RNA–Protein interactions for RNA: ENST00000354534.10

SCN8A-201, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN8A, Length 11,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-201ENST00000354534 RUFY4Q6ZNE9 571 aa8.95□□□□□ -0.98
SCN8A-201ENST00000354534 ERICH3Q5RHP9 1530 aa8.95□□□□□ -0.98
SCN8A-201ENST00000354534 E9PMD0 336 aa8.95□□□□□ -0.98
SCN8A-201ENST00000354534 DAB2P98082 770 aa8.95□□□□□ -0.98
SCN8A-201ENST00000354534 GOLGA6BA6NDN3 693 aa8.95□□□□□ -0.98
SCN8A-201ENST00000354534 SPOPO43791 374 aa8.95□□□□□ -0.98
SCN8A-201ENST00000354534 SNCBQ16143 134 aa8.95□□□□□ -0.98
SCN8A-201ENST00000354534 KMT5BQ4FZB7 885 aa8.95□□□□□ -0.98
SCN8A-201ENST00000354534 WAPLQ7Z5K2 1190 aa8.95□□□□□ -0.98
SCN8A-201ENST00000354534 TRPA1O75762 1119 aa8.95□□□□□ -0.98
SCN8A-201ENST00000354534 RAPGEF1Q13905 1077 aa8.95□□□□□ -0.98
SCN8A-201ENST00000354534 C16orf87Q6PH81 154 aa8.95□□□□□ -0.98
SCN8A-201ENST00000354534 CCDC124Q96CT7 223 aaKnown RBP8.95□□□□□ -0.98
SCN8A-201ENST00000354534 FAM180AQ6UWF9 173 aa8.95□□□□□ -0.98
SCN8A-201ENST00000354534 KIAA2013Q8IYS2 634 aa8.95□□□□□ -0.98
SCN8A-201ENST00000354534 LMOD1P29536 600 aaPredicted RBP8.95□□□□□ -0.98
SCN8A-201ENST00000354534 ARHGAP4P98171 946 aa8.95□□□□□ -0.98
SCN8A-201ENST00000354534 ARHGAP5Q13017 1502 aa8.95□□□□□ -0.98
SCN8A-201ENST00000354534 IFIT1P09914 478 aaKnown RBP8.95□□□□□ -0.98
SCN8A-201ENST00000354534 PRKG1Q13976 671 aa8.95□□□□□ -0.98
SCN8A-201ENST00000354534 DDX42Q86XP3 938 aaKnown RBP eCLIP8.95□□□□□ -0.98
SCN8A-201ENST00000354534 CFAP61Q8NHU2 1237 aa8.95□□□□□ -0.98
SCN8A-201ENST00000354534 ANKRD30BQ9BXX2 1392 aa8.95□□□□□ -0.98
SCN8A-201ENST00000354534 NBNO60934 754 aa8.95□□□□□ -0.98
SCN8A-201ENST00000354534 SLC12A2P55011 1212 aa8.95□□□□□ -0.98
SCN8A-201ENST00000354534 PPWD1Q96BP3 646 aaKnown RBP8.95□□□□□ -0.98
SCN8A-201ENST00000354534 EPS15L1Q9UBC2 864 aa8.95□□□□□ -0.98
SCN8A-201ENST00000354534 SMARCA5O60264 1052 aaPredicted RBP8.94□□□□□ -0.98
SCN8A-201ENST00000354534 TTC4O95801 387 aa8.94□□□□□ -0.98
SCN8A-201ENST00000354534 IARSP41252 1262 aaKnown RBP8.94□□□□□ -0.98
SCN8A-201ENST00000354534 PLCB4Q15147 1175 aa8.94□□□□□ -0.98
SCN8A-201ENST00000354534 DCAF17Q5H9S7 520 aaPredicted RBP8.94□□□□□ -0.98
SCN8A-201ENST00000354534 LGSNQ5TDP6 509 aa8.94□□□□□ -0.98
SCN8A-201ENST00000354534 KSR1Q8IVT5 923 aa8.94□□□□□ -0.98
SCN8A-201ENST00000354534 YY1AP1Q9H869 796 aa8.94□□□□□ -0.98
SCN8A-201ENST00000354534 KAT14Q9H8E8 782 aa8.94□□□□□ -0.98
SCN8A-201ENST00000354534 GSTA1P08263 222 aa8.94□□□□□ -0.98
SCN8A-201ENST00000354534 GSTA2P09210 222 aa8.94□□□□□ -0.98
SCN8A-201ENST00000354534 METAP2P50579 478 aaKnown RBP eCLIP8.94□□□□□ -0.98
SCN8A-201ENST00000354534 ANKRD20A4Q4UJ75 823 aa8.94□□□□□ -0.98
SCN8A-201ENST00000354534 ANKRD20A8PQ5CZ79 823 aa8.94□□□□□ -0.98
SCN8A-201ENST00000354534 ANKRD20A2Q5SQ80 823 aa8.94□□□□□ -0.98
SCN8A-201ENST00000354534 ANKRD20A1Q5TYW2 823 aa8.94□□□□□ -0.98
SCN8A-201ENST00000354534 FAM186BQ8IYM0 893 aa8.94□□□□□ -0.98
SCN8A-201ENST00000354534 ERMNQ8TAM6 284 aa8.94□□□□□ -0.98
SCN8A-201ENST00000354534 TRIM8Q9BZR9 551 aa8.94□□□□□ -0.98
SCN8A-201ENST00000354534 TATP17735 454 aaPredicted RBP8.94□□□□□ -0.98
SCN8A-201ENST00000354534 PPP2R1AP30153 589 aa8.94□□□□□ -0.98
SCN8A-201ENST00000354534 HDAC9Q9UKV0 1011 aa8.94□□□□□ -0.98
SCN8A-201ENST00000354534 BZW2Q9Y6E2 419 aaKnown RBP8.94□□□□□ -0.98
SCN8A-201ENST00000354534 MX1P20591 662 aa8.94□□□□□ -0.98
SCN8A-201ENST00000354534 ARHGAP44Q17R89 818 aa8.94□□□□□ -0.98
SCN8A-201ENST00000354534 SPC25Q9HBM1 224 aa8.94□□□□□ -0.98
SCN8A-201ENST00000354534 ANKRD50Q9ULJ7 1429 aa8.94□□□□□ -0.98
SCN8A-201ENST00000354534 MICU3Q86XE3 530 aa8.94□□□□□ -0.98
SCN8A-201ENST00000354534 KRT82Q9NSB4 513 aa8.94□□□□□ -0.98
SCN8A-201ENST00000354534 BTBD11A6QL63 1104 aa8.94□□□□□ -0.98
SCN8A-201ENST00000354534 CCDC85BQ15834 202 aaPredicted RBP8.94□□□□□ -0.98
SCN8A-201ENST00000354534 RNF41Q9H4P4 317 aaPredicted RBP8.94□□□□□ -0.98
SCN8A-201ENST00000354534 HFM1A2PYH4 1435 aa8.94□□□□□ -0.98
SCN8A-201ENST00000354534 TRIM56Q9BRZ2 755 aaKnown RBP8.94□□□□□ -0.98
SCN8A-201ENST00000354534 CECR2Q9BXF3 1484 aa8.94□□□□□ -0.98
SCN8A-201ENST00000354534 MAP3K12Q12852 859 aa8.93□□□□□ -0.98
SCN8A-201ENST00000354534 SKAP1Q86WV1 359 aa8.93□□□□□ -0.98
SCN8A-201ENST00000354534 EXOC6BQ9Y2D4 811 aa8.93□□□□□ -0.98
SCN8A-201ENST00000354534 TDRD9Q8NDG6 1382 aaKnown RBP8.93□□□□□ -0.98
SCN8A-201ENST00000354534 NEK2P51955 445 aa8.93□□□□□ -0.98
SCN8A-201ENST00000354534 TMEM259Q4ZIN3 620 aa8.93□□□□□ -0.98
SCN8A-201ENST00000354534 KIFAP3Q92845 792 aa8.93□□□□□ -0.98
SCN8A-201ENST00000354534 PAIP2BQ9ULR5 123 aaKnown RBP8.93□□□□□ -0.98
SCN8A-201ENST00000354534 USP16Q9Y5T5 823 aa8.93□□□□□ -0.98
SCN8A-201ENST00000354534 SLC9A5Q14940 896 aa8.93□□□□□ -0.98
SCN8A-201ENST00000354534 CTAGE3PQ8IX95 158 aa8.93□□□□□ -0.98
SCN8A-201ENST00000354534 ANKRD42Q8N9B4 389 aa8.93□□□□□ -0.98
SCN8A-201ENST00000354534 HELLSQ9NRZ9 838 aa8.93□□□□□ -0.98
SCN8A-201ENST00000354534 ASIC3Q9UHC3 531 aa8.93□□□□□ -0.98
SCN8A-201ENST00000354534 DAPK1P53355 1430 aa8.93□□□□□ -0.98
SCN8A-201ENST00000354534 ZSCAN26Q16670 478 aa8.93□□□□□ -0.98
SCN8A-201ENST00000354534 TMEM132EQ6IEE7 984 aa8.93□□□□□ -0.98
SCN8A-201ENST00000354534 ARMC9Q7Z3E5 817 aa8.93□□□□□ -0.98
SCN8A-201ENST00000354534 RPGRQ92834 1020 aaKnown RBP8.93□□□□□ -0.98
SCN8A-201ENST00000354534 RNF40O75150 1001 aa8.93□□□□□ -0.98
SCN8A-201ENST00000354534 ASIC1P78348 528 aa8.93□□□□□ -0.98
SCN8A-201ENST00000354534 GLRX3O76003 335 aaKnown RBP8.93□□□□□ -0.98
SCN8A-201ENST00000354534 KIF22Q14807 665 aa8.93□□□□□ -0.98
SCN8A-201ENST00000354534 UBL4BQ8N7F7 174 aa8.93□□□□□ -0.98
SCN8A-201ENST00000354534 DNAJC25Q9H1X3 360 aa8.93□□□□□ -0.98
SCN8A-201ENST00000354534 ATG3Q9NT62 314 aa8.93□□□□□ -0.98
SCN8A-201ENST00000354534 NKTRP30414 1462 aaKnown RBP8.93□□□□□ -0.98
SCN8A-201ENST00000354534 CALM1P0DP23 149 aa8.93□□□□□ -0.98
SCN8A-201ENST00000354534 CALM2P0DP24 149 aa8.93□□□□□ -0.98
SCN8A-201ENST00000354534 CALM3P0DP25 149 aa8.93□□□□□ -0.98
SCN8A-201ENST00000354534 PPP2R5AQ15172 486 aa8.93□□□□□ -0.98
SCN8A-201ENST00000354534 NR1H4Q96RI1 486 aaPredicted RBP8.93□□□□□ -0.98
SCN8A-201ENST00000354534 ZSCAN16Q9H4T2 348 aaPredicted RBP8.93□□□□□ -0.98
SCN8A-201ENST00000354534 VEZTQ9HBM0 779 aa8.93□□□□□ -0.98
SCN8A-201ENST00000354534 NFKBIL1Q9UBC1 381 aaPredicted RBP8.93□□□□□ -0.98
SCN8A-201ENST00000354534 NBPF10Q6P3W6 841 aaKnown RBP8.93□□□□□ -0.98
SCN8A-201ENST00000354534 KCNA4P22459 653 aa8.93□□□□□ -0.98
SCN8A-201ENST00000354534 CEP70Q8NHQ1 597 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms