RNA–Protein interactions for RNA: ENST00000358170.6

CD46-205, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,371 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-205ENST00000358170 CAMTA1Q9Y6Y1 1673 aa9.57□□□□□ -0.88
CD46-205ENST00000358170 GUCY1A2P33402 732 aa9.57□□□□□ -0.88
CD46-205ENST00000358170 MAP3K12Q12852 859 aa9.57□□□□□ -0.88
CD46-205ENST00000358170 RASGRF1Q13972 1273 aa9.57□□□□□ -0.88
CD46-205ENST00000358170 ZNF827Q17R98 1081 aa9.57□□□□□ -0.88
CD46-205ENST00000358170 CFAP100Q494V2 611 aa9.57□□□□□ -0.88
CD46-205ENST00000358170 RBM43Q6ZSC3 357 aaKnown RBP9.57□□□□□ -0.88
CD46-205ENST00000358170 SPATA5Q8NB90 893 aa9.57□□□□□ -0.88
CD46-205ENST00000358170 NBPF3Q9H094 633 aa9.57□□□□□ -0.88
CD46-205ENST00000358170 BAZ2BQ9UIF8 2168 aaKnown RBP9.57□□□□□ -0.88
CD46-205ENST00000358170 FOXN1O15353 648 aa9.57□□□□□ -0.88
CD46-205ENST00000358170 ATP6V1AP38606 617 aa9.57□□□□□ -0.88
CD46-205ENST00000358170 AGXT2Q9BYV1 514 aa9.57□□□□□ -0.88
CD46-205ENST00000358170 NIP7Q9Y221 180 aaKnown RBP eCLIP9.57□□□□□ -0.88
CD46-205ENST00000358170 CYP2D7A0A087X1C5 515 aa9.56□□□□□ -0.88
CD46-205ENST00000358170 PDE8AO60658 829 aa9.56□□□□□ -0.88
CD46-205ENST00000358170 CSF1RP07333 972 aa9.56□□□□□ -0.88
CD46-205ENST00000358170 SUSD4Q5VX71 490 aa9.56□□□□□ -0.88
CD46-205ENST00000358170 MFSD6Q6ZSS7 791 aa9.56□□□□□ -0.88
CD46-205ENST00000358170 IFNL3Q8IZI9 196 aa9.56□□□□□ -0.88
CD46-205ENST00000358170 TEX13AQ9BXU3 409 aaPredicted RBP9.56□□□□□ -0.88
CD46-205ENST00000358170 CYP19A1P11511 503 aaPredicted RBP9.56□□□□□ -0.88
CD46-205ENST00000358170 CDK11BP21127 795 aaKnown RBP9.56□□□□□ -0.88
CD46-205ENST00000358170 GRAMD1CQ8IYS0 662 aa9.56□□□□□ -0.88
CD46-205ENST00000358170 CNNM3Q8NE01 707 aa9.56□□□□□ -0.88
CD46-205ENST00000358170 AFDNP55196 1824 aaKnown RBP9.56□□□□□ -0.88
CD46-205ENST00000358170 ERICH2A1L162 156 aa9.55□□□□□ -0.88
CD46-205ENST00000358170 RANBP6O60518 1105 aaKnown RBP9.55□□□□□ -0.88
CD46-205ENST00000358170 SLC5A1P13866 664 aa9.55□□□□□ -0.88
CD46-205ENST00000358170 GYG1P46976 350 aa9.55□□□□□ -0.88
CD46-205ENST00000358170 TPM4P67936 248 aa9.55□□□□□ -0.88
CD46-205ENST00000358170 SSRP1Q08945 709 aaKnown RBP9.55□□□□□ -0.88
CD46-205ENST00000358170 NR5A1Q13285 461 aa9.55□□□□□ -0.88
CD46-205ENST00000358170 KLHL10Q6JEL2 608 aa9.55□□□□□ -0.88
CD46-205ENST00000358170 LCORLQ8N3X6 602 aa9.55□□□□□ -0.88
CD46-205ENST00000358170 STRBPQ96SI9 672 aaKnown RBP9.55□□□□□ -0.88
CD46-205ENST00000358170 ZHX1Q9UKY1 873 aaPredicted RBP9.55□□□□□ -0.88
CD46-205ENST00000358170 SALL1Q9NSC2 1324 aa9.55□□□□□ -0.88
CD46-205ENST00000358170 CYP7A1P22680 504 aa9.55□□□□□ -0.88
CD46-205ENST00000358170 SFPQP23246 707 aaKnown RBP eCLIP9.55□□□□□ -0.88
CD46-205ENST00000358170 TTF1Q15361 905 aaPredicted RBP9.55□□□□□ -0.88
CD46-205ENST00000358170 PUM3Q15397 648 aaKnown RBP9.55□□□□□ -0.88
CD46-205ENST00000358170 SAFBQ15424 915 aaKnown RBP eCLIP9.55□□□□□ -0.886e-6■□□□□ 10.7
CD46-205ENST00000358170 TRMT44Q8IYL2 757 aaKnown RBP9.55□□□□□ -0.88
CD46-205ENST00000358170 MROH7-TTC4A0A0A0MT08 1334 aa9.55□□□□□ -0.88
CD46-205ENST00000358170 UBN2Q6ZU65 1347 aa9.55□□□□□ -0.88
CD46-205ENST00000358170 SH2B2O14492 632 aaPredicted RBP9.55□□□□□ -0.88
CD46-205ENST00000358170 COBLO75128 1261 aa9.55□□□□□ -0.88
CD46-205ENST00000358170 GRIN1Q05586 938 aa9.55□□□□□ -0.88
CD46-205ENST00000358170 NKX1-1Q15270 411 aaPredicted RBP9.55□□□□□ -0.88
CD46-205ENST00000358170 LPIN2Q92539 896 aa9.55□□□□□ -0.88
CD46-205ENST00000358170 CDKL5O76039 1030 aa9.54□□□□□ -0.88
CD46-205ENST00000358170 IGHMBP2P38935 993 aaKnown RBP9.54□□□□□ -0.88
CD46-205ENST00000358170 LONRF3Q496Y0 759 aa9.54□□□□□ -0.88
CD46-205ENST00000358170 BRAPQ7Z569 592 aa9.54□□□□□ -0.88
CD46-205ENST00000358170 STAMQ92783 540 aa9.54□□□□□ -0.88
CD46-205ENST00000358170 UBAC1Q9BSL1 405 aa9.54□□□□□ -0.88
CD46-205ENST00000358170 EPB41L4AQ9HCS5 686 aaPredicted RBP9.54□□□□□ -0.88
CD46-205ENST00000358170 RFX7Q2KHR2 1363 aa9.54□□□□□ -0.88
CD46-205ENST00000358170 UBASH3AP57075 661 aa9.54□□□□□ -0.88
CD46-205ENST00000358170 AKAP17AQ02040 695 aaKnown RBP9.54□□□□□ -0.88
CD46-205ENST00000358170 WTAPQ15007 396 aa9.54□□□□□ -0.88
CD46-205ENST00000358170 SHC4Q6S5L8 630 aa9.54□□□□□ -0.88
CD46-205ENST00000358170 SYT10Q6XYQ8 523 aa9.54□□□□□ -0.88
CD46-205ENST00000358170 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.54□□□□□ -0.88
CD46-205ENST00000358170 DIS3L2Q8IYB7 885 aaKnown RBP9.54□□□□□ -0.88
CD46-205ENST00000358170 CCDC94Q9BW85 323 aaPredicted RBP9.54□□□□□ -0.88
CD46-205ENST00000358170 CABP5Q9NP86 173 aa9.54□□□□□ -0.88
CD46-205ENST00000358170 POLR3EQ9NVU0 708 aa9.54□□□□□ -0.88
CD46-205ENST00000358170 ZNF215Q9UL58 517 aaPredicted RBP9.54□□□□□ -0.88
CD46-205ENST00000358170 YEATS4O95619 227 aa9.54□□□□□ -0.88
CD46-205ENST00000358170 CAVIN2O95810 425 aa9.54□□□□□ -0.88
CD46-205ENST00000358170 CASP1P29466 404 aa9.54□□□□□ -0.88
CD46-205ENST00000358170 AFMP43652 599 aa9.54□□□□□ -0.88
CD46-205ENST00000358170 TRIM28Q13263 835 aaKnown RBP9.54□□□□□ -0.88
CD46-205ENST00000358170 SLC39A14Q15043 492 aa9.54□□□□□ -0.88
CD46-205ENST00000358170 AXDND1Q5T1B0 1012 aaPredicted RBP9.54□□□□□ -0.88
CD46-205ENST00000358170 OLFM4Q6UX06 510 aa9.54□□□□□ -0.88
CD46-205ENST00000358170 TRIM22Q8IYM9 498 aa9.54□□□□□ -0.88
CD46-205ENST00000358170 DPF2Q92785 391 aa9.54□□□□□ -0.88
CD46-205ENST00000358170 MRFAP1L1Q96HT8 127 aa9.54□□□□□ -0.88
CD46-205ENST00000358170 NACAP1Q9BZK3 213 aa9.54□□□□□ -0.88
CD46-205ENST00000358170 N4BP2Q86UW6 1770 aaPredicted RBP9.53□□□□□ -0.88
CD46-205ENST00000358170 GOLGB1Q14789 3259 aaKnown RBP9.53□□□□□ -0.88
CD46-205ENST00000358170 ZMYM6O95789 1325 aa9.53□□□□□ -0.88
CD46-205ENST00000358170 PATL2C9JE40 543 aaKnown RBP9.53□□□□□ -0.88
CD46-205ENST00000358170 POLR2DO15514 142 aaKnown RBP9.53□□□□□ -0.88
CD46-205ENST00000358170 UQCRFS1P1P0C7P4 283 aa9.53□□□□□ -0.88
CD46-205ENST00000358170 FANCCQ00597 558 aa9.53□□□□□ -0.88
CD46-205ENST00000358170 RTN1Q16799 776 aa9.53□□□□□ -0.88
CD46-205ENST00000358170 MTERF4Q7Z6M4 381 aaKnown RBP9.53□□□□□ -0.88
CD46-205ENST00000358170 CPLX3Q8WVH0 158 aa9.53□□□□□ -0.88
CD46-205ENST00000358170 FANCLQ9NW38 375 aa9.53□□□□□ -0.88
CD46-205ENST00000358170 KCNH3Q9ULD8 1083 aa9.53□□□□□ -0.88
CD46-205ENST00000358170 PCDHA5Q9Y5H7 936 aa9.53□□□□□ -0.88
CD46-205ENST00000358170 SCN11AQ9UI33 1791 aa9.53□□□□□ -0.88
CD46-205ENST00000358170 CPDO75976 1380 aa9.53□□□□□ -0.88
CD46-205ENST00000358170 CMA1P23946 247 aa9.53□□□□□ -0.88
CD46-205ENST00000358170 STX17P56962 302 aa9.53□□□□□ -0.88
CD46-205ENST00000358170 SART3Q15020 963 aaKnown RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms