RNA–Protein interactions for RNA: ENST00000348264.6

CLCC1-202, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-202ENST00000348264 NFIAQ12857 509 aa16.42■□□□□ 0.22
CLCC1-202ENST00000348264 PI16Q6UXB8 463 aa16.42■□□□□ 0.22
CLCC1-202ENST00000348264 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.42■□□□□ 0.22
CLCC1-202ENST00000348264 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.42■□□□□ 0.22
CLCC1-202ENST00000348264 ELP3Q9H9T3 547 aa16.42■□□□□ 0.22
CLCC1-202ENST00000348264 MANSC4A6NHS7 340 aaPredicted RBP16.41■□□□□ 0.22
CLCC1-202ENST00000348264 VGLL4Q14135 290 aa16.41■□□□□ 0.22
CLCC1-202ENST00000348264 ZGPATQ8N5A5 531 aaKnown RBP16.41■□□□□ 0.22
CLCC1-202ENST00000348264 CNKSR2Q8WXI2 1034 aa16.41■□□□□ 0.22
CLCC1-202ENST00000348264 R3HDMLQ9H3Y0 253 aa16.41■□□□□ 0.22
CLCC1-202ENST00000348264 ABCF2Q9UG63 623 aa16.41■□□□□ 0.22
CLCC1-202ENST00000348264 MYO5AQ9Y4I1 1855 aaKnown RBP16.41■□□□□ 0.22
CLCC1-202ENST00000348264 GAKO14976 1311 aa16.41■□□□□ 0.22
CLCC1-202ENST00000348264 RFX7Q2KHR2 1363 aa16.4■□□□□ 0.22
CLCC1-202ENST00000348264 IGF2BP3O00425 579 aaKnown RBP eCLIP16.4■□□□□ 0.22
CLCC1-202ENST00000348264 ARID4AP29374 1257 aaPredicted RBP16.4■□□□□ 0.22
CLCC1-202ENST00000348264 DZIP1Q86YF9 867 aaKnown RBP16.4■□□□□ 0.22
CLCC1-202ENST00000348264 IFNL1Q8IU54 200 aa16.4■□□□□ 0.22
CLCC1-202ENST00000348264 OPTNQ96CV9 577 aa16.4■□□□□ 0.22
CLCC1-202ENST00000348264 HMG20BQ9P0W2 317 aa16.4■□□□□ 0.22
CLCC1-202ENST00000348264 MAST2Q6P0Q8 1798 aa16.4■□□□□ 0.22
CLCC1-202ENST00000348264 SURF6O75683 361 aaKnown RBP16.39■□□□□ 0.21
CLCC1-202ENST00000348264 MAP3K9P80192 1104 aa16.39■□□□□ 0.21
CLCC1-202ENST00000348264 TCP10Q12799 353 aa16.39■□□□□ 0.21
CLCC1-202ENST00000348264 OS9Q13438 667 aaPredicted RBP16.39■□□□□ 0.21
CLCC1-202ENST00000348264 TNNI3KQ59H18 835 aa16.39■□□□□ 0.21
CLCC1-202ENST00000348264 GORABQ5T7V8 394 aa16.39■□□□□ 0.21
CLCC1-202ENST00000348264 CEP85Q6P2H3 762 aa16.39■□□□□ 0.21
CLCC1-202ENST00000348264 ZNF384Q8TF68 577 aa16.39■□□□□ 0.21
CLCC1-202ENST00000348264 ZNF296Q8WUU4 475 aaPredicted RBP16.39■□□□□ 0.21
CLCC1-202ENST00000348264 FAM151AQ8WW52 585 aa16.39■□□□□ 0.21
CLCC1-202ENST00000348264 CFHR5Q9BXR6 569 aa16.39■□□□□ 0.21
CLCC1-202ENST00000348264 USP40Q9NVE5 1235 aa16.39■□□□□ 0.21
CLCC1-202ENST00000348264 FAM198AQ9UFP1 575 aa16.39■□□□□ 0.21
CLCC1-202ENST00000348264 FPGT-TNNI3KV9GXZ4 949 aa16.39■□□□□ 0.21
CLCC1-202ENST00000348264 HTTP42858 3142 aa16.39■□□□□ 0.21
CLCC1-202ENST00000348264 MCAMP43121 646 aa16.38■□□□□ 0.21
CLCC1-202ENST00000348264 SPATA5Q8NB90 893 aa16.38■□□□□ 0.21
CLCC1-202ENST00000348264 WRNIP1Q96S55 665 aa16.38■□□□□ 0.21
CLCC1-202ENST00000348264 GPR108Q9NPR9 543 aa16.38■□□□□ 0.21
CLCC1-202ENST00000348264 NOP58Q9Y2X3 529 aaKnown RBP16.38■□□□□ 0.21
CLCC1-202ENST00000348264 CSADQ9Y600 493 aa16.38■□□□□ 0.21
CLCC1-202ENST00000348264 SNCAIPQ9Y6H5 919 aa16.38■□□□□ 0.21
CLCC1-202ENST00000348264 GPR25O00155 361 aa16.37■□□□□ 0.21
CLCC1-202ENST00000348264 INHBEP58166 350 aa16.37■□□□□ 0.21
CLCC1-202ENST00000348264 MECOMQ03112 1051 aa16.37■□□□□ 0.21
CLCC1-202ENST00000348264 NOM1Q5C9Z4 860 aaKnown RBP16.37■□□□□ 0.21
CLCC1-202ENST00000348264 SPTY2D1Q68D10 685 aaPredicted RBP16.37■□□□□ 0.21
CLCC1-202ENST00000348264 TBC1D9Q6ZT07 1266 aa16.37■□□□□ 0.21
CLCC1-202ENST00000348264 MIGA2Q7L4E1 593 aa16.37■□□□□ 0.21
CLCC1-202ENST00000348264 ZFPM1Q8IX07 1006 aa16.37■□□□□ 0.21
CLCC1-202ENST00000348264 DBNDD2Q9BQY9 259 aa16.37■□□□□ 0.21
CLCC1-202ENST00000348264 MROH7-TTC4A0A0A0MT08 1334 aa16.37■□□□□ 0.21
CLCC1-202ENST00000348264 CCDC85CA6NKD9 419 aa16.36■□□□□ 0.21
CLCC1-202ENST00000348264 ALDH1A1P00352 501 aa16.36■□□□□ 0.21
CLCC1-202ENST00000348264 BTDP43251 543 aa16.36■□□□□ 0.21
CLCC1-202ENST00000348264 RGS3P49796 1198 aa16.36■□□□□ 0.21
CLCC1-202ENST00000348264 DCAF15Q66K64 600 aa16.36■□□□□ 0.21
CLCC1-202ENST00000348264 ERICH6Q7L0X2 663 aa16.36■□□□□ 0.21
CLCC1-202ENST00000348264 CTU1Q7Z7A3 348 aaKnown RBP16.36■□□□□ 0.21
CLCC1-202ENST00000348264 ZKSCAN4Q969J2 545 aaPredicted RBP16.36■□□□□ 0.21
CLCC1-202ENST00000348264 HOOK2Q96ED9 719 aa16.36■□□□□ 0.21
CLCC1-202ENST00000348264 OTUD5Q96G74 571 aa16.36■□□□□ 0.21
CLCC1-202ENST00000348264 FAM163AQ96GL9 167 aaPredicted RBP16.36■□□□□ 0.21
CLCC1-202ENST00000348264 MS4A4AQ96JQ5 239 aa16.36■□□□□ 0.21
CLCC1-202ENST00000348264 PTPN18Q99952 460 aa16.36■□□□□ 0.21
CLCC1-202ENST00000348264 TLR7Q9NYK1 1049 aaKnown RBP16.36■□□□□ 0.21
CLCC1-202ENST00000348264 ATRNL1Q5VV63 1379 aa16.36■□□□□ 0.21
CLCC1-202ENST00000348264 TESPA1A2RU30 521 aaPredicted RBP16.35■□□□□ 0.21
CLCC1-202ENST00000348264 SPDYE5A6NIY4 337 aa16.35■□□□□ 0.21
CLCC1-202ENST00000348264 UQCRFS1P1P0C7P4 283 aa16.35■□□□□ 0.21
CLCC1-202ENST00000348264 INPP5BP32019 993 aa16.35■□□□□ 0.21
CLCC1-202ENST00000348264 SLF2Q8IX21 1173 aa16.35■□□□□ 0.21
CLCC1-202ENST00000348264 BRI3BPQ8WY22 251 aa16.35■□□□□ 0.21
CLCC1-202ENST00000348264 NSUN4Q96CB9 384 aaKnown RBP16.35■□□□□ 0.21
CLCC1-202ENST00000348264 IDI2Q9BXS1 227 aa16.35■□□□□ 0.21
CLCC1-202ENST00000348264 ZNF341Q9BYN7 854 aa16.35■□□□□ 0.21
CLCC1-202ENST00000348264 DDX4Q9NQI0 724 aaKnown RBP16.35■□□□□ 0.21
CLCC1-202ENST00000348264 DBNLQ9UJU6 430 aaKnown RBP16.35■□□□□ 0.21
CLCC1-202ENST00000348264 RCAN3Q9UKA8 241 aa16.35■□□□□ 0.21
CLCC1-202ENST00000348264 CDK5RAP2Q96SN8 1893 aa16.35■□□□□ 0.21
CLCC1-202ENST00000348264 WDHD1O75717 1129 aaPredicted RBP16.34■□□□□ 0.21
CLCC1-202ENST00000348264 TTC39AQ5SRH9 613 aa16.34■□□□□ 0.21
CLCC1-202ENST00000348264 SNRKQ9NRH2 765 aa16.34■□□□□ 0.21
CLCC1-202ENST00000348264 EXOC6BQ9Y2D4 811 aa16.34■□□□□ 0.21
CLCC1-202ENST00000348264 COG6Q9Y2V7 657 aa16.34■□□□□ 0.21
CLCC1-202ENST00000348264 GPR75-ASB3A0A0A6YYF3 556 aa16.33■□□□□ 0.2
CLCC1-202ENST00000348264 CCL15-CCL14A0A0B4J2E2 113 aa16.33■□□□□ 0.2
CLCC1-202ENST00000348264 FKTNO75072 461 aa16.33■□□□□ 0.2
CLCC1-202ENST00000348264 ENTPD3O75355 529 aa16.33■□□□□ 0.2
CLCC1-202ENST00000348264 MS4A1P11836 297 aa16.33■□□□□ 0.2
CLCC1-202ENST00000348264 RHBDL3P58872 404 aa16.33■□□□□ 0.2
CLCC1-202ENST00000348264 CRHR2Q13324 411 aa16.33■□□□□ 0.2
CLCC1-202ENST00000348264 CCL15Q16663 113 aa16.33■□□□□ 0.2
CLCC1-202ENST00000348264 SH3BP5LQ7L8J4 393 aa16.33■□□□□ 0.2
CLCC1-202ENST00000348264 ERO1BQ86YB8 467 aa16.33■□□□□ 0.2
CLCC1-202ENST00000348264 EAF2Q96CJ1 260 aaPredicted RBP16.33■□□□□ 0.2
CLCC1-202ENST00000348264 RAI14Q9P0K7 980 aa16.33■□□□□ 0.2
CLCC1-202ENST00000348264 ZNF112Q9UJU3 913 aa16.33■□□□□ 0.2
CLCC1-202ENST00000348264 DOCK1Q14185 1865 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms