□□□□□ -0.69
SMARCAL1-202ENST00000358207 FIBPO43427 364 aa10.73□□□□□ -0.69
SMARCAL1-202ENST00000358207 SETQ01105 290 aaPredicted RBP10.73□□□□□ -0.69
SMARCAL1-202ENST00000358207 TYRO3Q06418 890 aa10.73□□□□□ -0.69
SMARCAL1-202ENST00000358207 DDR1Q08345 913 aa10.73□□□□□ -0.69
SMARCAL1-202ENST00000358207 GRIK3Q13003 919 aa10.73□□□□□ -0.69
SMARCAL1-202ENST00000358207 RIC3Q7Z5B4 369 aa10.73□□□□□ -0.69
SMARCAL1-202ENST00000358207 ARHGAP45Q92619 1136 aa10.73□□□□□ -0.69
SMARCAL1-202ENST00000358207 ZBTB3Q9H5J0 574 aa10.73□□□□□ -0.69
SMARCAL1-202ENST00000358207 BABAM1Q9NWV8 329 aa10.73□□□□□ -0.69
SMARCAL1-202ENST00000358207 N4BP1O75113 896 aaKnown RBP10.73□□□□□ -0.69
SMARCAL1-202ENST00000358207 GPTP24298 496 aa10.73□□□□□ -0.69
SMARCAL1-202ENST00000358207 FSTL1Q12841 308 aa10.73□□□□□ -0.69
SMARCAL1-202ENST00000358207 CTCFLQ8NI51 663 aaPredicted RBP10.73□□□□□ -0.69
SMARCAL1-202ENST00000358207 FAM210AQ96ND0 272 aa10.73□□□□□ -0.69
SMARCAL1-202ENST00000358207 PARP3Q9Y6F1 533 aa10.73□□□□□ -0.69
SMARCAL1-202ENST00000358207 DUOX1Q9NRD9 1551 aa10.73□□□□□ -0.69
SMARCAL1-202ENST00000358207 FANCGO15287 622 aa10.73□□□□□ -0.69
SMARCAL1-202ENST00000358207 IPO7O95373 1038 aaKnown RBP10.73□□□□□ -0.69
SMARCAL1-202ENST00000358207 MYBL2P10244 700 aa10.73□□□□□ -0.69
SMARCAL1-202ENST00000358207 IL6STP40189 918 aaPredicted RBP10.73□□□□□ -0.69
SMARCAL1-202ENST00000358207 SNW1Q13573 536 aaKnown RBP10.73□□□□□ -0.69
SMARCAL1-202ENST00000358207 ANO6Q4KMQ2 910 aa10.73□□□□□ -0.69
SMARCAL1-202ENST00000358207 ARMC3Q5W041 872 aa10.73□□□□□ -0.69
SMARCAL1-202ENST00000358207 TEX11Q8IYF3 940 aa10.73□□□□□ -0.69
SMARCAL1-202ENST00000358207 PIK3R5Q8WYR1 880 aa10.73□□□□□ -0.69
SMARCAL1-202ENST00000358207 N4BP2L2Q92802 583 aaPredicted RBP10.73□□□□□ -0.69
SMARCAL1-202ENST00000358207 CCDC85AQ96PX6 553 aaPredicted RBP10.73□□□□□ -0.69
SMARCAL1-202ENST00000358207 IL1RAPL2Q9NP60 686 aa10.73□□□□□ -0.69
SMARCAL1-202ENST00000358207 SLX4Q8IY92 1834 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms